Actinomyces israelii: AIF0345_0188
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Entry
AIF0345_0188 CDS
T06659
Symbol
udgB
Name
(GenBank) Type-5 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
air
Actinomyces israelii
Pathway
air03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
air00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AIF0345_0188 (udgB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
air03400
]
AIF0345_0188 (udgB)
Enzymes [BR:
air01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AIF0345_0188 (udgB)
DNA repair and recombination proteins [BR:
air03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AIF0345_0188 (udgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WKR20317
LinkDB
All DBs
Position
226889..227728
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AA seq
279 aa
AA seq
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MDPHPLTGTGFESPVPPGTGWPGDPADADTPVARSAGDVARLARQARDAAALDALISVCR
ACPRLVAWREDVATTSRRAAFAHEPYWGRPVPSVGPADARIYVVGLAPAANGANRTGRMF
TGDRSGDWLWAALHRAGLATRDSSRCAGDGQEPIGLRLGAAVRCAPPANKPTTAEKGACL
PWIARELALMPRVRVLVALGGIAWDTALRVVRRAGWGVPRPKPRFGHGAEAALTRPDGNE
VVLLGSYHPSQQNTFTGRLTEDMLDAVLARAEDLAGSAA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcatccgctgaccggcacgggcttcgaatcgcccgtacctcccggcaccggc
tggcccggcgatcccgcggacgccgacacgcccgtggcgcgctcggccggcgacgtcgcg
cgcctggcgcgtcaggcccgcgatgccgccgccctcgacgccctgatcagcgtgtgccgc
gcctgcccccgtctggtggcgtggcgggaggacgtcgccacgaccagccgccgtgccgcc
ttcgcccacgagccctactgggggcgccccgtgccgagcgtcgggccggcggacgcacgg
atctacgtcgtcggactggcacccgcggccaacggcgcgaaccgcaccggccgcatgttc
accggggacaggtccggcgactggctgtgggccgccctccaccgcgcgggcctggccacc
cgggactcctcccggtgcgccggagacgggcaggagccgatcggtctgcgactgggcgcg
gcggtgcggtgcgccccgccggccaacaagccgacgacggcggagaagggcgcctgcctg
ccgtggatcgcccgcgagctcgcgctcatgccgcgggtgcgcgtgctggtcgcgctcggc
ggcatcgcctgggacacggcgctgcgagtcgtgcgccgggcggggtggggcgtgccccgg
cccaagccccgtttcgggcacggcgccgaggccgccctcacgcgtcccgacgggaacgag
gtcgtgctgctgggcagctaccaccccagccagcagaacaccttcaccggtcggctcacc
gaggacatgctcgacgccgtgctcgcgcgggccgaggacctggccgggtcggcggcatga
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