Argopecten irradians (bay scallop): 138304625
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Entry
138304625 CDS
T10542
Name
(RefSeq) DNA repair protein complementing XP-C cells-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138304625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
airr03400
]
138304625
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
138304625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
138304625
NCBI-ProteinID:
XP_069100895
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All DBs
Position
12:32513453..32534290
Genome browser
AA seq
1043 aa
AA seq
DB search
MKCEIKDEQDEICNDSEPGKTVSQCEDNISVLAYSNPLGRVQSENNNIQNMSGFDIDYMS
SCSSDESELEEESKKLSSCSIVCNANLTNGSINVDKTSGESKSIKTEKDTLSTPKALLVQ
ESTVLSSDEDFEASNATNKSRSSRKRKGDSKKNVKVEPNEKKSKATTTTRGKPRKSVKSG
KNKKTIPDQEKNEDVTERQQKDTDKVKMEVRKNPFKHLDESDVASVLMLMEGVKKGENSE
VGPSGSVDMSDQESLMESSEDEGWEDVKDHQSPKKNRLPEEGVEITIDAPELFKKRKKKQ
FDWKQYVQRQINRFQKGVREDIHKVHLLCLLVRGMYLNNLCNCPQLTAQAISIAPKEFSS
RCPENITMATLSRMVQWFKSLISITDGQSETEQMECALQNDFEEKKANNMLEFVLLFVIL
LRSLGLDIRLVMSLQPVSAKPVKDDAKTKKSPKGKLPNSTTKSSKSKQTQIDKDSSSQTT
KVPQKKDAKSAKSKTSKYFKNSDSKTKAVKLTGKNKAKKEDEDQKCDSEGGLEKYKVKNR
RLRTRGSKVKPSSYNQGSGDESEEESDDSFIPVSDNEDCKSKKQGEKRKSTQSQKSRKSK
HSQKVKVEDTESQSSENESDFEPSLTQFRSPLKTKKPLKNNRKVLSSDSDTSSNGTSRVG
CDQWAEVYLETEHKWICVNFVKGELNAPYAIESHATQPVHYVVGYNNKGYVKDVTARYAA
NWLTETRKLRVDPDWIEETYAPYLDPDTEAMEQEDTHIKDNLIRRPMPTSVGAFKGHPLY
ALKRHLLKFEAIYPNSAVPLGFIRGEPVYARDCVHVLHSRENWLKEGRAVRLGEESYKMV
KSRPKWNKPKENPDALDLELFGEWQTEVYIPPPAVDGKVPRNEYGNVELFKPSMLPAGTV
HLKVPGLNKVAKKMGLDCVPAMMGWDTHCGYSHPILEGFVVCEEHKDILLTAWDEDQEIQ
RQKEAEKKEKRVIANWKLLTKGLLIKDKLKSRFDLQTETSSQSHLEKCEDPEAIKAEDFE
KSWPRNREPKKKKKKKYDETEVI
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgaaataaaagatgaacaggatgagatatgtaatgattcagagcctggaaag
acagtgagtcaatgtgaagataacatttcggtgctagcatattcaaatcctttagggcgt
gttcaaagtgaaaacaataacatacagaatatgtcgggctttgatattgactatatgagt
tcttgtagtagtgatgaaagtgagttggaagaggagagtaaaaagttgtcatcctgctca
atagtgtgtaatgctaatttgacaaatggtagcatcaatgtggacaaaacctcaggagaa
tcaaaatccattaagactgaaaaagatactttaagcacaccaaaggctttgctagtacaa
gaaagcacagtgttgtcatcagatgaggattttgaggcatcaaatgctacaaataaatca
agatctagtagaaaaagaaagggtgattcaaagaagaatgttaaagttgaaccaaatgaa
aagaaaagtaaagctacaacaacaaccagaggaaagccaaggaaatcagtaaagagtggc
aaaaacaagaaaacaattcccgatcaggaaaagaatgaagatgttacagaaagacaacag
aaggacacagacaaagtcaaaatggaagttagaaaaaatcccttcaaacatttggatgaa
tctgatgtggcctcggttttgatgttgatggagggagtgaaaaagggagaaaactctgaa
