Argopecten irradians (bay scallop): 138310247
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Entry
138310247 CDS
T10542
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138310247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138310247
Membrane trafficking [BR:
airr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138310247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
zf_RING_Vps8_fungal
Beta-prop_WDR5
WDR55
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
zf-RING_11
Beta_prop_At2g24240
EIF3I
Beta-prop_EML
zf-RING_UBOX
Beta-prop_HPS5
zf-C3HC4
zf-rbx1
XdhC_C
zf-RING_5
PHD
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
138310247
NCBI-ProteinID:
XP_069107470
LinkDB
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Position
16:20401454..20444425
Genome browser
AA seq
1392 aa
AA seq
DB search
MAETGEGGETGASSANLLDFDLQLDDAEFDLPSVENPTLESILNEPDDQESVLDEDEVSM
PSSLQLFRESGDTSSLSSQDSMLSDRPRKREKKRKGIHYSIHGSVLKPSKLKSISAQLLS
AADRVDAGMPTAMAVSALIAVGTSHGLVLIFYPKQVLKWCLGSTAVGSQYGSVSAISFNR
DCTRLLSGFAKGQITMWDLTNGKLLRTITDAHPPGTAVLHIKFTDSLVLAVCSDSGGSVF
ELEFKRLIGVRTCESKCLFSGSRGEVCAIEPLHMNLTIKDHPMQDVMVIAMATMSKVLLV
TIRPQLKVFFTHQLKGDPATLPLLAWQFVIIQVSESDRVIDPVLAFARDSTIHFYQVICN
NGQDIRCSGLQKITVQYKILGIHWLNTRTLVVMDTTEKMHVIDVRSEEEIEVLDVSEVQM
VYNTSFFKSLATGGNVSQALAFAGERACYQTLVSHGGQLFLLGTKTVHVYALRNWRDRID
VLVKQNRYQDALVLALSFYESKAKGVVGLVGSHRKKQEMVSHLMLDLLFEFVDLSMTMLC
PEQGKIEELEEHYQGIVPICVDYCLHLNKTDILFGRIFERFSADMIAHGVFLECLEPYIL
ADKLTSIPPTVMKDFVDSYEGKGMLENVEACIVHLEITSLDIHQVVSLCWGHGLYDAILY
VYNRGMNDYTTPLEDLLSTLRAAVDTGKQLSDNQIKLGNKLLVYISCCLAGRAYPLGDIA
EELVTGVKESVYQCVTCLHTKQFSDDEPAYPHLRTLLQFDTREFLNVLALAFEESEFNTE
EGVQKRQRMVDVLLQVMVESVGFTPTQVGILFTFLARQMARHENTIVVNRVLFDQVLEFL
SNPSDESRHEERQQALMELLHAGGLLQIDEERLLYLAENAKFYRVCELLYEKQHKYGKIL
SCYLRDYSRKYHSFNYINSIINSERFTELEKEDVRQEAMAHLQELVAIDCKQAAQVVITA
LSSNLSAVVKELNTNPAVLFEFLQGVMSYRDSMGSAIHQERQVVVEPHIFELYIDLMAQY
RPNDVYSYIKLNEGYRLEQTLEICRKHKLSNATAYLLEKAGDIQGAFGIMLENLQTKLKN
VTDVLLGATVQKDAKVLFSEVQLEVVVIVQLCQRNSGNMDEAQRELLWFPLLEAMMSPQR
KLKDVEDKELLEEFKEPTQHVLTSMSEYIQLPAILQKIMQDPAYSTGKFGEVKDLILGML
EKYNYEKTLRKTCKNLLNHDIHVHLRSLTSVAAKGFVTKGDNCNLCNKPFTSQSDTDSII
VFRCGHGYHLGCLRSVGSVHLLDGEELWACYLCSHTKRGHVHSSRFHRSLSNTAQSLHHT
HKDKPKEMSFDPQHLQAIDYVRRSMRTPSRIAILTELSKPDQSSRASRAGSTIFNEENFR
LKLAPPPAMEVS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggagagggaggagaaactggagcttcgtcggctaatttactcgatttt
gacctccagctggatgatgccgagtttgacttgccttcagttgaaaaccctacgcttgaa
agtatcttaaatgagccagatgatcaggagtccgtgttggatgaagatgaagtttccatg
ccatcatctctccagcttttccgagagtctggagacacttcctctttgtcaagtcaggac
agcatgctttcagatagacccaggaaacgggaaaaaaaacgtaaaggaattcactattct
attcatggatcagtgctaaagcccagtaagctgaagagtatatcagcccaactactttca
gcagcagaccgagtggatgcaggaatgcccacagcaatggctgtttctgccctgatagct
gtgggaacttcacatggactggtgctcatcttttaccctaaacaggtcctgaagtggtgt
cttggcagtaccgctgtggggtctcagtacggttctgtgtccgctatcagttttaacagg
gattgtacacgactgctcagcggcttcgccaagggacagatcactatgtgggacctgacc
aatggaaaacttttacgtacaataacagatgcccatccaccaggaacagccgtcctccat
atcaaatttacagacagcctagttctagctgtgtgcagtgatagtggaggctctgtgttt
gaactggaattcaagcgtctgattggtgtaaggacatgtgaatccaagtgtttgttctct
ggcagtcgaggagaagtatgtgctatagaacccctccacatgaacctaaccattaaagac
catccaatgcaggacgttatggtcattgctatggcaaccatgtcaaaggttttactggtt
acaatacggcctcagctgaaagttttctttacccaccagttaaagggagacccggccact
