Argopecten irradians (bay scallop): 138308229
Help
Entry
138308229 CDS
T10542
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03420
Nucleotide excision repair
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138308229
09124 Replication and repair
03420 Nucleotide excision repair
138308229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138308229
03400 DNA repair and recombination proteins [BR:
airr03400
]
138308229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
airr04147
]
138308229
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
138308229
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138308229
TCR (transcription coupled repair) factors
Cul4-CSA complex
138308229
Exosome [BR:
airr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138308229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF1776
Motif
Other DBs
NCBI-GeneID:
138308229
NCBI-ProteinID:
XP_069105312
LinkDB
All DBs
Position
14:complement(20120887..20142851)
Genome browser
AA seq
806 aa
AA seq
DB search
MPLSNANKPDLQEQQKFDEEVSYRKRKSRENLSPTNHKRVRHNSDEAPMTESQKRANFSA
LSSPSNGLNRHASPLANSKPGAAKKLVIKNFKEKPKLPENFQQQTWEKLRDSVEAIHTSH
SIQSSLEELYQAVENMCSHKMSANLYEQLKQACENHVKANIKQFLEENIGYEQFLKMMDR
CWKDHCRQMIMIRSIFLYLDRTYVLQTSSILSIWDMGLDLFRSQIVGHHIVQTRTVDGLL
QLIQRERSGEAVDRQLMKSLLRMLSDLQIYQDAFEKKFIEATDRLYAAEGQRLMQERDVP
EYLAYVDKRLNEEAERLLHYLDQATKKPLVCCVEKQLLEQHLVQILQKGLDQLLTENRIT
ELTLMYQLFNRVRDGLKDLCVAFAVYIKSTGRLIVINSDNDPEKDKDMVQSLLDFKDKTD
NIINVCFNKNEKFVNAMKESFENFVNVRQNKPAELIAKYVDSKLRAGNKEATEEELERLL
DKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAAFTSKLEG
MFKDMELSKDFMLTFKQYMQHIDSPGGIELTVNILTMGYWPTYTPMDIHLPLEMIKFQEI
FKKFYLGKHSGRKLQWQPTLGHCVLKASFEGGKKELQVSLFQTLCLLLFNDGVKFSLDAI
RQATAIEDGELRRTLQSLACGKARVLQKHPKSKEIEDDDVFIYNEGFKHKLCKIKINQIQ
MKETQEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKPADLK
KRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcaaatgctaacaaaccagatctgcaagaacagcagaagtttgacgaggaa
gtgagctacagaaaaagaaaatccagggaaaacctttctcctacaaatcacaaaagggtt
cgtcacaactcggatgaagcaccgatgacagaatctcaaaagcgagccaatttctcagca
ttatcaagtcctagcaatgggttaaacagacatgcgtcacccttggcaaacagcaagccc
ggggcagcaaagaaacttgttataaagaatttcaaagaaaaaccaaagttgcctgaaaac
tttcagcagcaaacatgggagaagttgagagattccgtcgaggcgatccacacaagtcac
tccatccagtccagcctggaggagctttaccaggccgtcgagaacatgtgctcccacaaa
atgtccgccaatctgtacgagcagctcaaacaagcatgtgaaaaccatgtcaaggccaat
atcaagcagttcctggaagagaatattggatatgaacagttcctgaagatgatggacaga
tgctggaaggaccactgtagacaaatgataatgatcagaagcattttcctgtacctagat
cgtacatatgtcttacagacttcctcaatcctatccatctgggacatgggcctggactta
tttcgatctcagatcgttggccaccacatcgtacagacacggactgtggatggactacta
cagctgatacagagggagagaagtggtgaggccgtggatagacaactgatgaaaagtctg
ttacggatgctgtctgatctccagatttatcaagatgcctttgagaagaagtttatcgag
gctacagatagactttatgctgcagaaggacagcgacttatgcaggaacgagatgttcca
gaatacttggcatatgttgacaagagactgaacgaggaagctgaacgactgctgcactac
ctggatcaagctacaaaaaaaccccttgtttgctgtgtagagaaacagctgttggaacaa
catctggtacagattcttcagaaaggtttggaccagttgttgacggagaacagaatcaca
gagctaacactgatgtatcagctgttcaatcgagtgagagacggactcaaggatttatgt
gtggcgtttgctgtgtatatcaagtcaactggtcgcctaattgtgataaatagtgataat
gatccagaaaaagacaaggatatggtccagagtcttctagatttcaaggacaaaactgat
aacattatcaatgtttgtttcaacaaaaacgaaaaatttgtcaatgcaatgaaggaaagt
tttgaaaactttgtcaatgttcgacagaacaagccagcagaacttattgccaaatatgtg
gattcaaaattacgtgctggaaacaaagaggctacagaggaagaattagagagactactt
gacaagataatggtcctcttcagattcatacatggtaaggatgtgtttgaggctttctat
aagaaggacctggcaaagagactcctggtgggaaagagtgcctctgtggacgcagagaaa
tccatgttgtctaaactcaaacaagagtgcggtgcagctttcacaagtaaattagaggga
atgttcaaagatatggagctgtcaaaggatttcatgctgacattcaaacagtatatgcag
cacatcgactcgcctggcggtatagaactgacagtgaatatcctcacgatgggatactgg
cccacctacacccctatggacatacacctaccattggagatgataaagtttcaggagatc
ttcaagaaattttacctcggcaaacacagtggaaggaaacttcagtggcagccgacgctt
ggccattgtgtactgaaggcttccttcgaagggggaaagaaagaactacaggtgtccctg
ttccaaaccctctgtctccttctcttcaacgacggcgtcaagttctctcttgatgctatc
agacaggctacagcaattgaggacggtgaactgcgaaggacactccagtcactggcttgt
ggtaaagccagagtgttacagaaacatccaaagagcaaagaaatagaggacgatgatgtt
tttatttataatgagggcttcaagcacaaactttgtaaaatcaaaatcaaccaaatacag
atgaaagaaacgcaagaagagaacacgagtacaacagaacgcgtgttccaggacagacag
taccaagtggacgctgccattgtccgcatcatgaagacccgaaaaacacttacacacaat
cttcttatatcggagctttataaccagctcaaattcccagtcaagcctgcagatttgaag
aaaaggatcgaaagtttgattgacagagactacatggaacgtgataaagataatccaaat
cagtatcattatgttgcttga
DBGET
integrated database retrieval system
