Argopecten irradians (bay scallop): 138309585
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Entry
138309585 CDS
T10542
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138309585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138309585
Spliceosome [BR:
airr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138309585
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
138309585
NCBI-ProteinID:
XP_069106912
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Position
15:5237213..5280592
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AA seq
642 aa
AA seq
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MSLSDREWDDLKALLDKTVQKFLGFSETALVTAALNCIDKGYDKHKTVDKLLVILDESQA
KRFADKLFGVWEDYKASNRNTRKKRKDDRDEGGETKRKRRFVDDGPPAAIPGPGNPSPGQ
LTTDKIKEMMQNAQKMIQERKTQLMVTTPSANKPTMTQTQVLMSDAMEKAKRAAELQAMI
QNKMSSLSASGVQLPYLKQLPLQNKPTPLILDEEGRTIDAMTGQAIQLQHHTPTLKANIR
AKRREQFKGLIEKPPEEISESRFFDSRVEAKSAQRQRRSFKFHEIGKFEQMAGRLRAKAQ
LDRLQNEIAYAAKKTGIASAAKLATLAPKKELQEGEVPEMEWWDAYILTGDHYSEDGQIT
RDKMFGITNLVEHPIQMKPPAEPEKPPEIPVYLTKKERKKLRRQNRQEAQKDEQEKIRLG
LQPPPEPKVRMANLMRVLGNEAVQDPTKIEAHVRAQMEKRQKQHEETNAARKLTTEQRKE
KKAKKLKEDVSLGVHVSVYRVRDLTNPSKKFKIETNAKQLYMTGIVVLYRDCNAVVVEGG
PKQQRKFRRLMLHRIKWEEDHHKGKKKDDDDSDSEEESNKTNKCHLVWEGTTTTRAFNEM
KFKVCPTELFAREHFKKCGVEQYWDLAYRGAIMETAGDDDDF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtcggacagagaatgggacgatctgaaagctctgctggataaaactgttcaa
aaattcctcggcttcagtgagacagcccttgtcaccgctgcccttaattgtatagacaaa
ggttacgataaacataaaactgtggataaactactggtgattctagatgaaagtcaggca
aaacggtttgctgacaagttgtttggtgtgtgggaagattataaagcatccaacagaaat
accaggaaaaagaggaaggatgaccgtgacgaaggaggagaaaccaaaaggaagagaagg
tttgttgatgatggccctcctgcagctattcctggtccaggaaacccgagtcctggtcag
cttaccacagataagatcaaagaaatgatgcagaatgcccagaagatgattcaggagaga
aagacgcagttaatggtgacaacaccatctgctaacaagcccaccatgactcagacccag
gtgttgatgtcagacgcgatggagaaagccaagagagcagcagaactccaagctatgata
cagaataagatgtcaagtctttctgcatctggtgttcaacttccatatctgaaacagctc
cctttacaaaacaaacctacgccgttgattttagatgaagagggaaggacgattgacgcc
atgaccgggcaggccattcaactccagcatcatacacctacgcttaaggcaaatatccga
gccaagagaagagaacagtttaaaggtttgatagaaaagccaccagaggaaatcagcgaa
agtagattctttgattctagagttgaagctaagagtgcccaaagacagagacgttccttc
aagttccatgaaattggcaagtttgaacagatggcaggcagacttcgggcaaaggctcag
ctggacagattacagaatgagatcgcctacgctgccaagaaaacgggaatagcttcagca
gcaaaattagctactctggctcctaaaaaggaactgcaagaaggtgaggttcctgagatg
gagtggtgggatgcctacatcctcacaggagaccattactcagaggacggccagatcacc
cgagataaaatgtttggtatcacaaatctagtagaacatcctatacagatgaagcctcca
gctgaacctgagaaaccacctgaaattcctgtttacctcacgaagaaagaaaggaagaag
ttacgacgacaaaacagacaagaagcacagaaagatgaacaggaaaaaataagacttggt
ttacagccgccaccagagcctaaagtgagaatggccaatctgatgagagtactgggtaac
gaggctgtacaagatcctacaaagattgaggcacacgtacgcgctcagatggaaaaacga
caaaaacagcatgaggaaacaaacgcagcaagaaagttaactacagaacagagaaaggaa
aagaaagctaaaaaactgaaggaagacgtctcgctaggcgtgcacgtcagtgtgtatagg
gtacgagatttaacaaatccatccaaaaagtttaagatagagactaatgccaagcagttg
tatatgacggggattgtggtgctatatagagactgtaatgctgtcgtagtagagggaggt
cctaaacaacaaaggaagtttagacggttgatgttacatcgtatcaaatgggaagaggat
catcacaaagggaagaaaaaagacgacgacgacagcgattcagaggaggaatctaataaa
acaaacaaatgtcatcttgtatgggagggaacaacaacgacaagagcatttaatgaaatg
aaattcaaagtgtgccccacagaactttttgctcgtgaacattttaaaaagtgtggtgtt
gaacaatattgggacctggcctaccgtggggctataatggagacggcgggcgacgacgat
gatttctga
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