Argopecten irradians (bay scallop): 138306007
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Entry
138306007 CDS
T10542
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138306007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138306007
Cell adhesion molecules [BR:
airr04515
]
Immunoglobulin superfamily
DCC/UNC5 family
138306007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Neogenin_C
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
ig
Fn3_VIN3
V-set
Interfer-bind
Ig_RIMBP2
C2-set_2
Ig_Rha78A_N
NDNF
C2-set
Fn3_Dep-1_3rd
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
138306007
NCBI-ProteinID:
XP_069102423
LinkDB
All DBs
Position
13:complement(8583916..8749673)
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AA seq
1548 aa
AA seq
DB search
MAPWSRECRPELIRWSASLVCLLVATSVKGDLSIFSDVRFTTEPSDIIVNRGEPAMFNCG
VQCSTTTPAVRWLKNGEPISLDSGRYSIMANGSLLIASVQHSRTAPRLSDKAVYQCVASV
ENVGQIISRKANLDIAHLSKTFDIQPHDMTLYLRDVAMFRCEIDGAPPPNITWYKDGNPL
QDRNNIRIFTDGVLEINPVEFRDFGSYHCVAESLDKVKSRSSRTARLRQNADIDEILQGI
QPSFVMRPKNTWAEVGTTVILFCGANGQAKEGRQPTISWLKNGITIDFTQTQGRLTVVGA
GSLQIYQVREEDSGTFTCRAENPIDSEDADATLTVQVPPMFRDQPVNHIAQVNSDALFLC
DIYGVPMPETRWFKNGQLVKELNESDYFQIVDNKHLRILGLLKKDEGIYQCFGENSLGSI
QRSAQLIVVDQMVSPPTPSSFTRPIHHLGGIYGDQTRLPSKPREMRAAIVSRRFVTLSWS
RPQSTGEGEATQLIYSVYWKELGSERERVLNTTQLGANIQHLKPNTAYEFRLRAYNQYGP
SPTFARISINTEKDVDVPSPPTNVQVTAVSSMAIQVEWEPPVHAKGTITKYVVISYEVGE
DSGENRVEVLDTSYLLENLKSFREYSFRVFASNEIGDGTSSKEYTCRTFSAKPSDTPTNV
SVETSSSESIIVRWEPPPADSQNGVITGYKIKYKKRGDNRAAKTVTTDGNRRLYALTDLM
KDTEYQVRIAALTVNGSGPYVRWHRATTYRDDLDETRVPPPPRLIRVVPYDTSIRVSWSA
PDPESKILVRGYILGYGKGVPDSYRLTLDADSHVYTIENLQPASQYVITVLAFNNIGDGE
PKYQTAVTSEETVTEQVTPMMPPVGLKTIVLSSSTVVLTWADTSLGKSQTVTDSRYYTVR
YTSLPNNNKRYKTINSTDLNAHIDNLKPNTRYEFSVKVIKGRRQSTWSMSEINVTQESAP
STVPRDLTPVPKEDNPTAVTMNWQPPQKPNGQITGYLLFYTTDQSQNDIEWVVEGVLGEK
LSTTVKGLTPDTTYYFKIQARNSKGYGPMSDTIIYKTPAKDGTGGGKISPKFIAPEINYN
PNVKDIDEQPQEDDDKQNDAGGLSTNVVIIIVTCVVGASFCIVIIVVAIVLCQKRDNGER
NKRPQAAQQQSPSKGKITQRDLKKPDLWIDHQQQFELKNVDKPERSESMLTMSTLRRNSV
DGNKSIDELPPYHPDIDKEYPEITYHPHGTHEDRYTPMRQQPIQHPPSGLIRPKATKPPM
MIGVDTQPSHREPIAMVTALQSSQMGQMDSSHGMMSHSRPGFPRTQYNMPYTTSPRVNQD
HGHNMHGMGMDHNYHVSALDDDESSVNEPLLDEHYNARVGYGLKSPDICPKQSHSLPHLA
GHGITPSGGSGSHPHPQGVLSPTPHKGQPTAIISPDQQQPGECEEHKSLPRSLHRHPLRS
FSVPSPPPPGGNPLSSVALTPKHQIVKPQQTSSPYKKPTPPISSVPIKPRTTMPIISTPK
APDVVLKGSQEDPDLQKSVSTEELTAEMANLDCLMKDLNAITQQDFEC
