Argopecten irradians (bay scallop): 138309043
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Entry
138309043 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138309043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138309043
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138309043
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
HECT type E3
138309043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
138309043
NCBI-ProteinID:
XP_069106243
LinkDB
All DBs
Position
15:6569444..6614611
Genome browser
AA seq
3051 aa
AA seq
DB search
MTSVHCVVHPLPGTDDQLNDRLREVAEKISHHGFSSPLAFAAIRNLTVVQCVVGPNYIAL
LLEDGRICRISFAVVNDRLDLNKAENKPATKISRPERERTSVPRAGTHVVDSPMVLVSDV
LGSNAAEQTAGRWGTAVTTAGTAVTRNNNQQAYSRMQRAVHVSRGRRSGVIVGTRPLVPA
SVVPEDLISQCQVVLQGKSRNLIIRELQRTNLDVNLAVNNLLSRDDEGEADDDDSQDSYM
PDDLISLLDSGIHADHPSVIIDADTMYNEDVFGYSTLRTRGSGTRSRLGDRERDLDRDRE
RESIFRIRDRRRLDNTLRDEALKAIDRDKAENMEAENLKKQTLSGQSPVALGEELQFWTE
KEGNCPKFSHIAAMHSELVAVGTNGQLYSWRWNDPEPYKNMDNPNLKHPKVTSLCLVNEK
IVGLSACNVRASVFTESDKVATWVDETLNTVSSKLEHIAQTFPEFTTDKIVSLHTCSLYT
CARLESGALYWWGVMPFAQRKKLVERTKSKKKKTKDGPASVSSSGASDIVTGTLVCLRSS
PMYHAGALAFATIDGVPKVGQLLGSAWSLSDTCRFKLIKTPPSEPKPEVKLEVKVSESRM
EMPPPPSPDSSTCSDHSGPTLVSPASLKRKKAPTSIKEVEKKDEESWPLKNVIFVEDVKT
VPVGKVLKVDGAYAAVRFQVKDSQDPGASKEDLTSLLQDCRLLRKDDLQVVKSASAPRLP
DCFQKTPKKVTISENGQILAVAVDCDGIHVICRSGARLSYLVYNLTTGKVEQDSVFPTDA
QAFMGSHRSDITLHNTGDELLVQLQDGNGAIYPLAKDCTDGIRDPLWLNLPPVRCLGMRV
QSLNNIIPNMKNKAAVLVLAVELQVLIPHILRCNLEKVKSILASLEKEPGTASSQKLLQD
ILREHCDGNRNIMHTCVAMCIPTSNKDYDNDTAAAGTTTTITSTTTTTSSAFTSALEAIN
AVSSAVDALAAIQSRSTTDSSSRSVTLREMMRRASSAARAVSGMEVRDREERDEAAIATP
TISWNPDPPPSYESLYPEASTISMAPVKLEEKERRTIAGQMLHLLCDSPALQPHLRDLLS
ARNAEGCTPFMQAVKGCAYAGASTLFDCAKKLASSDCGEVDKPSLMSMVYPTGSSLDNSP
LQVLCCNDTCSFTWTGREHIKQDIFECKTCGLTGSLCCCTECARVCHKGHDCKMKKTSPT
AYCDCWEKCKCKALIAGQQGPRFDLLNRLLSETDLVVLPNSRGENILLFLVQTVGRQVVE
QRQYRASRPRVPAPRKPIVTDIGQWTPRPTGHKYNKSSKSQLATNVEMPEHDLDPPRFSR
RALERILNDWTAVKAMILSGKKQSRTNSPDLMYEDQLYLDSQSGTARLDKFTHNLLVKCS
TEMLDTLLTTIIREMQNDSIEGRKAEARTIAQRFLRSVARIFVVLNVEMTPSTNKKKSST
LTSCQPLVKCKRAFQALINIAIEELCEIANSLIAPVRMGVTRPTAPFSLVSANGEAIQGS
EEVFNVDPIPPRSEPTDTDTHPVTAYMPHTSQARGQPAHQNTDRDDDDIMAADVEEVEVV
DGAEDEGSDHDDRDDHQSEHSDADHGQAEPDENVAESDMDLDLLAESDSDSDSSSHSNQD
NVSVQRSAVTAATAGSDAGLGSLAHFSEDSGESSNQEDDYESDGDQSDQNDADNLNYIDD
QLERCNTSGTHGQRTLQAPQTMQWAIRQREATTARPPPATGTTTNTGGSGGLIYIDPTTL
RRTTTVTTTTPAVQDTAVTMTTTASQLARAFGIVVRQIADLLTMLQDYHALAPSLPRVLD
ITDQDSIDLQLYTEDHLKITWEWLVDVMDATEAQLRFGSALSHTTDPANPGHPLHSNYVR
TMRDRSTREENRILQVLDRRRARFGTIGSDGNVARRDFLNYALSLMRSHNDEHSDTLPSL
DISAMRHVAYVFDALIYYMRSSTDTDSEVFRDGISVISWDHDENENEEHEDEPVNNSLSM
DAESVDGESDVTAKSGRKHSFFHRTDSTIFLGCPPPDPFQTPLVEALPLADQPHLLQPNA