gttgggccatccgggtcggtggacatgtcagaccaagaaagtttgatggagagcagtgag
gatgaaggatgggaggatgtcaaagatcatcagtctccaaagaagaaccgtctaccagaa
gaaggtgtagaaatcacaatagacgcccctgaactgttcaaaaagaggaaaaagaaacag
tttgactggaaacaatatgtacagcgtcaaattaacagatttcaaaagggtgtgagggag
gatatacataaggttcatctgctgtgtctgctggtcagaggtatgtacctgaacaatctg
tgtaactgtcctcagttgacagcccaggccatctccatcgccccgaaagagttcagcagc
cgttgccccgaaaacataaccatggcaacactctctagaatggtccagtggttcaagtct
ttgatctcaatcactgatggccagtcggagacagaacaaatggaatgtgcattacaaaat
gactttgaagagaaaaaagcaaacaacatgctagaatttgtactgttgtttgtcattcta
ctgagaagtttgggcctagacatacgacttgtaatgtctctccagccagtgtctgccaaa
ccagtcaaggatgacgcaaagacaaaaaagtctcccaaagggaaattacctaacagtaca
acaaaatcttcaaagtcgaaacaaactcagattgataaagacagcagttcacaaaccaca
aaggtaccacagaaaaaagatgcaaagtcagcaaaaagcaaaacctcaaaatatttcaaa
aactctgattccaaaacaaaagctgtgaaattgacaggtaaaaacaaagctaagaaagag
gatgaagatcagaaatgtgattcagaagggggattagaaaagtataaggttaaaaataga
cgtttgcgaacccggggttccaaggtcaaaccatcaagttacaatcagggaagtggcgat
gaaagtgaggaggaatctgatgacagttttatacccgtgagtgacaatgaggattgtaaa
tcaaagaaacaaggggaaaaaaggaaatccacacaaagtcagaaaagtagaaaaagtaaa
cattcacagaaagtaaaggttgaagatacagagtcccagagcagtgaaaatgaaagtgac
tttgagcctagtctgacacagttcagaagtcccctgaaaacaaagaaacctttgaaaaac
aacaggaaagttctgtcctctgattctgacacttccagtaatggcacaagcagagtgggt
tgtgaccaatgggcagaggtttacctggagacggaacacaaatggatatgtgtgaacttt
gttaaaggagaactgaatgcaccgtatgctatagaaagccatgccacacaacctgtgcac
tatgtcgttggctataacaataagggctatgtaaaggatgtgacagcccggtatgcagca
aactggttaacagagactcgtaaactgagagtggatcctgattggatagaggagacatac
gccccatacctagaccctgatacagaggctatggagcaagaggatacacacattaaagat
aacttgatcagacgtccaatgccaacgagtgtcggagcatttaaaggacatccgttatat
gcattaaagcgtcacctgctcaagtttgaggctatctaccctaactctgctgtaccactg
ggctttattaggggcgagccagtgtatgcccgagactgtgttcatgtgttacattccaga
gaaaactggctaaaggaagggagagctgttcgtcttggcgaggaatcctacaaaatggtg
aaatccagacctaagtggaataaaccaaaggagaatccagatgcccttgaccttgaacta
tttggagagtggcagacggaggtttacatcccaccaccagctgttgatggaaaggttcca
aggaacgagtatgggaatgttgaactcttcaagccgtcaatgttacctgctggtacagta
catctaaaagttcctggattaaacaaagttgcaaagaaaatgggtttagactgtgtccct
gctatgatgggatgggatacacattgtggttactctcaccccatactggaaggattcgtt
gtttgcgaggaacacaaagacattctattgactgcctgggatgaagatcaagagatacag
cgtcagaaagaggcagagaaaaaggaaaaacgggtgatagctaactggaaactgcttaca
aagggtcttctgatcaaggacaaactgaaatcaaggttcgaccttcagacagagacaagc
tcacagagccatttagagaaatgcgaggatccagaagctatcaaagctgaagactttgag
aaatcatggccacgaaacagagagcccaagaaaaagaaaaagaagaaatatgatgaaacg
gaagtgatctga
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