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggccccctggtcgagggaatgccggccggagctgatacgttggtccgcgagtctcgtc
tgtttactcgtagcgacatcagtgaaaggtgacttgtccatattcagcgatgtccgtttc
acaacggagccgagtgacatcatcgtcaacagaggggagccggccatgtttaactgtggg
gttcagtgcagcaccacgacgccggccgtccggtggttgaaaaacggagaaccaatcagc
ctggacagcggcaggtattccattatggccaatgggtcactattaatcgcgagtgtgcag
cattctcgtacagcgccacggctctctgataaggctgtataccaatgtgttgcatctgtg
gagaacgttggtcaaatcattagtcgcaaagcaaacttagatatcgcacatttatcaaaa
acatttgacatccaacctcatgatatgacattatatttacgggatgtggctatgttccgg
tgtgaaatagacggggcgccgccccctaatattacgtggtataaagacggaaacccgcta
caagatagaaataatataagaatatttacggatggtgttttagaaataaatccggttgaa
tttcgagactttggatcgtatcattgtgtcgcagaaagtttagataaagttaaatcaaga
tcaagtcggacagcaagattacgacagaacgctgatatagatgaaatactacaggggata
cagccatcatttgttatgcgaccaaagaatacgtgggctgaggtcggcacaacagtaatc
ctcttttgtggggctaacggacaggcaaaagagggcagacaacccacaatttcatggctg
aagaatggcatcaccattgattttacgcagacccagggtagactaacagtcgtgggcgcc
gggagtttacagatctatcaggtccgggaggaagactccggtacatttacatgtcgagca
gagaatcctatcgactctgaggacgccgatgcaactcttactgtacaagttccaccaatg
ttccgagaccagccggtgaaccacatcgctcaggtcaactccgacgctctctttctctgt
gatatatatggagtaccaatgccagaaacacggtggtttaaaaacggacaattagtcaag
gaactcaacgaatcagactatttccaaatcgtagataacaaacatctgaggattctggga
ttgctgaagaaagatgaaggaatctaccaatgtttcggagaaaactcactgggcagtatc
cagcgcagtgcacagttaatagtagttgatcagatggtctcccctcccaccccttcttcc
ttcacacggcctatacatcatttaggcggaatctacggtgaccagacgcgccttccatcg
aagccacgagagatgcgagcggccattgtttccaggaggtttgtcacactgtcctggagc
agaccacaatccacaggagaaggggaggcaactcagttaatctactctgtatactggaaa
gagctaggatcagaaagagagagggtattgaacaccacacaattaggggccaacatacaa
caccttaaacccaatacagcatacgagttccgacttcgggcctacaaccagtacggaccg
tctccgaccttcgcacggatatctatcaacacagaaaaagatgttgatgttcccagcccc
cctacaaacgtccaggtgactgcagtatcttccatggcaatccaggttgagtgggaacct
cctgtccatgcaaagggtaccattaccaaatatgtggtaatctcatacgaagttggtgaa
gacagtggtgaaaatcgggttgaggtccttgatacctcatacttgctagaaaacctaaaa
agttttcgagagtacagtttccgtgtttttgccagtaatgaaattggggatggaacaagt
tctaaagagtacacttgtcgaacattttcagccaaacctagtgacacgccaacaaatgtg
tcagtggagacttcaagttctgagagtattattgtgagatgggaaccccctccagctgat
tcacaaaacggtgtcatcactggatacaaaataaagtacaagaaacgcggtgacaatcgt
gcagctaagactgtgactacagatggaaacagacgtctgtatgccctcacagacctcatg
aaggacacagagtaccaggtgaggattgcagccctgacagtcaatgggagtggaccctac
gttcgctggcaccgagccaccacgtatcgcgacgacctggatgagacgcgagtacctcca
cctccacggctgatacgagtggtgccatacgacacttccattagagtgtcgtggtctgcc
