Argopecten irradians (bay scallop): 138306604
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Entry
138306604 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: intermembrane lipid transfer protein VPS13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
airr Argopecten irradians (bay scallop)
Brite
Membrane trafficking [BR:
airr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138306604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138306604
NCBI-ProteinID:
XP_069103143
LinkDB
All DBs
Position
13:complement(3662115..3862577)
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AA seq
3260 aa
AA seq
DB search
MVFESLVVDLINKYLGDYVENLDRSQLKLGIWGGDAVLQNLDLKESALDDLDLPVKIKAG
HIGKLTLKIPWKNLYTEPVIASIDGVYALAVPNIAIKYNAEKEEKAKQEAKQRRLQQIEE
AKQLEAEKTKPKDPKKDSFAEKMATQIIKNLQVHVKNIHVRYEDSYTNPKRPFSLGVTLQ
ELLFQTTDENWTPCILKEAVTQIYKLVRLDSLAVYWNSSSECLDGTDKAAILERLKTDIA
SKDKKTQSQYLIKPISLVSHLRLNTKPEQTKFTVPKIYLTLVFDDIAVMLSKMQYTDILE
MLEALERMTLRGVYRKYRPEVPVHKHSKQWWHFAMTSVLEESIRRRRRMWSWDHISTHRK
TMRAYREAYTKKLDSKKVPADVLKKIEECERVLDVFSLTLMRQQAEVEAAKLGAKREKEK
EEKGWFGGLFGGKKKKESQASKEGGDIQEKFQELYTPEEKAKLYSAIGYEENEADPTLPK
EFVAVKFVTKLTTLSFTLKDDSRRDPQLLRVQLKDVFSSFGQRPAASAIQLEAKIDRFTV
SGVQQNGQIPKMVLSQTEEADHVYSLLDVQVETNPLDGACDTRVRVNARPLQIVYDAVTV
NQLAEFFKPPEEIRLQQLSQVAVAKFEDFKEQSATGLQHAIDLRKYTDIRIDVKSSYVII
PEGGFYKKNCKQLILDLGNLKVNSEKNQSSSAVKGQHESKFKVAALKAAQPTRRLMDSVE
EIIKRAYDKFNIEIDRTQLLFVSPGVDWQAVRNLPVSPLHVLEPISLSVCLQKCMFDKDS
RMAKMKVSGELKLVSLTISDARLQEIIQLVDSIPLPESAPPPEEEDLFMSATDIPPVTDL
NANQLSLVNVAVVAVGDQQGQKKETDRSTSQDLTNYTDLELKFEVKKVCVNLMQHTNVED
ILVLKLVVESIGTQLAVRTHDMSAEAYIGGIYLQYLKEKASEILVQKLEAAKDNDTLSVT
SGGPLINLINTPSVDDHTYRLLTVHYIKANPSGPDFATTHQKTEQTVTVTFTALEVMLHQ
EALLSLIVFAEGLQPPTRPQVEAKTSTTSERKEEVTEKKDRPRSGLKKKGKEKDPDQIDI
RVNAHLDQIGVTVCTKQNLITDLRVKGIDAKVTIQEEKTVVSAMLKAITIFDPDPDTLYQ
KIMEIQGEAVLALDVTIYNHATEGAKYADMSCMDTNVNITLGCIRLVFVNKFVNDLLMFV
NNFQAAKDQAVFQVARERMVQAGQSVAEFSKDAVSKLQETAPRVGLKINMDAPLIVIPTS
SKSREVLLADFGELSIQNSFHLSGQTSSSGVPAVLDRMIIQLKQLKLTSPDATMSQGDFK
MAMSLLDENLNEGQTKKETAGQGQIEQPTESSVTVSQESPSGSSSAGQVTPKASGSTEVK
VNYTKVKFNFQMKSLEAALYTGESNLDSGTSTRDPSKCLGKVALKVIAVDGXGAIVTKVI
LKDTVVDDARPEKQNGVTRMIERNYDSTEKTVGTGGGQGANMIDVSFTQDSNQDKDIVVK
VSSLYICVCVDFLMALATFFQMPESKSKPAVTAKEDKPKATPSKQAQEAPFAEMRISVTM
EKPEIILIEDQSKPSSTALKMDTHLSFKMRMSAERQEMSATIRDLQIISCVFNQRQNVGS
QILNPCEISFYSQAPFGKGAHMDLSTTDLILNISPATIRTISAVVATLSAKSGEAEEDNA
