Actinomyces israelii: AIF0345_2027
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Entry
AIF0345_2027 CDS
T06659
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
air
Actinomyces israelii
Pathway
air03030
DNA replication
air03430
Mismatch repair
air03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
air00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AIF0345_2027 (dnaE1)
03430 Mismatch repair
AIF0345_2027 (dnaE1)
03440 Homologous recombination
AIF0345_2027 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
air03032
]
AIF0345_2027 (dnaE1)
03400 DNA repair and recombination proteins [BR:
air03400
]
AIF0345_2027 (dnaE1)
Enzymes [BR:
air01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AIF0345_2027 (dnaE1)
DNA replication proteins [BR:
air03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AIF0345_2027 (dnaE1)
DNA repair and recombination proteins [BR:
air03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AIF0345_2027 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF7311
MCM10_OB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WKR22087
LinkDB
All DBs
Position
complement(2436064..2439672)
Genome browser
AA seq
1202 aa
AA seq
DB search
MADKSSEGTQDAPRDDFVHLHVHTDYSMLDGAGKIKDYVAEAKRLGQPALAITDHGYMFG
AYEFYAAATAAGIKPIIGVEAYMTPGTSRFDKTRVFWGEESQRGDDVSARGSYTHMTLLS
RTNEGLHNLMRMDSYASLEGQWGKAPRIDRELLSRYSAGLIGSTGCPSSEVQTRLRLGQW
DEALRAAGELQDIFGKEFFYVELMDHGLEIERRVTKDLLRLAETLGAPLLATNDSHYVRP
EDRTIQDAMLCINSGSVLTDPDRFKFDGDTYYLRPGREMRELFSEMPGACDNTLLVAEQC
DVHFATVDEGASFMPVFPVPEGETMESWFIAECWRGMERRFGGDIPEDCRKQAEYEIGVI
VQMGFPGYFLVVADYINWAKAQGIRVGPGRGSGAGSMVAYAMGITELNPLRHGLIFERFL
NPERISMPDIDVDFDERRRDEVIEYVKRKYGSDKVSQVVTYGVIKAKQSLKDSSRVMGYP
YAVGDRLTKAMPPTIMGKDISIKGMFNPADERYGEAQQFRELHAEDPDAQKIVELAGGLE
GMTRQWGVHACAVIMSSATLTDIIPMMQRLQDGAYITQFDYPTCEHLGLLKMDFLGLRNL
TVISDALEGIVANGKEPLDIDHVELDDRATYELLSRGETLGVFQLDGGGMRTLLRLMKPD
NFEDISAVGALYRPGPMGAESHTNYALRKNGLQEITPIHPELKEALEPILGTTHGLIVYQ
EQVMKIATDLAGFSMGKADALRKAMGKKKMDILAKMFVEFEAGMVEGGFSKESVKTLWDV
VVPFAKYAFNKAHSAAYGVVSYWTAYLKTHYPTEYMAALLTSQKDNKDKLAVYLGECRHM
GITVLPPDVNASRAQFSADGESIRFGLAAVRNVGLNVVDAIVAAREDKGEFTSFEDFLDK
VPAVVCNKRTIDSLIKAGAFDTLGRTRRALQACHEDFVDEIIGVKRNEAAGQFDLFASLM
GGDAMEGAGGAPSPFGSGPVFSSEVPDLPEWDKKDKLAYERDMLGLYVSDHPLLGLEGVL
GKLADTEIADLVEDEERPDGAMVTIAGLITGLTRKTTKQGNLWAIAQIEDLGGSIEALFF
PSTYQTVSTMLAPDTVVTVRGRLNRRDGQVALYAQEMTLPDVSSAAHEAVTITLPTNRCT
APLVERFKAVLENHPGMSTVRLNLTSPGREVRTQLDSSLRVEASAAFYSDIKALLGPGCL
RR
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagagcagcgagggcacccaggacgcacccagggacgacttcgtccacctt
cacgtccacaccgactactccatgctcgacggcgcgggcaagatcaaggactacgtcgcc
gaggccaagcggctgggccagccggccctggcgatcaccgaccacggctacatgttcggc
gcctacgagttctacgcggccgccacggccgccggcatcaagccgatcatcggcgtggag
gcctacatgaccccgggcacctcccgcttcgacaagaccagagtcttctggggggaggag
tcccagcgcggcgacgacgtgtccgcccgcggctcctacacccacatgacgctgctctcg
cgcaccaacgagggcctgcacaacctcatgcgcatggactcctacgcctccctggagggc
cagtggggcaaggccccgcgcatcgaccgcgagctgctctcccgctactcggcgggcctg
atcggctccaccggctgcccctcctccgaggtccagacgcgcctgcgcctgggccagtgg
gacgaggcgctgcgcgccgccggggagctgcaggacatcttcggcaaggagttcttctac
gtcgagctcatggaccacggcctggagatcgagcggcgggtcaccaaggacctgctgcgc