RREDMFGMIHHSVPPHRGTVDSGASSQSSPHRTHFDKLPVRMGFASRMSESNSGHSSGPV
FSLSSGVQQAAMAPDLAFSNPSVIVKPSNSSSVGATPVPMETNSRAAVETIVQQATNIVL
QGSSSLGASSGILGSSSEVTPALPENMDTESPASPVVPKTKVESTGQGQQASVIVHASSS
SSQSPLMVQPPSSQGMAVPHDVLMIPARSDSMTYSSGNRGNSMMTSASSELTMTGLSNID
QASSSSGQRSSQSQSSTMDLSSGMDLSQGSALHSEETSSTPTGSSLTAPPSGSLSTGPSI
PSSGSLSIPPSSLGTSLGGDTIQSSSLDTPVDIVGAHENVSNTVVVETSQTGVLSPATGT
QTANRHQSNEQIYIGHNTLVSHDVLLGRWRLALELFGGVFCDDVGAEPGSVISELGGFPV
KESKFRREMEKIRNSQQKDLTLEVERDRNLLIIQAFRQLNTLFNRRTNSNSQPLAVHRVK
VTFKDEPGEGSGVARSFYTALANAVLSQEKLPALDGVMVGGKSLQYSLVQRARSRERERD
RQRAAVQRQRSRDRETRRTLSYDAPPFYMPAESATANPATTPPSVAVPNPTEGAGVPPPE
GSSSDTISQYRRQLGERLYPRVRVLQPSLAPKVTGMLLELSPAQLLLMLTSEDTLRTRVD
EAVDIILSHGRELSAEALLDLDIFNLSSSDKKKKTTGSDRRSDVEEEDDLEDSAPLFWQP
GKRGFYSPRPGKNTSERLNAFRNVGRVLGLCLLQNELCPLFLNRHVLKYILGRKIGWHDL
AFFDPVMYESLRQLVQDSEMRDASLLFTALDMNFCVELCAEEGGEQIELMSNGSDVEVNA
QNVHDYVRRYAEHRMVKVADKALKNLRLGVFDVIPSNSLEGLTSEDLRLLLNGVGDINVQ
TLISYTSFNDESGENNDKVQRFKRWFWSVVEKMNNHERQDLVYFWTSSPALPASEEGFQP
MPSITIRPADDDHLPTANTCISRLYIPLYTSKLVLRNKLILAIKTKAFGFV
NT seq
9156 nt
NT seq
+upstream
nt +downstream
nt
atgacctcagtccactgcgtggtgcatccattaccaggcacagacgaccaactcaacgac
agattaagagaagtagctgagaagataagtcatcatggcttttctagtccgctggcattt
gctgccatcagaaacctgactgtggttcagtgtgtagttggtccaaactacattgcactg
ttgctcgaggatgggagaatctgtcgcatttcctttgctgttgttaacgatcgtcttgat
ctcaacaaagctgaaaacaaaccggcgacaaagatcagtcgtccagaacgtgaaaggact
tccgtgccacgagcaggaacccatgtggtggatagtcccatggtattggtgtctgatgtt
ctgggctccaacgctgctgaacagactgcagggcgctggggtacagcagttactactgca
ggcacggcagtaacgcggaataacaaccagcaggcttacagtcgcatgcagagggcagtc
catgtaagcaggggtcggaggtcaggggtcatagtgggaactcgacccctagtcccagcg
tctgttgttccagaagatctcatcagccagtgtcaagtcgtcttacaaggaaagtccagg
aacctaataatccgagaattacagagaaccaatttagatgtaaatctggctgtgaacaac
cttttaagtcgggacgatgaaggcgaagctgatgatgatgacagccaagactcgtacatg
cctgacgatcttatctcactcctcgactctggaattcatgctgatcatccaagcgtgata
attgatgcggacacaatgtataatgaggatgtgtttggctactccaccttaagaaccagg
ggctctggaaccaggtctcggctaggtgaccgggaaagagatttggaccgtgacagagag
agggagtctatatttcgtattcgtgaccgacgacgtcttgacaacacactacgtgacgag
gctctgaaggcgatagaccgtgacaaggcggagaacatggaggctgaaaacctgaagaag
caaacattatctggtcagagtccagtggctttaggagaggagctacaattctggacagaa
aaggaaggaaattgtcccaaattttctcatattgcggccatgcattctgagctggttgct
gtcggtaccaatggacaactatatagttggagatggaacgatccagaaccttacaaaaac
atggataacccaaacttgaagcacccgaaggtcacatctttgtgcctagtcaacgagaaa
attgtaggtttgtcagcatgtaatgtacgagcttcagtgttcactgagtcagacaaagta
gccacctgggtcgacgagacacttaacacagtctcatctaagttagagcacattgctcag
acgttcccagaattcactacagataagatcgtgtcgctacacacatgttctctttacaca
tgtgccagactggagagtggcgccctctactggtggggtgtcatgccgtttgctcagagg