YQVPSDLWEIKKLEGNNFWYLTTGEVVTPDRDLSSLEDEDIREEQGKAVTLSGYELIIKV
PTIVVKIEGGVGNRTVPLLILESSFQGEVKDWSGKLGVESTLKVEVAYYNEKLTVWEPLV
EPIMEDGKLRRWELGLEVTMNEDIPMITDDDVDGESENIVLPPPKMSVNIRSNDDLQLVM
TKTCLEVLNNLGKSFGEAYQLVEPTEKAGVVMSPYVIKNNTGIPMVMKLDNSFEMPEDAS
NMKVSLSPTRELHLFTRKKSVLSRKASVIKATQEGDEKKLIFQMEQYNATREVTIKRAEK
RLYQINNRTSANEVWAVVVCTDSHIGQRIVSLRSIVQVKNHLPQTVEVFYREGSKISSCG
LVLAEETMDVPLHTIYTETGEFFFKPVLETETTHVSYKMSKESVGWRSAANLGTKQLTCE
GRDGHSPFYMNVWAECEQIYYEEGESLTAKSYTLHLCPTVILHNLLPFPVKYMLEGTDGY
QTLDRGENMPLLNAGVGKSNLEIIIPNYMDKEWCGRNLLRVDIPDLSLWTFHSFVGSQKI
EMDLGFHCKKASGSMDLSLYSPYWMINKTGQRVLYKASDSEDIMEHHHDNQDAVLFSFKQ
KSFFAAKKKKNKHTVKSALAEPAFVVSTTLTPDELQDYRREMEWQEGKDHGKDKKVKEWR
LSGKACLKIGDTEWSDKFSLDVVGSSGTVQCKTKTRTFEVGVNIVLSQSGLTKICTFTPY
YMLLNTADHSLLVAEVASTETWYEVKSKECQPFWPQQTGKEMKMKAKVLGSDSATTEFLF
NKAHNTLARLNDKYGGIHVDCQVTEAAMVTTLSSYKDGMATVQLVNHTEAASVTFHQSGS
KNTQLLGPGHYMMYTWENTTDKREIVWTCGDKKDVKNTLVEDGYGWFALTSDTNVYWVSF
LDGMQRVLLFTEDLQLATLAQQAGELERIEQEITVCIQGLGLSLINDLSQTEVAFLGITS
SGIIWEEKKKRYKALSVKNGLVLEDAYQKYLMELDLGHNPPAHLNLENKMEVDFNEMKLI
RPNKRGIRRSFQEGIWLQYKTSPHQIQLHAKINRLQLDNQMSGAVFPTVLSPVPLPKSVA
ADSVPKPFTEVSIMLRKQEHDNMLQFKYFKVLIQEMQLKVDQGFLNNIIDLFSSSQDISR
QQETTEFIKDCDKVKVKLMDEVGLSLADEQKNFYDYLHFSPIKIHLSFSLQGGGDGKPTQ
IHANVINIFLQSVGVVLTDVQDVVFKLGFFQKEHCFYNQSQLVGQMSMHYAGQAIKQMYV
LVLGLDVLGNPFGLLRGMAEGIEDLFYEPYQGAIQGPEEFAEGLALGVRSLFGHAVGGAA
GAVSRITGTLGKGFAALTLDDDYQKKRREAMNKRPANVREGLARGGKGLVMGVFDGVTGI
VRKPIEGAKNEGVGGFFKGVGKGLVGVVTRPTSGVIDFASSSLEGIKRITDFSEEIHRIR
PPRRFHGDRVIRPYNKQEAEGYAILSETEKGKFATTDHYVAHLVLSRDSKHVLLVTDKRV
IFANRGELFGHWDADWTYTWVEMKEPPKRSQKGIEIYLKEKEKKKFLFSSSTAKKEVVIG
DQRLAEWIASKIKETMMRGK
NT seq
9783 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtcattagttgttgatctgatcaacaaatatcttggagattatgtggaa
aatctggatagatcccagctaaaactgggaatatggggaggtgatgctgttctccagaac
ttggacctaaaagagagtgctttggatgaccttgaccttccagtgaagatcaaagcaggc
catataggaaaactgacactgaagatcccctggaagaacctgtatactgaacctgtgata
gcctccatagatggcgtgtatgctctggccgtccctaatattgccattaagtacaatgcc
gagaaggaggagaaagccaagcaggaggcgaaacagagacgtctacaacagatcgaggag
gccaaacagttggaggccgagaaaaccaaacctaaggatccgaaaaaagactctttcgct
gagaaaatggctacacagatcataaagaacttacaagttcatgtgaaaaacatacatgtt
cgttatgaggactcgtacaccaatcccaaacgtccattttcgctcggggtcactcttcag
gaacttctcttccagacaactgatgagaactggactccatgtatcctaaaagaggctgtt
acacaaatttacaagctagtccgactcgactccctggctgtgtactggaacagtagctct
