Argopecten irradians (bay scallop): 138314554
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Entry
138314554 CDS
T10542
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138314554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138314554
03400 DNA repair and recombination proteins [BR:
airr03400
]
138314554
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138314554
Messenger RNA biogenesis [BR:
airr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
138314554
DNA repair and recombination proteins [BR:
airr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
138314554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
138314554
NCBI-ProteinID:
XP_069111040
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All DBs
Position
2:complement(14366617..14394770)
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AA seq
395 aa
AA seq
DB search
MWLISLMQDQVGKLSNVNGIIAAYVGSSPEEDTKIRNGEIDLIYGSPEAFVGDSVWRANI
QKLNVSAIVVDEFHTIATWGDDDDGTQKRAFRKWFASVGELRSLFPAATVLALSATCTVK
IKKRVMKVLEMKDDTIEIIMSPNKPNIKISVFKVPSNIEMAMYWLAEGLSSKREHFPRTI
VYCVSIKDVSKIYSYLTTEIPECASLVEMFHSETPEVKKDKIITELKVESGSPLRLVVSS
SALGMGIDVKDCQSVVLFGPPTNLVDLIQQIGRIGRDNSPSVALILYHSYHLGQLGFEVK
SLVKSTDCRRVQLLGNFLNPKELTDIKNKESGLHICCDFCTLKCSCGECESLLLEKLFSC
TQSELENDSDGDTEPYDLSDYEFEEELLMADTAND
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgatatctctgatgcaggaccaagtggggaaactgtccaatgtcaatggcata
atagcagcttacgtaggttctagtccagaggaagacaccaaaattaggaatggtgaaata
gatttgatatatggatcaccggaggcttttgttggtgactcagtgtggagagccaacatt
cagaagctgaatgtttcagcaatagttgttgacgagttccacaccattgcgacttgggga
gatgatgacgatgggacacagaaacgggctttccggaagtggttcgccagtgttggggaa
ttaagatccttatttccagccgcaactgtattggcattgagtgcaacatgtactgttaag
ataaaaaaacgtgttatgaaagtactggagatgaaagatgatacaattgaaataataatg
tctccaaacaaaccaaacattaaaatatcagtgtttaaggttccaagcaatattgaaatg
gctatgtactggttagcagaaggactatcttccaaaagagaacattttccgcgaactatt
gtatattgtgtttcaattaaagacgtgtctaaaatatattcctacttgacaactgaaatc
ccagagtgtgccagtttagttgaaatgttccactcggagacaccggaagttaagaaagat
aaaattattacagaacttaaggtagaaagtggctctcctctccggctagtggtatcaagt
agtgctctgggaatggggatcgatgtgaaagactgccaaagtgtggttctatttggacct
cctaccaatcttgttgatttaattcaacagattggtaggattggtagagacaatagccca
tcagtggctcttatattgtaccattcgtatcatctaggacagctaggatttgaagtaaaa
tctcttgttaaatccactgactgtcgcagagtacaattactaggcaatttccttaatccc
aaggagttaacagacattaagaataaagagtcgggacttcacatatgttgtgacttttgt
acactgaagtgtagctgtggggaatgtgagtcattgttgttagaaaaactgtttagttgt
actcaaagtgaacttgaaaacgacagtgatggggataccgagccatatgatttgtcagac
tatgagtttgaagaagaattgctcatggcagacaccgcaaatgactga
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