Argopecten irradians (bay scallop): 138314373
Help
Entry
138314373 CDS
T10542
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04512
ECM-receptor interaction
airr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138314373
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138314373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138314373
Cell adhesion molecules [BR:
airr04515
]
Integrins
Integrin alpha subunits
138314373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
LYRIC
EphA2_TM
Integrin_alpha
DUF1737
Motif
Other DBs
NCBI-GeneID:
138314373
NCBI-ProteinID:
XP_069110775
LinkDB
All DBs
Position
2:9292810..9376161
Genome browser
AA seq
1094 aa
AA seq
DB search
MCVLCKTMFPRLRYACRVVSCVFLCALLFFVDSTRGFNLEVEFPDVRTGSPGSMFGYSVA
QHIDQGEGWLLVGSPTAATQQAGIIRGGAVYRCRANNTAEDCNMIPFDERGNSNQFNGSL
YLAIEDKSHQWFGATVASSGNDGHILACAPRYVYKSPKADKRAPVGTCYLARYNSFQEFT
PCKSSVDLNPNSVDQHNNQGSCQAGFSIAMSNNGERLLIGAPGAFYWQGQVHNIYLDQGN
SRKDTGEEPQASDDSYRGYSSAVGRFDADNEDDYVVGVPRAEFLLGKVELWTQNMTSIRN
ISGEQVGAYFGYAVAVEDLDGNKLHDIVVGAPFYSDYSSTKSYDTGRVYIYYQNKQGEFS
TSDIVDTEVRQFRPNKRTRYDILDGHSPKSRFGSALIGLGDLNIDGFKDLAVGAPYGGRE
NRGAVYIYLGSERGIVTKVSQVIEGVDLKPNIGTFGWSLSGGQDLDGNRYPDLLVGAYSS
NNAVYLKARPIVYVAASLKIDPKKISLDRKVCNYKGPKATHKVTCVTLFTCIKYDGIGVP
RQLVFDLSWRFDVDKKTLDQKRMYQLNTNQVVEYVNNKRLTKNKAWCQNSFVYIRNDIRD
KLAPINVQFEFKLKKRSLARRRRSLQPILDQYTPTLVNTTGHIQKECGEDERCIPDVWGT
AYTFTDNVKLGSTSNIDIVVHLENRGEGAFETMLYIELPRGVQYNGIQDRKFTIPFSCDR
YTTNDTNLVTCDMGNPLPTKAKANFTLRVTPGDIDGNMDKLMFKFVINSSNAELNSTYSD
NTFYVSIPVIQSADIIIIGRLGENQTEQIVYNDTGVAIYKDSIYGPPVVHEYDVRNLGPS
DIKESMIDIYWPSFDDVGRNLLHLTHTPEVIGQQNSLCETIVITPFNSSLIVWYGEFNRE
GEKVDVVMAKHQAEARRKRRSLDAQTGSRVSRDSTNKIVCNKNWCTIIRCRLGYMKPQDS
AVVRIRSRIWTDTLVKSGLTSEPYLITSQAVAEVRKMPYSIRVSNDTYNIATYEIGSYVN
AKKLAPQPKSVESWVIVVAVSAGLLLLLLLIVLLWWCGFFRRKRREQEETYAAKPLMTNG
ANNTKYDINSKRYE
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgttgtgtaaaaccatgtttccaaggctaagatatgcgtgtagggttgtgtcg
tgtgtgtttttatgtgctttacttttcttcgtggactcaactcgcggatttaatctagaa
gttgagtttcccgacgtacggacaggaagccccgggagtatgttcggatattccgtagct
caacatatcgaccagggcgaaggatggcttttggttggttctcccactgccgccactcaa
caagcaggaattataagaggtggcgccgtctaccggtgtcgggcgaataacacggccgaa
gattgtaatatgataccgttcgacgaacgaggtaactcaaaccagtttaatggctcatta
tatttagctatagaagataaatcacaccagtggtttggtgctactgtagcaagttctgga
aacgatggacatatcttggcatgtgctccacgatatgtttacaaatctcccaaggcagac
aagagagcaccggttggtacctgctacctggctaggtataattcattccaggaattcaca
ccctgtaaatcctcggttgatctgaatcctaatagtgtagaccaacataacaaccagggt
tcttgtcaagccggcttctcaattgccatgtcaaataatggagaaagacttctgattggt
gcccctggagcgttctattggcaaggtcaagttcacaacatttatctggatcaaggaaat
tctaggaaagacacaggagaagaaccacaggcatcagacgacagttacagaggttattca
