Argopecten irradians (bay scallop): 138314656
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Entry
138314656 CDS
T10542
Name
(RefSeq) heat shock protein 60A-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138314656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138314656
03110 Chaperones and folding catalysts [BR:
airr03110
]
138314656
03029 Mitochondrial biogenesis [BR:
airr03029
]
138314656
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
airr04147
]
138314656
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
138314656
Messenger RNA biogenesis [BR:
airr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
138314656
Chaperones and folding catalysts [BR:
airr03110
]
Heat shock proteins
HSP60 / Chaperonin
138314656
Mitochondrial biogenesis [BR:
airr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
138314656
Exosome [BR:
airr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138314656
Exosomal proteins of other body fluids (saliva and urine)
138314656
Exosomal proteins of breast cancer cells
138314656
Exosomal proteins of colorectal cancer cells
138314656
Exosomal proteins of bladder cancer cells
138314656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
138314656
NCBI-ProteinID:
XP_069111212
LinkDB
All DBs
Position
2:17430512..17439710
Genome browser
AA seq
572 aa
AA seq
DB search
MYRLPSMLRPVLARQVMPSLTRSYAKDLKFGPDARALMLQGVDTLVDAVAVTMGPKGRNV
IIEQSWGSPKITKDGVTVAKAVDLTDKYQNIGAKLVQDVANNTNEEAGDGTTTASVLARA
IAKEGFDKISKGANPVEIRRGVMAAVDAIVTQLKAMSKPVTTPEEIAQVATISANGDRTV
GNLISDAMKKVGRDGVITVKDGKTLNDELETIEGMKFDRGYISPYFINSTKGAKCEYQDC
LVLFSEKKISSIQGIIPALELANQARKPLLIIAEDIDGEALSTLVLNRLKVGLQVCAVKA
PGFGDNRKNTLKDMAIATGGVIFGDDGDMFKLEDIQMQDFGQIGEVTITKDDTLIIRGKG
SKEDVDKRADQIRDEIEMSTSEYEKEKLSERVAKLSNGVAVLKIGGTSEVEVNEKKDRVN
DALNATKAAVEEGIVPGGGTALIRSLVALENVTGDNEDQRAGIEIIKKALRLPAVTIVKN
TGVDPYGIVEKVASGEGDFGYDAMNGEFVNLIERGIIDPTKVVRTALVDAAGVASLLSTA
ECVITEIPKPDPPAPMGGGGMGGMGGMGGMGF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgtttaccaagtatgctgcggcctgttttggcccgtcaggttatgccctccctg
acaaggtcatatgctaaagatctcaaatttggacctgatgcccgtgctctcatgctgcag
ggtgtggacacactagttgatgctgttgccgttaccatgggaccaaagggaagaaatgtc
atcatagaacaaagttggggaagcccaaaaattaccaaggatggtgtgactgtagccaaa
gctgtggacctgactgataagtaccagaacattggtgctaaattagtacaagacgtagcc
aacaacacaaacgaggaggctggtgatggtacaactactgcttccgtactcgcccgagcc
atagctaaggaaggcttcgacaaaatcagcaagggagctaacccagtcgaaattagaaga
ggtgtgatggctgcagttgacgctattgtcacacaactcaaggccatgtctaaacctgtg
actaccccagaggaaatagcacaggttgccaccatatctgctaacggtgacagaacagtt
ggaaacctgatctctgatgccatgaagaaagtaggaagggatggagttatcactgtcaag
gatggaaaaaccttgaatgatgagctggaaaccattgaaggaatgaaatttgaccgaggg
tacatttcaccatacttcatcaactccaccaagggtgctaagtgcgagtaccaggattgt
ttggtgttgttcagtgagaaaaagatctcttcaatccaaggcattattccagccctagag
ttggcaaaccaggctagaaaacccctgttgatcattgctgaggatattgatggggaagct
ctgagcacccttgttctcaacagactcaaggttggactacaagtgtgtgctgtgaaagct
cctgggtttggtgataaccgcaagaacacactaaaagacatggccatcgctacaggagga
gtgatatttggtgatgatggggacatgttcaaacttgaggatatccagatgcaagatttt
ggccaaataggagaggttacaatcactaaagatgatactctaataattaggggtaaaggt
tccaaggaggatgttgataaacgagcagatcaaattagagatgaaatcgaaatgagcacc
tcagaatatgaaaaagaaaaactcagtgaacgagtggccaagttgtcaaatggtgtggct
gttctcaaaattggaggtaccagcgaggtggaggtaaacgagaagaaggacagggttaac
gatgccctgaacgctaccaaggcggccgtagaggagggaatcgtacccgggggtggcacc
gcactcatccgatctttagtagcgctggaaaatgtaacaggagataacgaggaccagaga
gctggtattgagatcattaagaaggccttaagattgccagctgttacaattgtaaagaat
acaggagttgatccatatggtattgttgagaaagttgccagtggagaaggagactttgga
tacgatgccatgaatggagaatttgtaaacctaattgagaggggtataattgacccaaca
aaggttgtgaggacagctttagtagatgctgctggagttgcctcccttcttagtactgcg
gaatgtgttataacggagatccccaaacctgacccaccagcacccatgggaggtggtggt
atgggtggtatgggaggaatgggtggtatgggcttctag
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