KEGG   Argopecten irradians (bay scallop): 138307913
Entry
138307913         CDS       T10542                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138307913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:airr03041]
    138307913
Spliceosome [BR:airr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    138307913
 Complex B
    138307913
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3
Other DBs
NCBI-GeneID: 138307913
NCBI-ProteinID: XP_069104942
LinkDB
Position
14:10044243..10066052
AA seq 943 aa
MADKSLPWGLRTDKLTPGSTKAISESKLKAFEVGTMNIGKKSLSKREQEELKKKKDAHAA
AQVYEEFVASFQDSGKQANKAWVKGGVVNPEKSSPSTKPEKSKLYKPTSKLAELASTFQS
MKEAKKKDDDGDDRSEFRSFSDRSSFSVGKKKKEEQKKRSNLEIFKEELKQIQLEREERH
RWKAGIRNQGFESVPEPPEDRFGKFEASLEPGFNKADSMRLGPYDPADESTTNIYVGNIN
PKMTEQQLCETFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERAMNSLKGKE
VMQFEMKLGWGKAVPIPPHPVYIPPALVELTQPPPPSGLPFNAQPSKSSRRLRSEKLYGN
VPPPGINGSSKDEPAEDLEKTLAKAVVKVVIPTERNLLCVIHRMIEFVVREGPMFEAMIM
NREISNPMFRFLFDNQSPAHLYYRWKMYTILQGDSPYRWRTDEFKMFKGGSLWKPPPMNP
YTQGMPDELVREELNFDQEEEVVSKKGQLTDSQRDRLEDTLRELTPERMKVGDAMVWCLD
HAEAAEEIVECITESLSILQTPIPKKIARLFLVSDILFNSSAKVPNASFFRKCFQIKLRE
IFKDVHETYVNIDGRLKAEQFKQKVMGCFRAWEDWAIYPNDYLINLQNIFLGLVPTKQTV
TKLPGIDHSDSEDLDGAPIEDLDGAPLDQSKEDVDGKALVEYDGEPYSEDLDGAPIGDMR
RKQDREEDRRASPVAPKFFKSKWETVDDAELEAQAMTTSKWDLLDNQEEEEEEEEEKPQG
EMYEDIDGQPLDEEEGYSRGTASDEESFQDYSDYHHKQEMTEERRAKLREIEVKVMKYQD
ELEAGKRSRKSHITISQQVEHYRKKLLQKETDSPGRDPRKRHRSRSYSPSAYRSISSSPK
RSSKRMKSPKRSRRSRSRSPHKRSTSRSPSRHRHKHKKSKHRM
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggcggacaagtctttgccatggggtttacgtacggacaagttaaccccaggctctaca
aaggcaatatccgaaagtaaactaaaggcttttgaagttggtaccatgaatataggaaag
aaatctttgtcaaaaagggaacaagaagaacttaagaaaaagaaagatgcacatgcagca
gctcaggtttacgaggagtttgtggcctccttccaggatagtggaaaacaagcaaataag
gcctgggtcaaaggaggagttgtcaatccagagaaatcatcaccatccacaaaacctgag
aaaagcaaactgtacaagcctacctctaaactagctgagctggcgtccacatttcagtcc
atgaaagaggctaaaaagaaagatgatgatggggatgatcgttccgagttcaggtctttc
tccgatcgatctagtttcagtgtagggaaaaagaagaaggaagaacaaaagaagaggagt
aatctagaaatttttaaagaagaattaaaacaaatacagcttgagagggaagagcgacac
cgatggaaggctggtatcagaaatcaagggtttgaatccgtgcccgagcctcccgaggac
agatttggaaagtttgaggcatccttagaacctggattcaataaagctgacagtatgcga
cttggtccgtatgaccctgcagatgaaagtacaacaaatatatatgtaggcaacattaat
ccaaagatgacggaacaacagttatgtgagacgttcgggaggtatgggccgctcgccagt
gtaaaaataatgtggccaagaacggatgaagagcgatccaggggaagaaattgtggtttt
gttgccttcatgaacagaaaagatggagagagagccatgaattctctcaagggcaaagaa
gtgatgcaatttgaaatgaagctaggttggggtaaggcagtgccgatacccccacaccca
gtctatatacctcccgctttagtcgagttaacacaaccaccgcctccatctggcttaccg
ttcaacgctcagccgagcaagagcagtcgaaggctgcggtcagaaaaattatacggcaat
gtgccccctccgggaattaatggatcgtcaaaagatgaacctgctgaggatctggagaag
actttagccaaagctgttgtgaaagtggtaattcccacagaaagaaatcttctgtgtgtg
atacatcgaatgatcgagtttgttgttcgagaaggtcccatgtttgaagccatgatcatg
aatcgagagatcagtaaccctatgttcaggttcctgtttgacaaccaaagtccagcacat
ctctactaccgatggaaaatgtacacaatccttcagggtgactcgccataccggtggaga
acagacgagtttaaaatgtttaagggaggctctctatggaaaccacctcccatgaacccc
tacacacagggcatgccagatgagctggtacgtgaggaactcaactttgaccaggaagag
gaagttgtcagcaagaagggccagttaacagatagccaaagagaccggttagaagacaca
ttacgtgagctgaccccagagagaatgaaggtcggtgacgccatggtatggtgtttagac
cacgcagaggctgcagaggaaatcgtagaatgtattacagaatccttgtcaattcttcag
actccgatccctaaaaagattgcgaggttgtttctggtttctgatattttatttaacagt
agtgctaaggtccctaatgcttcattctttagaaaatgttttcaaattaaattaagagaa
atattcaaagatgtacatgagacttacgtgaatattgatggtcggctaaaggcagaacag
tttaaacaaaaggtaatgggctgtttccgtgcgtgggaagattgggccatttatcccaat
gattatttgataaacctacagaatatcttcctaggtctcgtccctacaaagcagactgtc
accaagctaccaggcattgaccattcagacagcgaggaccttgacggtgctcctatagaa
gacttggatggtgccccacttgaccagtcaaaggaagatgtcgacggtaaagctctcgtg
gaatatgatggtgagccatactcggaggatcttgacggggctccaattggcgatatgaga
aggaaacaggaccgcgaggaggatcgcagggcatcacctgtggctccaaaattctttaaa
tccaaatgggaaactgttgatgatgctgaactagaggctcaggctatgacaacctctaaa
tgggatctccttgacaaccaggaggaggaggaagaagaggaagaagaaaaacctcaggga
gagatgtatgaagatattgatggacaacctctagatgaagaggaaggctactctcggggg
acagcttcagatgaggaaagtttccaggactactccgattatcatcataaacaggagatg
acagaggaaaggagggcaaaactgagggagattgaggtgaaagtgatgaagtaccaagat
gaactggaagcaggaaagagatctaggaaaagtcacatcacaatatcccagcaggtggag
cactacagaaagaaactactacagaaggaaacagactcgcctgggagagatcctagaaag
cgacatcgatctagatcatattctccatcagcgtatagatcaatttctagtagtccaaag
agaagctccaaaagaatgaaaagtcctaaaaggtcaaggagatcaaggtcaaggtcgcca
cacaaaaggtcaacgtctagaagtcctagtcgacatcgtcacaaacataaaaagagcaaa
catcgaatgtag

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