agtgcggtgggcagatttgatgcagacaatgaagatgactatgttgtgggcgtgccaaga
gcagaatttcttttaggaaaggtggagttatggactcaaaatatgacatccatacgaaac
atttcaggagaacaggttggagcatactttggttatgcagtagctgtagaggatctggat
ggtaacaaactccatgatattgttgttggtgcaccattttattccgactacagttcaaca
aaatcttacgacactggcagagtttatatttactaccaaaacaaacagggcgagttttca
acttcagacatcgtagacacggaagttagacaattcagacccaacaagagaacaagatat
gatattttggatggacattctcccaagtctcggtttggatcagctctcattggcttaggg
gacttaaatatcgacggatttaaagatcttgctgtaggggcgccatatgggggcagagaa
aatcgcggagcagtctacatttatcttggttcagagagaggcatagtgactaaagtatcg
caggtgatcgaaggtgttgaccttaaaccaaatatcggtacatttggttggtcactttct
ggtggtcaagatctggacggtaacagatatccagatttgctagttggggcttattcctct
aacaacgctgtatacctgaaagctcgtccaattgtttatgttgctgccagtttaaagatt
gacccaaagaaaatttcacttgaccgtaaagtttgtaactataagggacccaaagccacc
cataaagtcacatgtgtgaccttatttacatgcattaagtatgatggtattggagtccca
agacagctagtttttgatctttcatggaggtttgatgttgataagaagactttagatcaa
aaacgtatgtaccagctaaataccaaccaagttgtggaatacgtcaacaataaacggctc
acgaaaaacaaggcctggtgtcagaactcttttgtctacattaggaatgacatcagagac
aaactcgcaccaatcaatgtccagtttgagtttaaattgaagaagaggagtctggcccgt
cgtcgacggtcactacagccaatccttgaccagtacacacctaccctagtaaacacaact
ggacatatacagaaagaatgtggtgaggatgaacgttgtatccctgatgtgtggggcaca
gcatacacatttaccgacaatgtcaaacttggcagcaccagtaatatagatattgtcgtc
catcttgagaaccgaggagagggtgcgtttgagacgatgttatacatagagcttcccaga
ggggtacagtacaacggaattcaagatagaaaatttaccattccattttcatgtgataga
tatacaacaaatgatacaaaccttgttacgtgtgacatgggcaacccactcccaaccaag
gcaaaggcaaactttactctgcgtgtaactccaggtgacattgatggaaatatggacaaa
ctcatgtttaaatttgtcattaacagttccaatgctgagctcaactcaacatacagcgac
aacacattctatgtgagcattccagttatccagtcagctgacatcatcattattggtcga
cttggcgaaaaccagacagaacaaattgtgtataatgatacaggagtagccatctacaaa
gacagcatatacggacccccagtcgtacacgaatacgatgtcaggaacttgggtcccagt
gatatcaaagaaagtatgatagacatttactggccgagctttgacgatgtgggtcgtaac
ctcttacacctaacccacaccccggaggtgattggccaacagaacagcctgtgtgaaacc
attgttataactccatttaattcatctttaatagtgtggtacggagagttcaatagagag
ggagaaaaggtggatgtcgtcatggcaaaacatcaggcagaggcacggagaaaacgtcga
tcactggacgctcagacgggatcacgagttagtcgtgacagtaccaacaaaatagtttgt
aacaagaactggtgtactatcatccgatgtagacttgggtacatgaagcctcaggattcc
gctgtagtaaggataagatccagaatctggactgatacacttgtgaagagtggacttacc
agtgaaccttatctaataacatcccaggctgttgctgaagtcagaaaaatgccatacagc
atacgagtatccaacgacacctacaatatagccacgtatgaaattggttcatatgtaaat
gccaaaaaattagcgcctcaacctaaatctgtggaatcctgggtaatcgtggtagcggtg
tcagcaggccttctattacttttgttattaatagttctactgtggtggtgtggatttttc
cgaaggaagagacgagaacaggaggaaacgtatgcagccaaacctttaatgactaatgga
gccaacaatactaaatatgatatcaattcaaaacgttacgaataa
DBGET
integrated database retrieval system
