Argopecten irradians (bay scallop): 138308448
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Entry
138308448 CDS
T10542
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
airr03016
]
138308448
Enzymes [BR:
airr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
138308448
Transfer RNA biogenesis [BR:
airr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
138308448
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
138308448
NCBI-ProteinID:
XP_069105531
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All DBs
Position
15:complement(17859105..17879827)
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AA seq
292 aa
AA seq
DB search
MDERQRIRLFVCNDNVLVWNAEDASYLRDEVRIIGNQIGCLPRFPRQNNFLGLPLYLMPE
EVTLLVNKGIGVLVKGDNPLETPSQQQIEEYHQLCEKNYKEQVQLFREDRKDEIKQNLPK
IIEGKKTKRKKELEEKKKAGEEVDESELDDEITVDVDSIPIPHLPRSHALVQLFTESPWK
KENEEDATVPWNFPSTILEKTRSHVFQDLWEKGYYLTSGAKFGGDFLVYPGDPSKFHSHY
VAICLEHEKPLTSLDLITMGRLGSNVKKTVVLCSLDNDSRIQYTSLQWTGIS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagacaacgaatccgactattcgtgtgcaatgacaacgttttggtatggaac
gctgaagatgcatcctacttgagggatgaagtgagaattattggaaaccaaattggatgt
ttgccaagatttccgagacagaataattttttagggttgccactgtacttgatgccagag
gaagttactttactagtaaataaaggtattggagtactggtaaagggagataatccactg
gaaactccatcacaacaacaaattgaggaatatcaccaactatgtgaaaagaactataaa
gaacaggtccaactttttcgagaggatagaaaagatgaaataaaacaaaatcttccaaaa
atcatagaaggaaagaaaacaaaaagaaagaaggaattagaagaaaagaaaaaagcagga
gaagaagttgatgagtcagagttagatgatgaaataacagttgatgtagacagtattccg
attcctcacttaccacgaagtcatgccttggtgcagctgtttaccgaatctccatggaaa
aaagagaatgaagaagatgctacagtgccctggaatttcccatcaacaattttagaaaag
acacgcagccatgtttttcaggatttatgggagaaaggatattaccttacctcaggtgct
aagtttggaggagatttccttgtctacccaggggatcctagtaaatttcactctcattat
gttgccatatgtttggaacatgaaaaacctttgacctctctggacctcatcactatggga
agactggggtcaaatgtcaaaaagacagtagtgctgtgttcattggacaatgattctcgc
atacagtacacctcattacagtggacaggaatcagctga
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