Argopecten irradians (bay scallop): 138314401
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Entry
138314401 CDS
T10542
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138314401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138314401
03036 Chromosome and associated proteins [BR:
airr03036
]
138314401
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138314401
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138314401
PBAF complex
138314401
GBAF(ncBAF) complex
138314401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
138314401
NCBI-ProteinID:
XP_069110813
LinkDB
All DBs
Position
2:10187853..10212740
Genome browser
AA seq
511 aa
AA seq
DB search
MQPQRFPGQGPPMRPYQQQGYPAGPRPGGYPGQQMGPGGPQRMGVPPHAGMPPHPYAGQA
VPPTSKATSGKVKGDSQCMRPGMSPGMPPPPGPPGMQGPMDRKRPPDPRAAQHMKAKKKK
KVADKILPQRVRDLVPESQAYMDLLAFERKLDTTIMRKRLDIQEALKRPMKQKRKLRIFI
SNTFYPIKPEGEDGDESVASWELRVEGRLLEDSMSAKLGSDPAKVKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDQNVKCTVLLMLDYQPSQFKLDQRLARL
LGVHTQTRPVIINALWQYIKTHKLQDPHEREFINCDKYLEQIFESPRMKFAEIPGKLHSL
LMPPDPIVINHVIVVEGPDSRKTACYDIEVEVDDTLKQQMNSFLLSTQSQQEIASLDSKI
HETVETINQLKTNREFFLSFAKDPQEFINNWLISQTRDLKTITDVAGNPEEERRADYYYK
PWSQEAVCRYFYGKVQQRRMELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcaaagattccccggccaagggccaccgatgagaccatatcagcagcaggga
tatccagcgggtcctagacctggaggatacccaggccagcagatgggtcctggggggcca
caaagaatgggcgtacccccacatgcgggtatgcccccacacccatatgcaggacaggca
gtgccccctaccagtaaagccacaagtggaaaggtcaaaggtgactcacagtgtatgcgg
ccaggtatgtcaccaggtatgcccccacccccggggccaccaggtatgcagggacccatg
gacaggaaacgacccccagacccacgggcagcacagcacatgaaggcgaaaaagaaaaag
aaagtggctgataagattctaccacaaagagttagagacttggtaccggagtcacaagct
tacatggatctgctggcctttgagagaaagcttgataccaccattatgagaaagagactg
gacattcaggaagctctcaaacggccaatgaagcaaaagagaaaactacgcattttcatt
tccaacacattctacccaataaagccagaaggggaggatggtgatgaatctgttgcttcc
tgggaactgagggtggaagggagactcctggaagattccatgagtgccaagcttggaagt
gacccggcaaaggtgaaaagaaagttttcttccttcttcaaaagtttagttattgaactg
gacaaagatttatatggaccagacaaccatttggttgagtggcacagaacgccgactaca
caggaaacagatgggttccaggtgaaacgtccgggcgatcagaacgtgaaatgtaccgtt
ctcctaatgctagactaccagccatcacagtttaagttagaccagagattggcgcggtta
cttggtgtccacacacagacacgtcccgtcatcattaacgctctctggcagtacattaaa
acacacaagcttcaggacccacacgaacgggagttcatcaactgtgacaagtatctggag
cagatatttgagagtccgaggatgaagtttgcagagattcctggcaaattacacagttta
ctgatgccaccggatcccattgttatcaaccatgtcattgttgtggagggaccggactcc
aggaagacggcatgttatgatattgaagtggaagtagatgacacactgaagcagcagatg
aattcattccttttgtcgacacagagtcagcaggaaatagccagcctggattccaagatc
catgagacagtggagacgataaatcagctaaagaccaatcgtgaattcttcctgagcttc
gccaaggatccacaagagttcatcaacaactggctcatctcccagacccgtgatctcaag
acaattacagatgtggctggtaaccctgaggaagagagacgtgctgactattactacaaa
ccctggtcacaggaagctgtgtgtcgttacttctacggcaaggtacagcagagacggatg
gaactggagcaggccttggggatacgcaatacataa
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