ccggatccggagtccaagattttagttcgtggttacatactggggtatggtaagggtgta
ccagactcctaccgactgacattggatgcggacagtcatgtatacactatagaaaaccta
cagccagcctcgcagtatgtcatcacagtgttagccttcaataacataggtgacggagaa
cccaagtaccaaacggctgttactagtgaggaaacagtgacagaacaagtgactcccatg
atgcctcctgttgggttgaaaacgattgtgttatcatcgtcaacagtggtactgacctgg
gcggacacatcattagggaagtcccagacggtcactgacagtcggtactacactgtccgt
tacacctctctaccaaataacaacaaacgatacaagactatcaactccactgaccttaac
gctcatatcgacaaccttaaacccaacacgcggtatgagttttctgtcaaggtcattaaa
ggtcgtcgccagagcacttggagtatgagtgaaatcaatgtcacacaggaatcagcgccc
tctactgtaccaagagatctgacccctgttccaaaagaggacaatcccacagcggttaca
atgaactggcagcctccacagaaacccaatgggcagatcacaggttatctgctgttctat
acaactgaccagagccagaatgatatagagtgggttgttgagggagtactgggagagaaa
ctgtccaccacagtcaaaggtctcacgccggacaccacctactacttcaagatacaggcc
aggaacagcaagggctacggacccatgtctgacacaatcatctacaaaactcctgctaaa
gatggtacaggtggaggaaagatcagcccaaaatttatagctccagagattaattacaac
ccaaacgtcaaagatatagatgaacagccacaagaagacgacgacaaacagaatgatgcg
ggtgggctctccaccaacgtcgtcattatcattgtgacatgtgtcgtgggggcttccttc
tgtattgtcatcattgtagtcgccattgtgttgtgtcagaagagagacaacggagaacgc
aacaaacggcctcaagcggctcagcaacagtcgcccagtaaagggaagataacccagcgt
gacttaaagaagcccgacctgtggatagatcatcagcaacagtttgaactcaaaaacgtc
gacaaaccggagagaagtgaatcaatgctgaccatgagtacattacgacgtaattcagtc
gatggaaataaatccatagatgagttacccccatatcatcccgacattgacaaagagtac
cctgaaataacctaccacccccatggtacccatgaagatcgttacactcccatgagacaa
cagccaatacaacacccaccatcaggtctgattcgccctaaagctacgaaacctccgatg
atgatcggagtagacacgcaaccttcacatcgagaacccattgccatggtaacagcgtta
cagagcagtcagatgggacagatggactcgtcacacggaatgatgtcccactcgcggccg
ggcttccccagaacccagtacaacatgccatatacaacatcgccacgcgtaaatcaagac
cacggccataatatgcacgggatggggatggaccataactatcatgtgtcagccctggat
gatgatgaatcgagcgtcaatgaaccgctgttagatgaacattacaacgcacgagttggc
tatggccttaaatcacccgatatctgccccaagcagagccatagcctaccccacctggct
gggcacgggatcacccccagtggagggtcagggtcacatcctcacccccagggggtgttg
tcccctaccccccacaagggtcagccgactgccattatctcgcccgaccaacagcaacct
ggcgagtgcgaagaacataaaagtttaccccgatccctccaccggcatccgctgcggagc
ttttccgtgcccagtcccccgcccccgggcggtaatcccctgtccagtgtcgccctcacc
ccaaaacaccaaatagtaaagccacaacagacgtctagtccatacaagaagcctacacca
cctatatccagcgtgcccattaaaccacgtacaacgatgcccatcatcagtacccctaag
gcccctgatgtggtgctgaagggcagtcaggaggatccagatctccagaagtcggttagt
acagaggaactgacagcagagatggccaatcttgattgtctgatgaaagacttaaacgca
atcacacaacaagacttcgaatgctag
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integrated database retrieval system