gagtgtctggatggaacagacaaggctgctatactggagagactgaagacagatattgct
agtaaagacaaaaagacacagagccagtatttgatcaagcccatctccctggtttcacac
cttcgtctgaacacgaagccagaacaaacaaagttcaccgtacctaagatctacctcaca
ctcgtgtttgatgatatcgcagtcatgctctccaaaatgcagtatacagatattctagag
atgttggaggccctggagagaatgacgctccgtggtgtctacaggaaataccggccggaa
gttccagtacataaacactctaaacagtggtggcattttgcaatgactagtgtccttgag
gagtctatccgccggcggcggcgcatgtggtcctgggaccacattagtactcatcgtaaa
actatgcgggcgtaccgcgaggcctacacaaagaagcttgacagtaaaaaagtccctgca
gatgtcctgaaaaagatagaggaatgtgaacgtgttttggatgtttttagtctgacgttg
atgagacaacaggcagaagttgaggctgctaaattgggtgcgaaaagagagaaagaaaag
gaggagaaaggctggtttggaggactgttcggaggaaagaagaaaaaagaaagtcaagca
agcaaggaaggtggagatattcaggagaagttccaggaactgtacacaccagaagaaaaa
gccaagctatacagcgccattgggtacgaggaaaacgaggccgacccaactctaccgaaa
gagtttgtagctgtgaagtttgtaaccaaactaacaacgctgtcctttacactgaaggat
gactctagaagggatcctcaactccttagagtgcagttgaaagatgtgttttcatcgttt
ggacaaaggccggcagcctcagctatacaactggaggccaaaattgaccggttcactgtc
agcggtgtccagcagaatggtcaaatacctaaaatggtgctatctcagaccgaggaggct
gaccatgtctactctctcctggacgtccaggtggaaactaacccactagacggagcctgt
gacacacgagtccgggtcaatgctcgacctctacaaattgtgtatgatgctgtcactgtg
aaccagttagcagaatttttcaaacccccggaggagattcgattacaacagctgtcacaa
gtagctgttgctaagtttgaagattttaaagagcagtcagctacgggactccaacacgcg
atagacttgaggaagtatactgacatcaggatagatgtcaagtcttcttacgtcatcata
ccagagggaggcttctacaaaaagaattgtaagcagttaatccttgaccttggtaatctg
aaggttaatagtgaaaagaaccaatcatcatctgctgtcaagggtcagcatgagtcaaag
ttcaaggtcgcggccttgaaagcagcacagcccacgaggagactgatggattctgttgag
gaaatcatcaaaagagcctatgacaaatttaacattgaaattgacaggacacagctccta
tttgttagtccaggagttgattggcaggcggtgcgtaacttacctgtgtccccgctacat
gtcctagagccaatatcactgtccgtttgcctacagaagtgtatgtttgacaaggactcg
cgcatggccaagatgaaggtatcaggagaattgaagttggtcagtctgaccatctcagat
gcacggcttcaggagattatacaactagtggacagcattccactcccagagtcggcccca
cccccagaggaggaggacttatttatgagtgccactgacattccaccagtgacagacctg
aatgctaaccagctcagtctggtcaatgtggcagtagtggctgtgggtgaccaacaggga
cagaaaaaagaaacggatcggtcgacctctcaggatctcactaactacaccgaccttgaa
ctcaagtttgaggtaaaaaaggtgtgtgtgaacctgatgcagcacacaaatgtggaggat
atattggtactgaaactcgtcgtcgagtcaataggaacacagctggctgtccgtacacac
gacatgagcgctgaggcatatataggaggcatctacctacagtatctcaaggaaaaagcc
tccgaaatattggttcaaaagttagaagcagctaaagataatgataccttatcagtgacc
agcggtggacctctgattaacctcatcaacaccccttcagttgatgaccacacttatcga
