Actinomyces israelii: AIF0345_1988
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Entry
AIF0345_1988 CDS
T06659
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
air
Actinomyces israelii
Pathway
air03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
air00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AIF0345_1988 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
air03400
]
AIF0345_1988 (fpg1)
Enzymes [BR:
air01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AIF0345_1988 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AIF0345_1988 (fpg1)
DNA repair and recombination proteins [BR:
air03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AIF0345_1988 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
Gln-synt_N_2
DZR
RNHCP
Motif
Other DBs
NCBI-ProteinID:
WKR22051
LinkDB
All DBs
Position
complement(2393503..2394531)
Genome browser
AA seq
342 aa
AA seq
DB search
MPELPEVESVRAGLARHLTGRTIGDVEVLDARSVRRQDGGPEAFASLLTGRTVTAAVRRG
KFLWLALDDGRALSAHLGMSGQVLVRGTAAGRPPGTGPARRPGAADTRGGRRADLTALRA
PSLVRGLSARPRHLRVRLRLAPVDGDVPGGAAVDLVDQRMFGGLRVTDLVPTPDGAPGGA
GSPDALLPADAAHIARDLLDPALDRSGVVARVRSSGRAVKTILLDQRVVSGIGNIYADEG
LWAARLHGLRPGSRLGPRVAARLLERTAAVMERALAAGGTSFDALYVDADGAAGFFAREL
AAYGRAGLPCRRCGAAMRVESVGGRSHTSCPRCQTRPRRRRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttccggaggtcgagtccgtgcgcgccgggctcgcccgccacctgaccggc
cgcacgatcggcgacgtcgaggtcctcgacgcgcgctccgtgcgccggcaggacggcggc
cccgaggccttcgcgagcctgctcaccgggaggacggtgaccgcggccgtgcgccggggc
aagttcctgtggctggcgctggacgacggccgcgcgctgtccgcccacctcggcatgagc
ggccaggtcctcgtgcgcggcaccgccgcggggcggcctcccggcaccggtcccgcccgc
cgcccgggcgcagcggacacccgcggcggccggcgcgccgacctgacggcgctgcgcgcc
ccgagcctcgtgcgcgggctgtccgcccggccgcgccacctgcgcgtgcgcctgcgcctg
gcgcccgtcgacggtgacgtccccggcggcgccgccgtcgacctggtcgaccagcgcatg
ttcggcggcctgcgcgtgaccgatctggtgccgacgcccgacggggcgccgggcggggcg
ggcagcccggacgccctcctgcccgccgacgccgcccacatcgcccgcgacctgctcgac
cccgcgctcgaccggagcggtgtcgtggcccgggtgcgctcctcgggccgcgccgtcaag
accattctgctggaccagcgggtcgtgtcgggcatcggcaacatctacgccgacgagggc
ctgtgggccgcccgcctccacggcctgcggcccggcagccggttgggcccgcgcgtggcc
gcgcgcctgctggagcggaccgcggccgtcatggagcgggcgctggccgccgggggcacg
agcttcgacgccctgtacgtcgacgccgacggcgccgccggcttcttcgcccgcgagctc
gcggcctacgggcgcgccgggctgccctgcaggcggtgcggggcggccatgcgcgtggag
agcgtcggcgggcgcagccacacgtcctgcccgaggtgccagacgcgcccgcggcgccga
cgccgctga
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