Argopecten irradians (bay scallop): 138313707
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Entry
138313707 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138313707
Spliceosome [BR:
airr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138313707
Complex B
138313707
Complex C
U2 SnRNP specific factors
138313707
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GFIT
Other DBs
NCBI-GeneID:
138313707
NCBI-ProteinID:
XP_069110146
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Position
2:complement(4989763..5022306)
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AA seq
695 aa
AA seq
DB search
MFHKGEDGKPKGFGFSGFALGKKPDEVDPAKPVSGMAGMPSNAGGRFMPGRSFGYSTNIG
KRRARNEDEYFDDDDEEGDLEYQPAPGSPGADDKNKDGSDSDDPLDAFMADIEAEVKGKM
KEGKEHKEKPKEKKKDKGVRDDIENEDVQEAFFRYMEENPMAGVILDEDETGIEYDADGN
PIIPEKNKMIDPLPPIDHTEIDYKKFEKNFYQEHEEISKLTQSQVDELRNKLGLRVSGFA
PPNPTSSFAHFGFDDELMAVIRKSEYTQPTPIQAQGVPIILNGRDIIGIAKTGSGKTATY
LWPLLVHIMDQKELEPGDGPIGLILAPTRELSQQIYHEAKKFGKVYNINVVCAYGGGNMY
EQTKACQEGAEIIVATPGRLIDLIKKKSTNLQRVTYLVYDEADRMFDMGFEPQVRSIANH
VRKDRQSLLFSATFKKKVERLARDILLDPIRVVQGEAGEANEDVNTVYRSITSWTCQVDV
ARQKPLKICVLLFPARGLDIPYIRTVVNYDVARDIDTHTHRIGRTGRAGEKGYAYTLLTE
KDKDFAGPLVRNMEVANQYVPKALMDLALQNPWFNKSRFKQGKGKKLNVGGKGLGFKERP
GLGAESCNHRTQDSTSMASFRGVGTSSRSLRVIAWSAMKQAFSAQFRSNFVAAADNIVPQ
KTGHILEPLNATRNPPPQESSEEPSNKRKKRSRWD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacaaaggagaagatggaaaacctaaagggttcggattttcaggattcgcactt
ggcaagaaacctgatgaagttgatcctgcaaaaccagtgtctggaatggcagggatgcca
agtaatgcaggtggcaggttcatgcctgggcggtcctttggatatagtacaaatataggg
aaacgaagagccaggaatgaagacgagtattttgatgacgatgatgaagaaggtgacctg
gagtatcagcccgcacccggaagtcctggtgctgatgacaaaaacaaagatggaagtgac
agtgatgatcccttagatgccttcatggctgatattgaggcagaagtaaaaggtaaaatg
aaagaaggcaaggaacataaggaaaaaccaaaagagaagaaaaaagacaagggcgtgaga
gacgacattgaaaatgaagatgtccaggaagcatttttccgctacatggaagagaatccc
atggctggtgtcatccttgatgaagatgagacaggaattgaatatgatgccgatgggaat
cctatcataccagagaaaaataagatgattgatccattgcctcctattgaccatacagaa
attgattataagaaatttgagaaaaatttctaccaggaacatgaagagatttctaaactt
acacagagtcaagtcgatgaacttagaaataaacttggtttaagggtatctgggtttgcc
cctcccaatcccacatccagcttcgcacattttggttttgatgatgaactcatggctgta
attagaaagtctgaatacacacagcctactcctattcaggctcagggagtacccatcata
ctgaatggccgagacattattggtatagccaagacgggtagtgggaaaactgccacatac
ctatggccccttctcgtacacataatggaccagaaggagctggagccaggagatggacct
atagggctcatactggcccctactagggagctgtcacaacagatttatcacgaggcaaag
aagtttggaaaagtgtacaacataaatgtggtgtgtgcttacggaggtggcaacatgtac
gaacagacaaaggcatgtcaggagggagctgaaattatcgtggctacaccgggtcgtttg
atagacctgataaagaagaaatcaactaacctccagcgtgttacatatctggtatatgat
gaggcagatcgcatgtttgatatgggatttgaacctcaagtccgatcaatagctaaccat
gtaagaaaggaccgacaatctttgctcttcagtgctacatttaagaagaaggtggagcgc
ctggctagggacatactccttgatcccatcagggtggttcagggagaggcaggggaggct
aatgaagatgtaaacacagtatatagaagtattaccagctggacctgccaagtggacgtg
gctcgtcaaaaacctcttaaaatttgtgtattgttgtttccagctcgaggtcttgacatt
ccctacattaggactgtggtgaactacgatgtagctcgggacatcgacacacatacacac
aggataggacgtacaggcagagcaggtgagaagggctatgcgtatacgctgctgacggaa
aaagacaaagactttgctggtcctcttgtgagaaacatggaggtggccaatcaatatgta
cctaaagccctgatggacctagcactgcagaatccatggtttaataaaagcagattcaag
caaggaaaaggaaagaaactcaatgttggaggcaaaggtctaggcttcaaagaacgacca
gggttaggagcagaatcatgtaaccatagaacccaagactcgaccagtatggctagtttc
cgaggagtgggtacatccagccggtccctcagagtgatcgcatggtctgccatgaaacaa
gccttctctgcccagttcagatccaactttgtggcagctgctgataatatagtaccacag
aaaacaggacatattttagagccgctgaacgcgacgcgaaatcctccaccccaagaatcc
tcagaggaacctagcaacaaacgtaaaaaacggtcgcgatgggactga
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