ctgctgaccgtccactacatcaaggctaatcccagtggacctgactttgctaccacacat
cagaaaaccgaacagacagtgaccgtgacctttaccgccctagaggtcatgctccaccag
gaggcgttgctgtctctcattgtgttcgctgaaggtttacagcctccaacgcgacctcaa
gtagaagccaagaccagtacaactagtgaaaggaaagaagaagtaacggagaaaaaagat
cgtccaagatctggattaaagaagaagggaaaggagaaagacccggatcagatagacatc
cgagtcaacgctcaccttgaccagattggagtgacagtctgtaccaaacaaaacctcatc
actgacctacgtgttaaaggtattgatgccaaggtcacaatacaggaggagaaaactgtg
gtgtcggccatgttgaaagctatcaccatcttcgacccagaccccgacacactgtatcag
aagattatggagatccagggtgaggctgtgttagctcttgatgttactatttataaccat
gcaacagagggcgctaaatatgcagacatgtcgtgcatggatacaaatgtcaacatcaca
cttggctgcattcgcctcgtatttgtcaacaaatttgtcaacgatttattgatgtttgtg
aacaacttccaagctgctaaagaccaagcagtattccaggtggcccgagagcgtatggtc
caggccggtcagtcagtggccgaattctcgaaggacgcggtcagcaaactccaggagaca
gctcctcgtgttggcctcaaaatcaatatggacgctcctctgatcgtgattccgacgagt
tccaagtcacgtgaggtgctgttggccgacttcggtgaactcagtatacagaatagtttc
catctgagtggtcagacgtccagtagtggtgtaccggcggtgctagatcggatgatcatc
cagctcaaacagttaaaactcaccagtcctgatgcaactatgagtcaaggagatttcaaa
atggccatgtcacttctggatgaaaatttaaacgaaggtcaaacaaaaaaggagaccgca
ggtcaaggccagattgaacagccaacagaaagttctgtaacagtttcacaggaatcacct
tctggatcatcatctgctggtcaggtgacgccaaaggccagtggctcaacagaggtcaag
gtcaattacaccaaggttaaatttaacttccaaatgaagagcttagaggctgccttgtat
acaggagaaagcaacttggattctggtaccagcacaagagacccatctaaatgtcttggc
aaggtcgcactcaaggtcatagctgtggatggcnatggagccatagttaccaaggtcatt
ctcaaggacacggtcgtagacgatgccagaccagaaaaacagaacggagtcacaaggatg
attgagagaaattatgattcgacggagaagactgtcggtacaggagggggccagggagcc
aacatgatagacgtcagttttacacaggacagtaaccaggacaaagatattgtggtgaag
gtcagcagcctatacatctgtgtatgtgtggacttcctcatggccctcgctacgttcttc
caaatgcccgagtccaaatccaaaccggcggtaacagccaaggaggataaaccaaaagcc
actccatctaaacaagcacaagaggcaccgttcgctgagatgagaatcagcgttaccatg
gagaagcctgagatcattctcatagaggaccaatcaaagcctagcagtacggccctcaaa
atggatacacatctgtcctttaagatgaggatgtcagcggagcgacaagaaatgtctgcc
actatccgagatcttcagattatctcttgtgtttttaaccagcgtcaaaatgttgggtca
cagatactcaacccttgtgagatctcattctatagccaggctccctttggtaaaggggcc
cacatggacctatctaccacagacctgatactgaacatctcgccagccaccataagaaca
atctcagctgtggtggcaacgctttccgcgaaatctggagaggcggaggaagacaatgcg
taccaggtgccgtcggacctgtgggagattaaaaaattggaaggcaacaacttttggtac
ctaacaacaggggaagtggtcacgcctgaccgagatcttagttcactggaggatgaagat
atcagagaagaacagggaaaagcagtcactctgtcaggatatgaactgattataaaagtt