ctggccgagacgctcggcgccccgctgctggcgaccaacgactcccactacgtgcgcccc
gaggaccgcaccatccaggacgccatgctgtgcatcaactccggctcggtgctcaccgac
cccgaccgcttcaagttcgacggggacacctactacctgcggcccgggcgggagatgcgc
gagctcttctccgagatgccgggcgcctgcgacaacaccctcctggtggccgagcagtgc
gacgtccacttcgccaccgtcgatgagggcgcctccttcatgccggtcttccccgtcccc
gagggcgagaccatggagtcctggttcatcgccgagtgctggcggggcatggagcgccgc
ttcggcggcgacatccccgaggactgccgcaagcaggccgagtacgagatcggcgtcatc
gtgcagatggggttccccggctacttcctggtggtcgccgactacatcaactgggccaag
gcccagggcatccgcgtggggcccgggcgcgggtccggcgccgggtccatggtcgcctac
gccatgggcatcaccgagctcaaccccctgcgccacgggctcatcttcgagcgcttcctc
aaccccgagcgcatctccatgcccgacatcgacgtcgacttcgacgagcgccggcgcgac
gaggtcatcgagtacgtcaagcgcaagtacggctcggacaaggtcagccaggtcgtcacc
tacggcgtcatcaaggccaagcagtccctgaaggactccagccgcgtcatgggctacccc
tacgcggtgggcgaccggctcaccaaggccatgccaccgaccattatgggcaaggacatc
tccatcaagggcatgttcaaccccgccgacgagcgctacggggaggcccagcagttccgc
gagctgcacgccgaggaccccgacgcccagaagatcgtcgagctcgccggcggcctggag
ggcatgacccgccagtggggcgtgcacgcctgcgccgtcatcatgtcctcggcgaccctg
accgacatcatccccatgatgcagcgcctccaggacggcgcctacatcacccagttcgac
taccccacctgcgagcacctgggcctgctcaagatggacttcctggggctgcgcaacctg
accgtcatctccgacgccctggagggcatcgtcgccaacggcaaggagccgctggacatc
gaccacgtcgagctggacgaccgggccacctacgagctgctctcgcgcggcgagaccctg
ggcgtcttccagctcgacggcggcggcatgcgcaccctgctgcggctgatgaagccggac
aacttcgaggacatctccgccgtcggcgccctgtaccgccccggccccatgggcgcggag
tcccacaccaactacgccctgcgcaagaacggcctgcaggagatcacgcccatccacccc
gagctcaaggaggccctggagccgatcctgggaaccacccacggcctgatcgtctaccag
gagcaggtcatgaagatcgccaccgacctggcgggcttctccatgggcaaggccgatgcg
ctgcgcaaggccatgggcaagaagaagatggacatcctggccaagatgttcgtcgagttc
gaggctggcatggtggagggcggcttctccaaggagagcgtcaagaccctgtgggacgtc
gtggtccccttcgccaagtacgcgttcaacaaggcgcactcggcggcctacggggtcgtg
tcctactggaccgcctacctcaagacccactacccgaccgagtacatggcggcgctgctg
acctcccagaaggacaacaaggacaagctggccgtctacctgggggagtgccgccacatg
ggcatcaccgtcctgccccccgacgtcaacgcctcgcgcgcccagttctccgccgacggc
gagagcatccgcttcggcctggcggccgtgcgcaacgtgggcctcaacgtcgtcgacgcg
atcgtggcggcgcgcgaggacaagggcgagttcaccagcttcgaggacttcctcgacaag
gtcccggcggtggtgtgcaacaagcgcaccatcgactccctgatcaaggccggcgccttc
gacaccctgggcaggacccggcgcgccctgcaggcctgccacgaggacttcgtcgacgag
atcatcggcgtcaagcgcaacgaggccgccggccagttcgacctgttcgcctccctcatg
ggcggcgacgccatggagggggccggaggcgcgccgtcgcccttcggctcgggccccgtc
ttctcctccgaggtgcccgacctgcccgagtgggacaagaaggacaagctcgcctacgag
cgcgacatgctcggcctctacgtctccgaccacccgctgctgggcctggagggcgtgctg
ggcaagctcgccgacaccgagatcgccgacctggtcgaggacgaggagcgccccgacggc
gccatggtgacgatcgccgggctcatcacgggcctgacccgcaagaccaccaagcagggc
aacctgtgggccatcgcccagatcgaggacctgggcggcagcatcgaggcgctgttcttc
cccagcacctaccagaccgtctccaccatgctggccccggacacggtggtcaccgtgcgc
gggcgcctcaaccggcgcgacgggcaggtggccctgtacgcccaggagatgaccctcccg
gacgtctccagcgccgcccacgaggcggtcaccatcaccctgccgaccaaccggtgcacc
gccccgctggtggagaggttcaaggcggtcctcgagaaccacccgggcatgtccacggtg
cggctcaacctcaccagccccggccgggaggtgcgcacccagctggactcctcgctgcgg
gtcgaggccagcgccgccttctactccgacatcaaggcgctgctcgggccgggctgcctg
aggcgctga
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integrated database retrieval system
