KEGG   Argopecten irradians (bay scallop): 138314417
Entry
138314417         CDS       T10542                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138314417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:airr03041]
    138314417
   03036 Chromosome and associated proteins [BR:airr03036]
    138314417
Spliceosome [BR:airr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    138314417
 Complex B
    138314417
 Complex C
   U2 SnRNP specific factors
    138314417
Chromosome and associated proteins [BR:airr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    138314417
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 138314417
NCBI-ProteinID: XP_069110836
LinkDB
Position
2:10550088..10566231
AA seq 1348 aa
MATQATTREEIEEQVRNLQNKTKNLSAANVPPAEDEEESRLGLGELAQDDFIYTTNKHKY
AGYDLSIAANEEPDEDVEDAIVPGKSRSTYTAPLNLLNDTLNDKDYDPLADRRPQRVSDK
GGNYRPHLQSRIISPERYDPFANGGETPDVNAYTYAKVRASQLLDNEKKRLQQQMVEKAK
SGDLRVQNGSSGDAAAKVQQAAPQEKKKRRWDQASDDTPAKKSKSTWDKEEATTPSNSRW
DETPGRAKGAETPGATPGQSTRMWDATPGHATPGAATPGRGDSTPGHQATPSSRKNRWDE
TPRTERETPGHGSGWAETPKTDRGGDLIQDTPTPGASKRRSRWDETPGATPAGNMTPGNM
TPSMTPAGHTPGGSTPVAFTPGGGTPGGSTPSGFTPTGKTPTGQKAMAMATPTPGHLMSM
TPEQLQAYTWQKEIDERNRPLSDDELDTMFPQGYKVLQPPAGYIPIRTPARKLIATPTPM
AGTPQGFRMQTPDSKGVQVVDMQPKGNLPMMKPDDMQYFDKLLVEVDEEALSPEEQKERK
IMKLLLKIKNGTPPMRKAALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVI
DRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPD
IDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMG
CAILPHLKNLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIR
QHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCC
ATDGVEPQYIKEEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIIGRVVDD
LKDEAEQYRKMVMETIEKIMANLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGT
VVNSLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEERLMGHLGV
VLYEYLGEEYPEVLGSILGALKGIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI
DLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLAT
LLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFMFE
YIGEMGKDYIYSIAPLLEDAMMDRDLVHRQTSMAAIQHMALGVFGFGCEDALTHLLNYAW
PNIFETSPHVVQAFMGTIEGMRVGLGPSKVLQYTMQGLFHPARKVRDVYWKVYNTVYIGA
QDGMIPAYPRVPNDAKNHYIRYELDYIL
NT seq 4047 nt   +upstreamnt  +downstreamnt
atggcgacacaagccacaacgagggaagagattgaagaacaagtgcgtaacttacaaaat
aaaaccaaaaatttgtcagcggctaatgttcctcctgcagaagatgaagaggagtccaga
ttaggtttaggagaacttgcacaagatgatttcatttacactaccaacaaacacaaatat
gctggatatgatctgtccattgcagcaaatgaagaaccagatgaggatgttgaagatgcc
attgttccagggaaatccagatcaacatatacagctcctttgaacttgctaaatgacaca
ctaaacgacaaggactatgatccattggcagacagacgcccacagagagtttctgacaag
ggaggcaactaccgccctcacctgcagtctcgaataatttccccagagagatatgatcct
tttgcaaacggcggagaaacacctgatgtgaacgcctacacctacgccaaagtcagagct
tcacaactcctagacaatgaaaagaaacgtcttcagcagcagatggtggagaaggccaag
tctggagaccttcgagtccagaacgggtccagtggtgatgcagcggccaaggtccagcag
gcagcgccacaggaaaagaagaaacgacgatgggatcaagcatcagacgacacaccagcc
aagaaatcaaagagtacttgggataaagaggaggcaacaaccccttcaaacagtcgttgg
gacgagactccgggacgtgccaagggagcagaaacaccaggtgccacaccaggacaaagt
acaaggatgtgggacgctactcctggacatgctaccccaggggctgccacaccaggaagg
ggggacagtaccccagggcaccaggccacacccagttcacgaaaaaacagatgggatgaa
actcctcgtactgaaagggaaaccccaggacatggaagtggctgggcagaaacaccaaag