ccgacaatcgtagtgaagattgaaggtggagtagggaacagaacagtgcccctcctcatc
ctagagtcttccttccagggggaggtaaaggattggagtggtaagcttggagttgaaagc
actttgaaggtcgaggtggcttactataatgagaagctgacggtgtgggagcccttggtg
gaacccatcatggaggacggtaaactacgcagatgggaactcggacttgaggtgacgatg
aatgaagatatacctatgattacggatgatgacgttgacggcgagtcagaaaatattgtc
ttacctccacctaagatgtctgttaacatcagatctaatgatgatctacagctagtcatg
actaaaacctgtctggaggtgttaaacaacttaggcaaatcgttcggtgaggcgtatcag
ctggtggagcctacagagaaggctggagttgttatgtcgccctacgtcataaaaaacaat
accggtatccccatggtgatgaaactcgacaactcatttgagatgccagaagatgcctcc
aacatgaaggttagcctgtcccccactcgtgagctccatttatttaccagaaagaagagt
gtgttgagtagaaaggcttcagtgatcaaagcaacacaggagggagacgagaaaaaactc
atcttccagatggagcagtataatgccacaagggaggtaactataaagcgagcagagaaa
cgactttaccagatcaacaacaggacgagcgccaacgaggtctgggcagttgttgtgtgt
accgactcccacattggacagaggattgtctcccttagatctattgtacaggtgaagaat
catttgcctcagactgtggaagtgttctaccgagaaggctccaagatttcctcctgtggc
ttggtactcgccgaggagacgatggatgtcccattacatacaatatacacagaaactgga
gagttctttttcaaacctgttttagaaacagaaaccactcatgtttcgtacaaaatgtcc
aaagagtctgtaggttggaggtctgcagctaatctgggcaccaaacaactgacatgcgag
ggacgagatggacacagtccattctacatgaatgtttgggcggaatgtgaacagatatat
tacgaggaaggcgaatcgctgacggccaaatcttacacactacatctgtgtccgacagtt
atactccataatcttctgccattcccggtcaagtatatgttagagggtactgatggttac
caaacactagacagaggagagaacatgcctctactgaatgctggtgtcggaaaatctaac
ttggagataatcattcctaattacatggacaaagaatggtgtggccgcaacttgctcaga
gtggacattcctgatctgtccctttggacgttccactcctttgtagggtcccagaaaata
gaaatggaccttgggttccactgtaagaaggcctctggtagtatggatctctctctgtat
agtccctactggatgatcaacaaaactggacagcgtgttctctacaaggcgagtgattcg
gaggatataatggaacatcaccatgacaaccaagatgctgtcctattctcctttaaacag
aagtcatttttcgcagcaaagaaaaagaagaataagcatacagtaaaatccgccctggcc
gagccagcttttgttgttagcacaacacttactcctgacgaactacaggattatagaagg
gaaatggagtggcaggaaggaaaggatcatgggaaagataaaaaagtgaaggaatggaga
ctaagtgggaaagcctgtttgaagattggagatacagaatggtcagataaattctctcta
gacgttgttggaagttcaggaacagtccaatgcaaaaccaagacaagaacatttgaggtc
ggtgtcaacattgtcctgtcccagagcggtctaaccaagatctgtacattcacaccatat
tacatgttactgaacactgccgaccactcccttctggtcgctgaggtagcgtccactgag
acatggtacgaggtcaagtctaaagagtgtcagccattctggccccagcagacgggcaaa
gaaatgaagatgaaggccaaggttctcgggtcagactcagcaactacagagtttctcttc
aataaagcacacaacacactggccaggctgaatgacaagtatggaggtatccacgttgac
tgtcaggtaactgaagctgccatggtaacgaccctcagctcctacaaggacggtatggcc
actgttcagctggtaaaccacactgaggctgcctctgtcacattccatcaaagtgggtct
