Actinomyces israelii: AIF0345_3087
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Entry
AIF0345_3087 CDS
T06659
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
air
Actinomyces israelii
Brite
KEGG Orthology (KO) [BR:
air00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
air03019
]
AIF0345_3087
Enzymes [BR:
air01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AIF0345_3087
Messenger RNA biogenesis [BR:
air03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AIF0345_3087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_16
AAA_19
AAA_25
AAA_30
CON_HrpB
AAA_11
ABC_ATPase
ResIII
Helicase_RecD
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WKR23116
LinkDB
All DBs
Position
3690754..3693531
Genome browser
AA seq
925 aa
AA seq
DB search
MSAWIRPRPTLSPGCSPPPPPLPAREALPRLRRLLADEPGRGVVVTAPPGTGKTTLVPPL
VARVLTAPDDGRRVVVTQPRRVAARAAARRLADLLGEPLGRTVGYAVRGERRAGPRTRIE
VVTAGLLLRRLQADPDLPGVAAVVLDEVHERSLESDLLLALLLDARALREDLVILAMSAT
VDLDRLPAMLAAGGPAGAAPVVSVAGALHPVEEVWAPPPPRAPRLGPRGVPREFLAHVAA
TVRRALAERTGDVLAFLPGAREVDDVVSRLRASLPPGTDVLPLHGRLSASAQDAALAPSP
PGGRRVVVATNVAESSLTVPGVRVVVDAALARRPRLDVARGMSGLVTVGASRSAGVQRAG
RAGREGPGAVYRCCSPVDWARAPQAPTPEILSADLSRAALELAVWGAPGGAGLAWIDPPP
APAMEAAHRTLTRLGLLEGGAAAGGAGSSAGGAGTDDGGAGGPAGPGKTGGPEGPGGPGG
AAPAPLSATALGRAVARIPADVRHARALLTAGGIVGARRAAEATALLSADLRAPGGDLTA
LARDVHDDGSPTSAWRAETRRLERAAAGVNRAVAGAPTEAAAPAASAATLAEAVALVAAL
ARPEWIARRRGPAPAAGADASYASVGGTGLRIPRRSPLGSSPWLAVADVDAVPGRGDATV
RSAAPIDEELALSVGAPWLVEEERVVWARGRLRTERLRRLGAITLTTTPGGSPPPGAAAD
AVVAACRAEGLGVLPWGGASELRARLALLHRELGEPWPAMDDDALLERAGLWLAPAVEAL
AARARQLDLDRLDVGAALRALLPWPEAAGLDELAPERIEVPSGSRVRVSYVGERGEALER
PVLAVRVQECFGWADTPRVAGGRVPVLIHLLSPARRPVAVTDDLRSFWAGPYRQVRAELR
GRYPRHAWPEDPWTTTATRGTRRRR
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtggatccgaccgcgcccgaccctctcgcccggctgctcgccgccccccccg
ccactgcccgcacgcgaggccctcccccggctgcgcaggctgctggcggacgagccgggg
cgcggcgtcgtcgtgaccgccccgcccggcaccggcaagaccaccctcgtcccgcccctg
gtcgcccgggtcctcaccgcccccgacgacggtcggcgcgtcgtcgtcacccagccccgg
cgcgtcgccgcccgcgccgccgcccggcgcctggcggacctgctcggcgagccgttgggc
cgaaccgtcggctacgcggtgcgcggggagcggcgggccggcccgcgcacgcgcatcgag
gtggtcaccgccggtctgctgctgcgccgcctgcaggcggaccccgacctgcccggggtt
gccgccgtcgttctggacgaggtgcacgagcgctccctggagtccgacctgctcctggcg
ctcctcctggacgcccgggcgctgcgcgaggacctcgtgatcctggccatgtccgccacc