acagacaggggaggggacctcatacaagatacccccaccccaggggctagtaaacgtagg
tcacgttgggacgaaaccccgggagcaacacctgctggtaatatgaccccagggaacatg
accccaagtatgaccccagctggacatacccccggaggttcgactccagtggcctttact
ccagggggaggtacacctggaggatcaacgcctagtggatttactccgacagggaaaaca
ccaacaggtcagaaggccatggcgatggcaacccctaccccggggcatctcatgtccatg
acaccagaacaactccaggcgtacacctggcagaaagaaattgacgagaggaacagacca
ctgtccgatgatgaactggacacaatgttcccacagggctacaaggtattacaacctcca
gctggttatatcccgatcagaactcctgcacggaaactgattgctacacctacccccatg
gccggaactccccagggattccggatgcagaccccagacagtaaaggtgtgcaggtggtt
gacatgcagccaaagggaaaccttccaatgatgaagcctgacgatatgcagtactttgac
aagttactggtggaggtcgatgaagaagccttgtccccagaagaacagaaggaaagaaaa
ataatgaaacttctactgaagataaagaatggtactcctccaatgagaaaggctgctttg
agacaagtaacagacaaggctcgtgagtttggagcaggacccctgtttaatcaaatctta
cctctgttgatgtctccaacactcgaggatcaggagcgccatctgttggtcaaggtcatt
gaccgtatcctctacaaactggacgatctggttcgaccatatgtccacaaaatccttgtg
gtcatcgaacctctcctcattgatgaggattattatgctcgtgtagaaggcagagaaatc
atctctaatttggcaaaggcggcaggtcttgcgaccatgatttcgaccatgagacctgat
attgacaacatggatgaatacgtacgtaacacgactgcccgagccttcgctgtggttgct
tctgctttgggtatcccctcactgttgcctttcctgaaggctgtgtgtaagagtaagaaa
agttggcaggctcggcatacaggtatcaagattgtacaacagattgccatcctcatgggc
tgtgccatcctgccccatctcaagaacttagtggaaatcattgaacatggtctggttgat
gaacaacagaaggtgcgtactatcactgccttggcactggctgctttggccgaggcagcc
acgccctacggtatcgagtcctttgacagtgtcctcaaacccctctggaagggtatcaga
caacacagaggaaagggtttggcagctttcctgaaagccattggttatttaattccccta
atggacgccgagtacgccaactactacacccgagaagtgatgttgatcctgattcgagaa
ttccagtctcctgatgaagaaatgaaaaagattgtgttgaaggtggtaaaacagtgttgt
gctacagatggtgtagagccacagtatatcaaggaggagatcctaccgccattcttcaaa
cacttctggaaccaacggatggcacttgacagacgaaactacagacaattggttgataca
actgttgaaatagccaacaaggtcggtgctgcagaaatcatcggacgtgtagtagacgac
ctgaaggacgaggcagaacagtaccgtaagatggtgatggagactatcgagaagatcatg
gcgaatctcggggcagcagacatagactcgcgactggaagaacaactcattgacggcatc
ctgtacgcttttcaggaacagaccacggaggatgtggtcatgctgaatggctttggcaca
gtggtgaactctctcggcaaacgtgtgaagccctacctaccccagatctgtggtaccatt
ctgtggcgtctcaataataaatcggccaaggttcgacagcaggctgctgacctcatctcc
cgtattgctattgttatgaagacttgtcaggaggaacgtctgatgggccatcttggcgtt
gtgttatatgagtacctgggagaagagtaccctgaagtgttgggtagtatcttgggagcc
cttaaaggtatcgtcaatgtgatcggaatgaccaagatgactccacctataaaggacttg
ttacctcgtctcacacctatcctaaagaacaggcatgaaaaagtacaagagaactgtata
gacttagtgggtcgtatagctgatcgtggcgcagagtatgtgtccgcccgagagtggatg
aggatctgcttcgagctccttgagttactaaaagctcacaagaaagccattagaagggct
actgtcaacacatttggttacattgctaaagctattggtccccatgatgtgctggctaca
ctactcaacaatctcaaggtacaggagcgtcagaaccgtgtgtgtacgacggtggctatt
gctattgtggcagagacatgctcaccgtttactgttctccccgccctaatgaacgagtac
cgagtgccggaactcaacgtacagaacggtgtactcaagtctctgtccttcatgtttgaa
tatataggagagatgggcaaggactacatatactctatcgcccccttactagaggatgcc
atgatggatcgagacttggtacacagacagacatcaatggcggccatacagcacatggct
ctcggcgtgttcggctttggctgtgaagacgccctcacacatctcctcaactatgcctgg
ccaaacatctttgagacgtcccctcatgttgtccaagctttcatgggaacaattgagggg
atgagagtgggcctagggccctccaaagttttacaatacacaatgcaaggactgtttcat
ccagcgagaaaagtgcgtgatgtgtattggaaagtgtacaacacagtatatattggtgct
caggacggtatgatcccagcatatccacgagtacctaatgacgccaagaaccactacatc
cgatatgaactcgactacatactctga

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