aagaagttagttgaaaggacaaagtcaaagaagaaaaagaccaaggacggtcctgcttct
gtatcgtcatcgggcgccagcgatattgtaactgggacattggtatgtctgcggagctct
cccatgtaccatgctggggccctggcatttgcgactattgacggtgttcccaaggtcgga
cagttgctagggtcggcctggtcgctcagtgatacatgtcgattcaaactcatcaaaact
ccaccaagtgagcccaaacctgaggtgaaactagaagtaaaagtcagtgagagtcgtatg
gaaatgccacccccaccttctcctgattcttctacatgtagtgaccacagtggccctaca
ctggtcagtccagcctcactcaagagaaaaaaggctccaacatctattaaggaagtagaa
aagaaggatgaggaaagctggcctctgaagaatgtgatatttgtggaagacgttaaaact
gtacctgtgggaaaagtgctaaaggttgatggagcttacgcggctgtgagattccaggtg
aaggacagccaggacccgggtgcgagtaaggaggacctgacgagtctactacaggactgt
cgactcctcaggaaagacgaccttcaggttgttaaaagtgcaagtgcacctcgactgcca
gattgtttccaaaagacgcccaaaaaagtgacaatatctgaaaatggtcagatcctagcg
gtggccgtcgactgcgatgggattcacgtgatctgccgctctggtgcacgattgagttac
cttgtgtataatctgacgaccggcaaagttgaacaggattccgtttttcctacggatgct
caggcttttatggggagtcacaggagtgacatcacgctgcacaatactggagatgagttg
ctggtccaactccaggatggtaacggggctatctacccactagccaaggactgtacggat
gggatccgggaccctctctggttaaatctgcccccagtaaggtgtctgggcatgcgagta
cagtccctaaataatatcataccaaatatgaagaacaaagcagctgtattggtactggct
gtcgagctacaagttctaattccacatattctaagatgcaaccttgagaaggtcaaatct
atcctagcttcgttagaaaaggagccaggaacagcctctagtcaaaagttgttacaagat
atattacgcgagcactgtgacggtaaccgtaacatcatgcacacgtgtgtagccatgtgt
ataccgacctccaacaaggattatgataatgacacagctgctgccggaacaacaacaact
ataacttctaccacgactacgacctccagcgccttcacatctgctctggaggccattaat
gcagtgagcagtgctgtcgacgctctcgctgctattcaatctcgttcaaccactgactcc
agctctcgcagtgttaccctgcgggagatgatgcggcgagcctcgtcagctgcgcgagcc
gttagtggaatggaggtacgggatagggaagaaagagacgaggctgccatagcaactcca
acgatttcctggaatcctgatccacctcctagctatgaatcgttataccctgaggccagt
actatctccatggcgcctgtaaaacttgaggagaaagagcgtcgaacgatcgcgggacag
atgctgcatctactgtgtgattcaccggccctacagccccatctaagggacctgctgtct
gctagaaacgcagagggttgtaccccgttcatgcaagcagtgaaaggttgtgcgtatgct
ggagccagtacgttgttcgactgtgctaagaagcttgccagcagtgactgtggtgaggtg
gacaagccatctctgatgagtatggtgtatccgacaggatccagtctggataactctcct
ctacaagtattatgttgtaacgacacctgtagttttacctggaccgggcgtgagcacatc
aaacaggatatctttgagtgtaagacttgtgggttgactgggtcgctgtgctgttgtacg
gagtgtgcccgagtttgtcacaaaggacacgactgcaagatgaagaaaacgtcgccgaca
gcttactgtgactgttgggagaaatgtaaatgtaaggccctcatcgccgggcagcaaggg
ccacgatttgatctcctcaaccgactgctgtctgagactgatcttgttgttctgcctaac
agcaggggagagaatatcctattgttccttgtccagactgtcggccgacaggttgtggaa
caacgtcaatacagagcgtcgcgacctcgagtcccggcgccacgcaagccaattgtcacg
gacataggtcagtggaccccaaggcccactggacacaaatataacaaatctagcaaatcc
cagctagccacaaatgttgaaatgccggagcatgaccttgaccctcctcgatttagtcga
cgtgccctagagcgaatcctgaatgactggacagccgtcaaggctatgattctgagtggg
aagaaacagtctaggacaaattcaccagatctgatgtacgaggaccagctgtacctagat