gtcgacctcgaccgcctgcccgccatgctcgccgccggcggcccggcaggcgccgccccc
gtcgtctcggtcgccggcgcgctccacccggtcgaggaggtgtgggcgcccccgccaccg
cgcgcgccccgcctgggcccgcgcggcgtgccccgggagttcctggcgcacgtcgccgcc
accgtgcggcgggccctggccgagcgcaccggcgacgtgctcgccttcctgcccggcgcc
agggaggtcgatgacgtcgtgagccgcctgcgcgcctcgctgccgccgggcaccgacgtc
ctgcccctgcacgggcggctgagcgcgagcgcgcaggacgccgccctggcgccgtcgccg
ccgggagggcggcgcgtggtggtggccacgaacgtcgccgagtcctcgttgaccgtgccg
ggggtgcgcgtcgtcgtcgatgccgcgctggcccgccggccgcgcctcgacgtcgcccgc
ggcatgtcggggctggtgacggtcggcgcctcccgctcggcgggcgtccagcgcgccggc
cgcgcggggcgcgagggccccggcgccgtctaccgctgctgctcgccggtggactgggcg
cgcgcgccgcaggcgcccacgccggagatcctgtccgccgacctgtcccgcgccgccctc
gagctcgcggtgtggggcgcaccgggcggggccggcctggcctggatcgacccgccgccc
gccccggccatggaggccgcccaccgcacgctcacgcgcctggggctgctggagggcggc
gcggcggcaggcggcgccggcagcagcgctggcggcgctggcacagacgacggcggagcg
ggcggacccgccgggccgggcaagacgggcgggccagagggacctggcgggcctggcggc
gcggccccggcgccgctgtcggcgaccgcgctcgggcgcgccgtggcccgcatcccggcc
gacgtccgccacgcgcgcgccctgctgaccgccggcgggatcgtgggcgccaggcgggcc
gccgaggcgaccgcgctgctcagcgccgacctgcgagcccccggaggcgacctgaccgcg
ctggcgcgcgacgtgcacgacgacggctctccgacgagcgcctggagggcggagacccgc
cgcctggagcgggcggccgccggggtgaacagggcggtcgccggagccccgaccgaggcg
gccgcccccgcggccagcgccgccaccctggccgaggcggtcgccctggtggcggcgctc
gcccgccccgagtggatcgcgcgccgccgcggcccggcgcccgccgccggggccgacgcc
tcctacgccagcgtcggcggcacgggcctgcgcatcccgcgccgctcccccctgggctcg
tcgccgtggctggcggtggccgacgttgacgccgtccccggccgcggcgacgcgacggtg
cgctccgcggcgcccatcgacgaggagctcgccctgagcgtcggcgcgccgtggctcgtc
gaggaggagcgggtcgtgtgggcccgggggcggctgcgcacggagcggctgcggcgcctg
ggcgcgatcaccctgacgacgacgccgggcgggtcgcctccgccgggcgccgccgccgac
gccgtcgtggcggcgtgccgggccgaggggctcggcgtgctgccgtggggcggggcgagc
gagctgcgggcgcgcctggccctgctccaccgcgagctgggtgagccgtggcccgccatg
gacgacgacgcgctgctggagcgggccgggctgtggctggcgccggccgtcgaggcgctc
gcggcccgcgccaggcagctcgacctggacaggctcgacgtcggcgcggcgctgcgggcg
ctgctgccgtggccggaggcggccgggctcgacgagctcgcgccggagcggatcgaggtg
ccgtcgggctcgcgggtgcgggtgtcctacgtcggcgagcggggcgaggcgctcgagcgg
ccggtgctggcggtacgcgtgcaggagtgcttcggctgggcggacacgccccgggtggcg
ggcggccgggtaccggttctgattcatctgctgtcaccggcccggcggccggtcgcggtg
accgacgacctgcgctcgttctgggccgggccctaccggcaggtgcgcgccgagctgcgg
ggcaggtacccccggcacgcctggcccgaggacccgtggacgacgacggcgacccgcggg
acgaggcggcgccgctga
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