aagaacacccagctgttggggccaggacactatatgatgtatacgtgggagaacacaaca
gacaaacgggagatcgtctggacgtgtggagacaaaaaggatgtgaaaaacacactggtg
gaggacggttatggatggttcgccctgacgtctgataccaacgtctactgggtatccttc
ctggacggtatgcagagggtgttactgtttactgaggacttacagctcgccacactcgct
caacaggctggtgaactagagagaattgaacaagaaatcactgtctgtatccaaggcctt
gggctgtctcttatcaacgaccttagccagacagaggtcgccttcctgggaatcacaagt
tctggtatcatatgggaggaaaagaagaaacgctacaaggccctaagtgtgaaaaatggc
cttgttttagaagacgcttatcagaaatatctgatggagctggacttaggacacaaccct
cctgcccacctcaacctcgaaaacaagatggaggttgacttcaacgaaatgaagctgatc
cgtccaaacaagcgaggaatcagacgaagtttccaggagggaatctggctccagtacaag
acttctcctcaccagatccagctacatgccaagattaaccgacttcagctggacaatcag
atgtcaggtgctgtgttcccgacggtcctgtctccagtacccctacccaagtctgtggca
gcagacagtgtgccgaagccttttacagaagtcagtatcatgttgaggaagcaggaacat
gacaacatgctccagtttaaatatttcaaggttctgatccaggagatgcagctgaaagtt
gatcagggattccttaacaatatcatcgatcttttctcctccagtcaggatatctcccga
caacaggagacaacagaatttattaaagactgtgataaagtcaaggtgaagttgatggat
gaagttggactttccttggctgacgaacagaagaacttttatgattatcttcacttttca
ccaataaagattcatctgagtttctctctacaaggaggaggggacggcaaaccaacacag
atccacgccaatgtcatcaacatcttcctacagagtgtgggcgtcgtccttaccgatgta
caggatgttgtattcaaacttgggttcttccagaaggagcactgcttttataaccagtct
caactggtcggtcaaatgagcatgcactacgctggtcaggccatcaaacagatgtatgtc
ttggtgctgggactggatgtcctgggaaatccattcggactcttacgaggaatggcagag
ggaattgaggacctcttctatgaaccctatcagggagccatccaaggaccagaggagttt
gctgaaggtctggcccttggagtaaggagcttatttgggcatgctgtgggtggagctgct
ggtgctgtgtccaggataacaggaactctgggtaaaggttttgcggccttgaccttggat
gatgactaccagaaaaagagacgggaagctatgaacaaacgtccagcaaatgttagggag
ggactggctagaggaggaaaggggctggtcatgggtgtatttgatggcgtgactggtatt
gtcagaaaaccaatagaaggtgccaagaatgaaggagttggtggattctttaaaggtgtt
ggtaagggattggttggcgtggtaacgagaccaacaagtggtgtgatagacttcgccagc
agttccctagagggtattaaaaggataacagacttttcagaagaaattcataggataagg
ccaccaagacgtttccatggagacagagtaattcgtccatacaacaaacaggaagcagag
ggttatgctattctgagtgaaacagagaaggggaagtttgccacaacagatcactatgtc
gcccatctggtcctcagtcgggacagcaaacatgtactcctagttacagataagcgggtg
atcttcgctaaccgcggagaactatttggtcattgggatgctgactggacgtatacatgg
gtcgaaatgaaggaaccacccaagaggtcacaaaaaggcatagaaatctacctcaaggag
aaagagaagaagaagttcttgttcagcagtagtaccgctaaaaaggaagttgtcattggc
gaccagagactggctgagtggattgcaagcaaaatcaaagaaaccatgatgcgaggaaag
taa
DBGET
integrated database retrieval system
