Argopecten irradians (bay scallop): 138313764
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Entry
138313764 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138313764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138313764
Enzymes [BR:
airr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138313764
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138313764
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
FYVE_2
Ty4_C
Motif
Other DBs
NCBI-GeneID:
138313764
NCBI-ProteinID:
XP_069110170
LinkDB
All DBs
Position
2
Genome browser
AA seq
1079 aa
AA seq
DB search
MSTEERNQPSYKKLTSKNYGVPNERQHLPLQELTRPHVESFNFFLKEGLLTAVKNIPATE
FALPNGDRVRFKLLDATVYTPRVAQGNNFAATQKVYPAECRERGVTYKGTIMIQLLWTVN
DNRSGTMEKELGAIPIMIKSEGCNLNNLSPADLIKRGEEAEEMGGYFVVNGLEKVIRMLV
MPRRNFPTCMTRPSWKNRGKQYTEFGVSIRCVLNDQSGITNILHYLSNGTATLNFTYNKE
MFFVPVVFILKALMKVTDKYIYDELIQGKEDDSYYKGCIVAMLRQTQDEGLLTQSSILKL
IGERFRVKLDLPPWYTDAEVANYLLKYCIAIHLESNTDKFNLLLYMTRKLFAFARGECAE
ESADNTMYQEVLLGGHLYCMVIKTTGLTIVADKLNFLRYISHFRCIHRGSFFAEMRTTAV
RKMLPESWGFICPVHTPDGTPCGLMNHMTALCQIVNKQYSNVHLPKLLCSMGVTPLDSPP
LGKYKDNYQVFVDGKIIGNLHSSLANSVAQKLRVMKVEGHTIRLVPPVTEVGYVPRTEFA
SQYPGLYIFTTPARMIRPVRNLSLKKNEMIGTFEQVYMNISLNDEETHKNQKLVTHQELT
EMAMLSTVACLTPFSDFNQSPRNIYQCQMGKQTMGTPCHALKHRSDNKLYRIQTPQTPMV
RPYMYDFYNIDEYPVGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHATIHKAEIISLA
EKDNSSRGQNSNLVFGFKGDKKSLEGKLDYDGLPYVGTYLQEGDPYYSYYNLQTGESKVE
IYKNAEPAHVDSVKILGNDLGTGDLNRVSIGLRIKRNPIIGDKFASRHGQKGICSMLWPV
ENMPFTESGMTPDILFNPHGFPSRMTIGMMIESMAGKSAASHGLCHDATPFKFSEDQPAI
DYFGDVLTKAGYNYYGTERMYSGSSGLELEADIFIGVVYYQRLRHMVSDKFQVRSTGPVD
QLTHQPVKGRKRGGGIRFGEMERDGMIAHGTASLLQDRLLNCSDSSTVHVCTKCGSMLSP
LLERPAAAVAAVTSEKRRKWTCMICKRTDTIQIITVPFVFRYLIAELAAINIKVQVEVK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaagagagaaatcaaccgtcctataaaaagcttacgtcgaagaattatggt
gtcccgaacgaacgtcaacatttgcctctacaagaactcaccagaccacatgtggaatct
tttaactttttcttaaaagaaggtctactaacagctgttaagaacatcccggcaacagaa
tttgctcttccaaatggagatagagttcgatttaagcttctggatgctactgtctacacc
cccagagttgctcaaggcaataattttgctgcaacacaaaaagtgtatccagcggagtgt
cgagaacgaggggttacctacaaaggaaccatcatgatacaactactttggacagtcaat
gataaccgtagtggaaccatggaaaaggagctaggcgctattcctataatgataaagtcg
gagggatgcaatctaaacaacctgagtcctgctgatctgatcaagagaggtgaagaagct
gaggagatgggaggatactttgtagtgaacggcctagagaaagtgatcaggatgcttgtc
atgccgagaagaaactttcctacctgtatgactcgaccctcatggaagaaccgtggtaaa
cagtacaccgagtttggagtgtccattcgctgtgttctcaacgaccaaagtggaatcaca
aatattcttcactatctctcgaatggtacggcaaccctcaactttacctacaataaagag
atgttcttcgtacccgtcgtatttattctgaaagctctgatgaaggtgacagacaagtat
