Argopecten irradians (bay scallop): 138307277
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Entry
138307277 CDS
T10542
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04136
Autophagy - other
airr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138307277
04136 Autophagy - other
138307277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138307277
03029 Mitochondrial biogenesis [BR:
airr03029
]
138307277
Membrane trafficking [BR:
airr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
138307277
Others
Specific organelles associated proteins
Auto phagosome
138307277
Mitochondrial biogenesis [BR:
airr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138307277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT140_1st
Tricorn_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_ACSF4
TMF_DNA_bd
ChaB
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
138307277
NCBI-ProteinID:
XP_069104031
LinkDB
All DBs
Position
14:17525087..17553629
Genome browser
AA seq
551 aa
AA seq
DB search
MATAGATQWKEILILQLKCRNNKERRPFEGLVQSHNKLFENSTSLKSKNVHLTLETEKLK
EENLSLQIKVESGGGGGGGNSEKNSNLEHKLYKLQEELTELHRKRGENAQQLIDLNTALQ
EKEKELQAKDNRLSDATATELAMKNAIKNLELTIMELEATNQMLKDEHQALQLAFTALEE
KYRKAQEDNRELVERWMDQKSKDADKLNAENDYVMRRRQAKLQKDLEEAARENINVAERG
AMVMGTAICLQASLPERAQYKFDAHEGEVNAVRWSPSGAKFATGGTDRKIKLWEVIGGKC
ESKGFLMGSNQGITSVDFDPEESLILGASNDFASRVWSLSDQRLRHTLTGHSGKVLAAKF
LGDSSKVVSGSHDRTLKIWDLHSRACTKTIFAGSSCNDLVTLHGTNVVSGHFDKRVRFWD
SRSDSSTNEILLQGRLTSLDLSPDRSSLLCSTRDDTLKVIDLRMNQVSKTLYAEDFKVGC
DWSRAVFSPDGNYALAGSNDGALFIWNLSKSKVEKVLKEHNHAVIACSWHPVGSYVLSGE
RQKKVVLWSDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctggagcgactcaatggaaagagatcctgattttacagttaaaatgccgc
aacaacaaggaaagacgacctttcgagggactcgtgcaatcacataataaattgtttgaa
aattctacatctctaaaatccaaaaatgtccacctcacattagagacggagaagctgaag
gaagaaaatcttagcttacaaatcaaagtagaaagtggaggtggaggtggaggcggaaat
tcagaaaaaaattccaaccttgaacataaactttacaaactacaggaagagttgacggaa
ctacacaggaaaaggggtgaaaatgcccaacagttaattgatttaaacacagcccttcag
gagaaagagaaggagctacaggccaaagacaacagactcagtgatgctactgccacagag
ttagccatgaagaatgcaatcaagaacctagaacttaccataatggagctggaggcaaca
aaccagatgttgaaagatgaacatcaggccttacagctagcatttactgctctggaagag
aaatatcgtaaagcacaggaagataatcgcgagctggtggaacgatggatggatcagaaa
tctaaagatgcagacaaattaaatgcagaaaatgactatgttatgaggcgacgacaagcc
aaactacaaaaagatttagaagaagctgctagagaaaatatcaatgtagccgaaagaggg
gcgatggtgatgggtacagcaatatgtttacaggcttccctgccagaaagagctcagtat
aaatttgatgcacatgaaggggaggtaaatgctgtgcgatggagtccatcaggtgcaaag
tttgctacgggtggtacagacagaaaaatcaaactatgggaagttataggtggtaaatgt
gaaagtaaaggattcctaatgggcagtaatcaaggtataacatcagtggacttcgaccca
gaggagtccttgatacttggagcttccaatgactttgccagtcgagtatggtctttgtca
gatcagcgacttcgacacacactaacaggccacagtggaaaggtgttggcagccaaattc
ctcggagattccagtaaagtagtgtctggtagtcacgacagaaccctgaaaatctgggat
cttcatagcagagcatgtaccaagacaatatttgctgggtcaagttgtaatgatttagtg
acgctccatggaacaaatgtggtgagtggccacttcgacaaacgagtgagattctgggac
agtagatcggacagtagcacaaacgagattcttcttcagggtagactaacatcactcgat
ctttcgccagaccgaagttctctgctgtgtagcacgcgagacgacacacttaaagtcatt
gatctacgtatgaaccaagtttccaaaactttatatgcagaagacttcaaagtgggctgt
gattggtcgagagctgttttcagtcctgatggtaactacgccctcgcagggtccaatgac
ggagcgctgttcatctggaacctttctaaaagtaaagtggagaaagtcctcaaagaacac
aaccatgctgtgattgcctgttcctggcatcctgtaggatcatacgttctcagcggggag
agacagaagaaagtagtgttatggtccgatctttga
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