agtcagagtgggacagccagactagacaagtttacacacaacctgctggtcaagtgtagc
acagagatgctggacacccttcttaccaccataatccgagagatgcagaacgacagcatt
gaggggagaaaggccgaagcacgcaccatcgcacagagattcctacgctctgtcgccagg
atctttgttgtcctcaacgtagaaatgactccctctactaacaagaaaaaaagttccacc
ttgacatcctgccagcccttagtgaaatgtaaacgggcatttcaagctctgataaacatt
gctattgaggaactgtgtgagattgctaactcgcttatagcaccggtgcgtatgggtgtc
acccgaccaacagctccgttctccctcgtgtcggccaatggtgaagccatacaggggagt
gaagaggtgtttaatgtggacccgattcctccgcggtcagaaccgaccgatacagacacc
catcccgtaacggcgtatatgcctcacaccagtcaggcccgtggtcagccagcccaccaa
aacactgaccgtgacgacgacgatatcatggctgctgatgtggaggaggttgaagttgtc
gacggtgctgaagatgaaggtagtgaccatgatgaccgtgacgatcaccaatcagaacac
tcagacgcagaccacggccaggcagagccggacgaaaacgtagcagagagcgacatggac
cttgaccttctcgctgagtcagatagcgacagtgacagtagtagtcatagcaaccaggat
aatgtcagtgtgcagcgaagcgcagtgactgctgccaccgcgggatcagatgcaggcctc
ggtagtcttgcccatttctccgaagattctggtgaatcgtccaatcaggaggacgactac
gagagcgatggagatcagagcgatcagaacgatgcagacaatttaaattatatcgatgac
caactcgaacgatgtaacacatcaggtacacatggtcagcgcacactccaggccccccag
acaatgcagtgggcaatcagacaaagggaggcaactactgcacgaccgcctccggctacg
ggcacaacaaccaatacaggaggcagtggaggtctaatctacattgaccccacgaccttg
aggaggacaacaacagtcaccacgacaaccccagccgtacaggataccgctgtcaccatg
acgaccactgccagtcagttggctcgtgcgtttggtatcgtggtacgacagatagcagac
ttactgaccatgttacaggattaccatgcgctggcacccagtctacctcgggtactcgac
atcactgatcaggactccatcgacttacagttgtataccgaggatcacctgaagattacc
tgggaatggctggtggatgttatggatgccacagaggcacaactacgatttggctcggca
ctaagtcataccacggacccagccaaccctggccatcctcttcatagtaactacgttcgt
acgatgcgtgaccgatctacccgcgaagagaatcgtatcttacaggtcctcgacaggcga
cgtgctcggtttggcactataggttctgatggaaatgttgcacggcgagactttcttaac
tacgcattatcgttaatgaggtcgcacaatgatgaacactccgacacactccctagtcta
gacatctctgccatgcgtcatgttgcctatgtgtttgacgcccttatctattatatgcga
agtagcactgacacagacagtgaggttttccgcgatggtatctcagtaatttcttgggat
cacgatgaaaacgagaacgaggagcacgaggatgaaccagtaaacaatagtctatcaatg
gacgctgagagtgtcgatggtgaaagtgatgtgacagccaaatctggacggaaacattcc
ttcttccatcgaacagactccacaattttccttggctgcccgccaccagaccccttccaa
acgcctctagtagaagccctgccattggctgatcagcctcaccttctccagcctaacgca
cgtcgtgaggacatgtttggaatgatacatcattctgttccacctcaccgtgggactgtc
gattcaggtgcgtcgtcgcagtcctcccctcatcgtacccattttgataaactccctgtg
agaatgggttttgctagtcgcatgtccgaatctaattccggacattcaagtggacctgtt
ttttctctgtcaagtggtgtgcaacaggcagctatggccccggatctagcatttagcaac
cctagtgtgattgtaaaaccatctaactcatccagtgttggggccacaccggttcccatg
gaaacaaatagtagagctgcagtagaaacgatcgtacaacaggccaccaatatagttcta
cagggtagctcttcactgggggcgagctctggtatcttggggtcaagttcagaggtcaca
ccagccctgcctgaaaatatggatacagaatctccggcatcgcctgtggtaccaaaaacc