atttatgatgagctgatacagggaaaggaagacgactcgtactacaaggggtgtatagta
gccatgttgagacagacacaggatgaaggcctcctgactcagtccagcatccttaagctg
ataggagagcgtttccgtgtaaagctggacctcccaccctggtatacagatgctgaagtt
gctaactacctgctaaaatattgcattgctattcatttggaatcaaacacagataaattc
aaccttttattatacatgacgaggaagctgtttgcatttgcccgaggagagtgtgcggag
gagagcgctgacaacacgatgtaccaggaggtccttctcggtggtcacctgtactgtatg
gtgattaagacgactggtctaacaattgtcgctgacaaactgaacttcctgcggtacatc
tcacatttccgttgtatacatagaggttccttctttgctgaaatgagaacaacagctgtc
agaaaaatgctaccagagtcctgggggtttatttgtcctgtccacaccccggatgggacc
ccctgcggacttatgaatcacatgacagccctctgtcagattgttaacaaacagtacagt
aacgttcacctgcctaagttactgtgttcaatgggagttacgccccttgactccccaccc
ctagggaagtataaggacaattaccaggtcttcgtggacggtaaaatcatcggtaactta
cacagcagtttggcaaacagtgtggcacaaaaactccgggtcatgaaggtcgaaggtcac
acaatcaggttggtgcccccagtgacagaagtaggatatgtacctcgtacagaatttgcc
agtcagtatcctggtctgtatatctttaccacgccagcacggatgatacgtcccgtccga
aacctgagcctgaagaaaaatgagatgatcggcacatttgagcaagtctacatgaacatt
agtttaaatgacgaggagactcacaaaaatcagaagctggtgacccaccaggagctgaca
gaaatggccatgctgtctacagtcgcctgtctcacacctttctcagacttcaaccagagt
ccccgaaacatctaccagtgtcagatgggcaaacagacgatgggtacaccctgtcatgct
ctcaaacaccgttcagacaacaagttgtacaggattcagacgccccagacacctatggtg
cggccctacatgtacgacttctacaatatcgacgagtacccagtaggaaccaacgcggta
gtggccgtcatttcatacacaggctatgatatggaagatgccatgattctgaacaaatcc
tccttcgaaagaggctttggacatgctactattcacaaagcagagatcataagtttagca
gaaaaagacaattcaagtcgtggccagaattccaatctagtatttggttttaaaggagat
aaaaagtcgttggagggcaaactggactatgatggactgccctatgtggggacctatcta
caggaaggtgacccatattacagctattataacctacagacaggggaatccaaagttgag
atctacaagaatgctgagccggcacatgtagactccgtaaagattctcggtaacgacctt
ggcactggcgacctaaacagggtcagcattggcctaaggatcaagagaaatcctatcatt
ggagacaaatttgccagcagacatggacagaaaggcatttgcagtatgctgtggcctgtg
gagaacatgccatttacagaaagcggtatgacgcccgacattttgtttaaccctcacggc
ttcccatccagaatgaccatagggatgatgatcgagagtatggcagggaagtcagcggcc
agtcacggactttgtcacgatgcgacgccgttcaagttctctgaagaccagccggctatt
gactactttggcgatgttcttactaaagctggctacaactactatgggactgagcgtatg
tacagcggatctagtggactagagttggaagctgatatcttcataggcgtggtctattat
caacgtctccgtcacatggtgtccgacaaattccaggtaagatccacaggtcctgttgat
caactgacccaccagccagtgaaggggaggaagcgtggtggagggatcaggttcggcgag
atggagagggatggtatgatagctcacgggacggcctctctactacaggatcgactgctc
aactgttctgattcatctacggttcatgtttgcacaaagtgtggcagcatgttatctccc
ttgttagagcgcccagcagccgcagtggcggcggtcacttcagaaaaaagacgtaaatgg
acatgtatgatatgtaagcgtaccgacacgatacaaatcatcacagtgccctttgtgttc
agatatcttatagcagaactagcagccattaacatcaaagtgcaggtagaggtcaaatga
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integrated database retrieval system
