Actinomyces israelii: AIF0345_1013
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Entry
AIF0345_1013 CDS
T06659
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
air
Actinomyces israelii
Pathway
air03420
Nucleotide excision repair
air03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
air00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AIF0345_1013 (uvrD1)
03430 Mismatch repair
AIF0345_1013 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
air03400
]
AIF0345_1013 (uvrD1)
Enzymes [BR:
air01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AIF0345_1013 (uvrD1)
DNA repair and recombination proteins [BR:
air03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AIF0345_1013 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
AIF0345_1013 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_30
AAA_12
MlaD
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
WKR21115
LinkDB
All DBs
Position
1215946..1218924
Genome browser
AA seq
992 aa
AA seq
DB search
MNATNSLFGGLPMPGHGTGSTPPPEAVLPSLTPADDWPGGAWADAEPPDEDDGYDGYDDD
PAVFVPSQQDQAEADAWENRQHEAAALVARAQAGAAAARARSGEAGTVPSAPSPSSYAPG
APARGVTVADPADLLTGLNPAQARAVTHAGSPLLIIAGAGSGKTRVLTHRIAHLIATGRA
RPGEILAITFTNKAAAEMRERVTALVGPAGERMWVSTFHSACVRILRREHDAAGLRSTFS
IYDAADSTRLVTLIVRELGIDPKRFTPKTFAHRISDLKNELVTPAQYAERAVTSNPLDRH
LTEVYRAYAERLAAANALDFDDLIMRTVQLLQTRPAVAEMYRRRFRHVLVDEYQDTNHAQ
YVLVRELVGGPGTSGAGSPVPPGELTVVGDSDQSIYAFRGATIRNIEEFEQDYPSARTIL
LEQNYRSTQNILSAANAVISRNSGRREKNLWTDSGDGPAIVGYVADSEHDEARWISQEID
RLSDVEGVRPRDVAVFYRTNSQSRALEEAFLRSGQPYKVVGGTRFYERREIKDAIAYLRA
IDNPDDDVNLRRILNVPKRGLGDKAESVLAEHAARHGVSFGTAIADAAGAMRPADEGDAA
GDLDAPGQGPPAVEGLTARARTQATRFHELLASLRGRLTEGDGVSDLLDSALDASGYLAE
LRASDDPQDATRVENLAELHSVASDFQAANPEGTLADFLERVSLVADSDQLPPSADLAAM
SEGERAAAAAAEEQGQVTLMTVHTAKGLEFPVVFVTGMEDGTFPHSRALAEDAELAEERR
LAYVALTRARQRLYVTRAAVRSAWGAASAMPASRFLDDIPAETMEWKRIASSMDALRGGG
TGWGSGWGEGGFASGRGPYGGRGGPGGREADDDDFAPAIGSGRRGGGRPKRLGRVETPKD
RAEARRAKRLAARGKPVRLDGSGDADSDSAALPEAVAGLKAGDRVRHTSYGVGAVVGLEG
SGRSTVARVEFTIDGAAVTKRLMLRLAPITRA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacgaactccctcttcggtggactgcccatgcccggccacggcaccggctcc
acgcccccgcccgaggcggtactgccctcgctgacgcccgccgacgactggccgggcggc
gcctgggccgacgccgagccgccagacgaggacgacggctatgacggctatgacgacgac
cccgccgtcttcgtcccctcccagcaggaccaggccgaggccgacgcctgggagaaccgg
cagcacgaggccgccgcgctcgtcgcccgggcccaggcgggggcggccgcggcccgcgcc
cgcagcggcgaggccggcaccgtgccctcagcgccgtcgccgtcgtcgtacgcccccggc
gcccccgcgcggggcgtgaccgtggccgaccccgcggacctcctgaccggcctcaacccg
gcccaggcgcgggccgtcacccacgccggaagcccgctgctcattatcgccggagccggc
agcggcaagacccgggtactgacccaccgcatcgcccacctcatcgccaccggccgcgcc