aaagtcgaaagtactggtcaaggccagcaagcaagtgtcattgttcatgccagctcttcc
tcgtcccagtctcccttgatggtgcagcccccgtcgtcacaaggaatggcagtgccacat
gacgtactcatgatccctgctagatctgacagtatgacctacagtagtggtaaccgtggt
aactcgatgatgacatcagccagcagtgaactcaccatgactggactaagcaacattgat
caggcgtcatcatcgtcaggtcaaaggtcatcacagagtcaaagttcaacaatggatttg
agttctggcatggacctgtctcaaggttctgctctccacagtgaggaaacctcgtctacc
ccaacaggaagtagtctgacagctccacctagtggtagtttgtcaacagggcccagtatt
ccatcgtctggatccctctcaattccaccatcttctcttggcacaagccttggtggtgac
acaatacaaagttctagtcttgacacgccagtagatattgtgggggcccacgaaaatgtc
tccaacacggtcgttgtagaaacatctcagactggagtgctctcccctgccactggaaca
cagacagccaaccgtcaccagagtaacgagcaaatctatattggtcacaataccttggtg
tcacatgacgtgttgctggggcgatggcgtctggcattggagttgtttggaggagtgttt
tgtgatgacgtcggggcggagcccggatctgtcatcagtgaacttgggggattccctgta
aaagagagcaagtttagacgcgagatggaaaaaatccgaaattcacaacagaaagatctc
acattagaggtggaacgagacaggaacttgttgatcattcaagcgttccgacagctcaac
acactcttcaaccggcggaccaacagtaacagtcaaccattggctgttcaccgggtcaag
gtcactttcaaggatgagcctggagagggaagtggagtggccagaagtttttacacagcc
ttggctaatgctgtgttgtctcaagaaaaactgccagcactagatggggtgatggttgga
ggcaagagtctgcagtacagcttggtacagagagctcgttctcgtgagagagaacgtgat
cgtcagagagcagcagtacaacggcagagaagtcgagatcgggagacacgccgtaccctt
tcatatgatgctccaccattctacatgcctgctgaaagtgctacagcaaatcctgcaacc
acaccgccgagtgtcgccgtaccgaatcccacagaaggtgcaggggtcccccctcccgag
ggcagtagcagcgacaccatatcacaataccggagacagttaggggaaagattgtatccc
agggtcagagtcctacaaccttcgctggcccctaaagtcacaggaatgttacttgagtta
tctcctgcccagctgttactgatgctgacctccgaggatacgttacggacacgagtggac
gaggctgtggatatcatcctctctcacggcagagaactgagtgcagaagcactgcttgac
ctagatatatttaatttatcgtcatctgacaagaaaaagaaaacaacagggtctgatcgt
cgtagtgatgtcgaggaagaagacgatttagaagatagtgcccccttattctggcaacct
ggcaaaagaggattttattctccgagaccagggaaaaatacatctgaacgactgaatgct
ttcagaaatgttggacgggtacttggactatgtttgttacaaaatgaactttgtccactt
ttccttaatcgacacgttctgaagtatatcctggggcgtaaaatcggctggcacgatttg
gcgttctttgatccagttatgtatgagagtctacgtcagcttgtacaagactcagaaatg
agagatgcctctctactgttcactgctctggacatgaacttttgtgtggaactatgtgct
gaggagggtggtgagcagattgagttgatgtcaaacggttcagatgtggaagtgaatgct
cagaatgtacacgactatgtacgacgttacgctgaacacagaatggtgaaggtggcagac
aaagctctcaagaatcttcgtcttggtgtttttgacgtaataccatcaaactctctagaa
ggtttgacgtcagaggatctacgtcttttgctgaacggcgttggtgacattaatgtacag
actttaatcagctacacatcatttaacgatgagagtggtgaaaataatgacaaggtccag
aggttcaagcgatggttctggtcggtagtagaaaaaatgaacaatcatgaacgacaagat
ctggtttacttctggacatcaagccctgcattgcctgctagtgaggaaggcttccagccc
atgccaagcatcacaatacgaccagcagacgacgaccatctaccgacggccaacacttgt
atttcccgtctttacatcccgctgtacacctccaaactggtactccgcaataaactgatc
ctggccatcaaaacaaaagcgttcggcttcgtctga
DBGET
integrated database retrieval system