ctgcctctcctggcctggcagtttgttatcatacaggtgtcagagagtgacagagtcatt
gatcctgtcctcgcctttgcccgcgactcaaccatacatttctaccaggtgatttgtaac
aatggtcaggatatccgctgctcaggcctacagaagattacagtacagtacaagatcctc
ggtatacattggctgaatacacgaacgctggttgtcatggataccacagaaaagatgcat
gtgattgatgtgaggtcagaagaggagatagaggtgctagatgtgtccgaggttcaaatg
gtctacaacacaagtttcttcaagtccttggcaacaggtggaaatgttagtcaggctttg
gcgtttgctggcgagcgggcctgttaccaaacactggtcagtcatggaggacagctgttt
ctactgggaacaaagactgtccatgtctatgccctacgtaactggagagatagaatagat
gtgttggtgaaacagaaccgatatcaggatgctctagtcctagctctctccttctacgag
agtaaggccaaaggtgtggtgggtctagtggggtctcaccgtaaaaaacaggaaatggtc
tctcatctcatgctggacttgctttttgagtttgtggatctctctatgaccatgctgtgt
cctgaacaaggcaaaatagaagagctagaggaacactaccagggtatagttcccatctgt
gtggattactgccttcacctcaacaaaactgacatcttgtttggacggatatttgagcgg
ttttccgcggacatgattgcccatggtgtattcctggagtgtctagagccgtacattctg
gctgacaagctgacgtctatcccacctactgtaatgaaagactttgtcgatagctacgag
ggaaaaggcatgctggaaaatgtggaggcgtgtattgtccacctggaaatcaccagtctc
gatattcaccaggttgtgagcctgtgttggggacatggactgtatgatgccatcctttat
gtgtacaatcgaggtatgaatgactacacgacgccactcgaagatctgctctccacactg
agggcagctgtggatacaggcaaacagctgtcagacaaccagatcaagctagggaacaaa
ctcctggtatacataagctgctgtttagcaggcagagcctatccgctgggagacattgca
gaggaactggtgacaggcgttaaagaaagtgtctatcagtgtgttacctgtctacatacc
aaacagttctcagacgatgagccagcctacccacatctgaggacactactacagtttgat
acccgggagttccttaacgtcctcgctctggcttttgaagagtctgaattcaatactgag
gaaggggttcagaagagacagagaatggtggatgttctacttcaggtcatggtagaaagt
gtcggattcacaccgacacaagttggaattctgttcactttcctagccagacagatggct
cgccatgagaacaccattgtcgtcaaccgcgtgctgtttgaccaggtattggagttcctg
tccaacccttctgatgaatctcgtcacgaggaacgacaacaagccctgatggagctttta
catgctggcggactcctacagatagacgaggaacgacttctctatctcgctgaaaacgct
aaattttatcgagtctgtgaattgttgtatgaaaaacagcacaaatacggcaaaatctta
tcctgttacttgcgagattattcccgaaagtatcactctttcaactacatcaacagcata
ataaacagtgaaagatttacagagctagagaaggaggatgttagacaggaggccatggct
catttacaggagttggtggctatagactgtaagcaggctgcccaggtggtgattactgca
ctgtccagtaacctgtcggcggtggtcaaggaactcaacaccaatccggccgtcctgttt
gagtttctacagggcgtcatgtcttacagagattcgatgggcagtgctatacaccaggag
aggcaggtcgtggtggagccccacatctttgagctatacatagaccttatggcccagtac
cgtcctaacgatgtctacagttacattaaacttaatgagggctacagactggaacagact
ctcgagatatgcagaaaacacaagctgtcaaatgctacagcctatctactggagaaggcg
ggggacattcagggagcatttggtattatgttggaaaatttacagaccaaactgaagaat
gtgacagacgtattactaggagctacagtccagaaagacgccaaagtgttgttctctgag
gtacagctagaggtggtcgtcatagtccaactgtgtcagaggaattctgggaacatggac
gaggcacaaagggagctgctgtggttcccgttgttagaagctatgatgtctccccagagg
aaactcaaagatgtagaagacaaggagttattggaagaatttaaagagccgactcagcat
gttctgacaagtatgagtgaatatatacaactgccagcaattttacagaagatcatgcag
gacccagcatatagtacaggaaagtttggtgaagtgaaggatttaatcctgggcatgttg
gagaaatataactatgaaaagacattaagaaagacgtgtaagaatttgttgaaccatgac
atccatgtccatctgcggagccttactagtgtagcagccaagggctttgtaactaaggga
gacaactgtaatctgtgtaacaaaccgttcacttcccaatcagatacagacagtattatt
gtgttcagatgcggccatggttaccacctaggttgtctccggtcagtaggttctgtccac
ttactggatggcgaggagttgtgggcctgttacctttgtagtcacactaaacggggacat
gtccatagtagtcgatttcaccgatcactttccaacactgctcagtctttacaccataca
cacaaggacaaaccaaaagagatgtcctttgacccccaacatctccaggccattgattat
gtacgtcgttccatgaggactccatcaaggattgccattttaacagagctatcaaaacct
gaccagtcatcgcgggcgagcagagcaggttccacaatatttaacgaggaaaatttccga
ctaaaactagcaccaccaccagcaatggaagtttcctga
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