cgccccggcgagattctcgccatcaccttcaccaacaaggccgccgccgagatgcgcgag
cgcgtcaccgccctggtgggccccgccggggagcgcatgtgggtctccaccttccactcc
gcctgcgtgcgcatcctgcgccgcgagcacgacgccgccggcctgcgctccaccttctcc
atctacgacgccgccgactccacccgcctggtcaccctcatcgtgcgcgagctcggcatc
gaccccaagcgcttcacccccaagaccttcgcccaccgcatctccgacctgaagaacgag
ctggtcacccccgcccagtacgcggagagggctgtcacctccaacccgttggaccgccac
ctgactgaggtctaccgcgcctacgccgagcgcctggccgccgccaacgccctggacttc
gacgacctcatcatgcgcacggtccagctcctccagacccggcccgccgtggccgagatg
taccggcgccggttccgccacgtgctcgtcgacgagtaccaggacaccaaccacgcccag
tacgtgctcgtgcgcgagctcgtcggcgggcccgggacctcgggcgccggcagccccgtc
ccacccggcgagctcaccgtcgtcggcgactccgaccagtccatctacgccttccgcggc
gccaccatccgcaatatcgaggagttcgagcaggactaccccagtgcccgcaccatcctg
ctggagcagaactaccgctccacccagaacatcctgagcgccgccaacgccgtcatctcc
cgcaactccgggcgccgggagaagaacctgtggaccgactccggcgacgggcccgcgatc
gtcggctacgtcgccgactccgagcacgacgaggcccgctggatcagccaggagatcgac
cgcctgtccgacgtcgagggcgtgcgcccccgcgacgtcgccgtcttctaccgcaccaac
tcccagtcacgcgccctggaggaggccttcctgcgctccggccagccatacaaggtcgtc
ggcggcacccgcttctacgagcgccgcgagatcaaggacgccatcgcctacctgcgcgcc
attgacaaccccgacgacgacgtcaacctgcgccgcatcctcaacgtccccaagcgcggc
ctgggggacaaggcggagtcggtcctggccgagcacgccgcccgccacggagtctccttc
ggcaccgccatcgccgacgccgccggggcgatgcgcccggccgacgagggcgacgccgcc
ggggacctggacgcacccggccaggggccgcccgccgtcgagggcctgaccgcccgcgcc
cgcacccaggcgacccgcttccacgagctgctcgcctccctgcgcggccggctcaccgag
ggcgacggcgtctccgacctcctggactccgccctggacgcctccggctacctcgccgag
ctgcgcgccagcgacgacccgcaggacgccacgcgcgtggagaacctcgccgagctccac
tcggtggcctccgacttccaggccgccaaccccgagggcaccctggcggacttcctggag
cgggtcagccttgtggcggactccgaccagctgccgccgtcggccgacctcgccgccatg
tccgagggggagcgggcggccgcggccgccgccgaggagcaggggcaggtcaccctcatg
accgtccacaccgccaagggactggagttcccggtcgtcttcgtcaccggcatggaggac
ggcaccttcccgcactcgcgcgccctggccgaggacgccgagctcgccgaggagcgccgc
ctggcctacgtggccctcacccgcgcccgccagcgcctctacgtcacccgcgccgccgtg
cgcagcgcctggggcgccgccagcgccatgcccgcctcccgattcctggacgacatcccc
gccgagaccatggagtggaagcgcatcgcctcctccatggacgcgctgcgcggcggcggc
accggctgggggagcggctggggcgagggcggcttcgcctccgggcgcgggccctacggc
ggccggggcgggccgggcgggagggaggcggacgacgacgacttcgcaccggccattggc
tcggggcggcggggcggcggccggccgaagcggctcgggcgggtcgagacccccaaggac
cgggccgaggcgaggcgcgccaagcgcctggccgcccgcggcaagccggtgcggctcgac
ggcagcggcgacgcggactcggactccgcggccctgccagaggcggtggccggcctcaag
gccggcgaccgggtgcggcacacgtcctacggggtgggcgccgtcgtcggcctggaggga
tcggggcgctccacagtggcgcgcgtcgagttcaccatcgacggcgctgcggtcaccaag
cgcctcatgctgcgcctggccccgatcacccgggcctga
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