Argopecten irradians (bay scallop): 138309985
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Entry
138309985 CDS
T10542
Name
(RefSeq) lys-63-specific deubiquitinase-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138309985
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
airr01002
]
138309985
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138309985
03036 Chromosome and associated proteins [BR:
airr03036
]
138309985
03400 DNA repair and recombination proteins [BR:
airr03400
]
138309985
Peptidases and inhibitors [BR:
airr01002
]
Metallo peptidases
Family M67
138309985
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138309985
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
138309985
BRISC complex
138309985
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
138309985
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
138309985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
SIKE
FlaC_arch
Nnf1
BLYB
DUF6262
ZapB
DUF4140
DivIC
Motif
Other DBs
NCBI-GeneID:
138309985
NCBI-ProteinID:
XP_069107234
LinkDB
All DBs
Position
16:complement(16550760..16566556)
Genome browser
AA seq
260 aa
AA seq
DB search
MAINCVHLEADAYMVCLTHALSTEREEVMGLLIGEIDENRVSHISAVIILRRSDKQPDRV
EISPEQLSDASTKAEDLAKELQRPLRVLGWYHSHPHITVWPSHVDVRTQAMYQMMDEGFI
GLIFSVFNEDKNTKQNRIQVTCFQSQVVDSFPTQYSPIEVPLHIVPSSGLGRACLDSLVE
LPKILSQEEAEAYHKVTSNDLDLITTIHNSSVYTKSLCHIMEVMSAPLIQSLEDRLEQNK
SQIAQLQKENDALKQQLNST
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctataaattgtgttcatttggaagctgatgcatatatggtctgtctcacacatgca
ttatccacagaacgagaagaagtcatgggacttttaatcggagagattgatgagaataga
gtttcacacatttcggccgttatcattctgaggagatctgataaacagcctgatagagta
gaaatctcgccagaacagttgtctgacgcatcaactaaggccgaggacttggctaaagag
ctccagcgtccattacgagttttaggctggtaccattctcacccacacataactgtatgg
ccttctcatgtagatgtaagaacacaagctatgtaccagatgatggatgagggatttata
ggtctaatattctctgtatttaacgaggacaaaaacacgaagcaaaatcgtatccaagta
acctgtttccagtcacaagtggtggacagtttccctacacagtactccccaatagaagtg
cccctccacattgtccccagttcggggctgggtagggcgtgtctcgactccctggtagaa
cttcccaaaattctctcacaggaagaggctgaggcataccacaaggtcacctcgaatgac
cttgaccttatcaccactatacacaactcatcagtttacaccaaatccctgtgccacatc
atggaagttatgagcgctcctcttatacaatcattagaagaccgcctggaacaaaataaa
tcacaaatcgctcagctacagaaggaaaatgatgcactaaaacaacaactgaactctacc
tga
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integrated database retrieval system
