Argopecten irradians (bay scallop): 138306854
Help
Entry
138306854 CDS
T10542
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138306854
Transcription factors [BR:
airr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138306854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138306854
NCBI-ProteinID:
XP_069103457
LinkDB
All DBs
Position
14:complement(35053504..35055582)
Genome browser
AA seq
324 aa
AA seq
DB search
MEQDMSKAQLQQTLGGVPVSNPGMGAPHQAHQGHPQNHQVHHPHQQPHSPPEQTNISNGS
AGRYHPGHQPHSPPEQTNISNGQSGGLTAQQKKDLDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLTETEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKTLMKKD
KYALPGMPTGAPLQPGREGAGMYPMNGYMPNGYMMHDPNAYHMANQMGLAGQYGYPPNMA
TQPMAMPSNQMTTGSYMNGTQSYTMSMAYGGMAASQVPQSSIKREPQSGAPGQPVPSGGR
NPGDLREMIRGDQVPVHYENPWRD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacatgtcgaaagctcagttacaacaaactttaggtggggtaccggtatca
aacccggggatgggggcaccccatcaggctcaccaggggcacccccaaaatcatcaggtg
caccacccccatcaacaacctcactcaccccccgaacaaacgaacatttctaacggaagt
gcgggtcgttaccaccctggacatcaaccccactccccacccgaacaaaccaacatttct
aatggacaaagtgggggcctaactgcccaacagaagaaagacttggatagggtcaagcgc
cctatgaatgcgtttatggtgtggtcgaggggtcagcgtagaaaaatggcccaagaaaac
ccaaaaatgcacaactctgaaattagtaagagactcggagctgaatggaaacttttgaca
gaaactgagaaacgtccgtttatcgatgaagctaagagacttcgtgcgatccatatgaag
gaacaccccgattataaatacaggccgcgcaggaagacaaaaactctcatgaaaaaggac
aaatacgcgctacccggaatgccgaccggtgccccccttcagcccgggagggaaggggct
ggtatgtaccccatgaatggttatatgccaaacggttacatgatgcacgatcccaatgca
tatcatatggcaaatcaaatgggacttgcaggacaatatggttaccctccaaatatggct
acacaacctatggctatgccttcgaatcagatgacaacaggatcatatatgaacggaaca
cagagttatacgatgtccatggcttacggcggaatggcagcttcccaagtcccccaatcg
tccatcaagagggagccacagagcggagccccgggacagcccgtcccctcgggaggaagg
aatcctggcgacctacgagaaatgattagaggagatcaagttccggtacactacgaaaac
ccatggagggactga
DBGET
integrated database retrieval system
