KEGG   Argopecten irradians (bay scallop): 138305957
Entry
138305957         CDS       T10542                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
airr  Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:airr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:airr03041]
    138305957
Spliceosome [BR:airr03041]
 Complex B
  Other components
   Complex B specific factors
    138305957
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_ACSF4 LisH_TPL Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_Vps41 Ge1_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 CFAP251_N Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF4 DSE1_N Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_RFWD3 TRM82_WD ASA1 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_DCAF12 PAC11 LisH_WDR26 Beta-prop_IP5PC_F LisH_UCP007778 SHKBP1_KCTD3_C LisH_2 Beta-prop_WDR11_2nd DUF7899 DUF7165 zf_topless LisH_PAC1 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 138305957
NCBI-ProteinID: XP_069102364
LinkDB
Position
13:complement(16178878..16193502)
AA seq 512 aa
MAVEIESADVVRLIEQYLKENNLLRTLSVLQEESGISLNTVDSVDGFVSDINSGHWDTVL
QAIQTLKLPDQKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMMKQNQPDRYIHLENM
LARSYFDPREAYQEGQTKERRRNAIATALAGEVNVVPPSRLLALLGQSLKWQQHQGLLPP
GTTIDVFRGKAAVKEQEEEKFPTQLSKTIKFGQKAHIECARFSPDGQYLVTGSVDGFVEV
WNFTTGKIRKDLRYQAQDNFMMMDDAVLCMTFSRDSEMMATGAQDGKIKVWKIMTGQCLR
RFERAHSKGITCVSFSKDNSQLLSASFDQTIRINGLKSGKTLKEFRGHTSFVNDAVFTTD
GHHIISASSDGTVKVWNVKTTECQNTFKPLGGSGTDITVHSIHLLPRMAEQFVVCNRSNT
VVIMNMQGQIVRSFSSGKRDGGDFVCATVSPRGEWIYCTGEDMVLYCFSVTTGKLERTLT
VHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcggtcgaaatagagtcagctgatgttgtgcgcctgattgagcagtacctgaaggag
aacaacttactgaggacattatcagtactccaggaggagagcggaatctccctgaacaca
gtcgactctgtagatggctttgtatctgacattaacagtggacactgggacacggtcctt
caggccatccagacacttaaactgccagaccaaaaacttatcgacctttacgaacagatt
gtgttggaactgatagagctgagagaattaggagcagcaaggtcgttactaagacagacc
gatcccatgataatgatgaaacagaaccaaccggaccggtatatacatctggaaaacatg
ttggccaggtcttactttgatcccagagaggcataccaagagggccagacaaaggaaagg
agaaggaacgccatagcaacagccttagctggtgaggtgaatgtcgtccctccctcccgt
ctactagccttgttaggacaatctctaaagtggcagcagcatcagggacttcttcctcca
ggaacaacgattgatgtgttccgaggaaaggctgccgtaaaggaacaggaagaagagaaa
ttccctacacagctcagcaagacaatcaagtttggacagaaggcacatatagagtgtgcc
cggttctcccctgatggtcagtacctggtcactggctctgttgacggctttgtagaggtg
tggaatttcactactggtaaaatcaggaaagatctgcgatatcaagcccaggataatttt
atgatgatggacgacgctgtgttatgtatgacattcagtcgagactcagaaatgatggca
actggagcacaggatggcaaaatcaaggtatggaagattatgacaggacagtgtttgcgg
agatttgagcgtgcccacagtaaagggatcacttgtgttagcttctccaaagataacagt
cagctactcagtgcttcctttgatcaaaccatcagaatcaatggtttgaagtcagggaaa
acactgaaggaattcagagggcacacatcctttgtcaatgatgctgtatttacaactgat
ggacatcatattatcagtgcaagttctgacggtactgttaaggtatggaacgtgaagacg
accgagtgtcagaatacatttaaacccctcggtggttctggtacagatatcactgtacac
agtatacatctactacccaggatggcagaacagttcgtcgtgtgtaatcggtctaatact
gtcgtcatcatgaacatgcaaggacagattgttaggagtttctccagtggtaagagagat
ggaggagactttgtgtgtgccacggtctcgccccgcggggaatggatctactgtacaggg
gaggacatggtcttatactgcttcagtgttaccacaggcaaactggagaggacacttacg
gtacatgaaaaagacgtcataggtatagctcatcatcctcaccagaacttaataggaacc
tactcagaggatggacttcttaaactgtggaaaccttga

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