Argopecten irradians (bay scallop): 138314863
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Entry
138314863 CDS
T10542
Name
(RefSeq) integrin alpha-4-like isoform X1
KO
K06585
integrin alpha 9
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04512
ECM-receptor interaction
airr04820
Cytoskeleton in muscle cells
Brite
Cell adhesion molecules [BR:
airr04515
]
Integrins
Integrin alpha subunits
138314863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_alpha
DUF11
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
138314863
NCBI-ProteinID:
XP_069111551
LinkDB
All DBs
Position
2:23479809..23545046
Genome browser
AA seq
1060 aa
AA seq
DB search
MKVYKFIITTVLTIFILLLFTITNSNALNLDVGNAHIFSGPTNSYFGYSVAFVKNGKNEK
WILIGAPRANDTSALTLTEPGVLYRCQKGRTPSECIAIDINKDSSSHNWMGVSLDVGQQL
ILVCGHRWISSDYNMNGLCVELGRDFEQSQPRQYLTDPYKQTVNDTLIYSIGAMGMSCAY
APTGQSRVIEKAIGSPGIYETTGGVVQRSDSDGSTDVIHFPNLSQTQGQLYGYTVTYGKL
YGGDAYNMITGGPRDSMTGQVKILQGKANFALVEQLPGVQVGSYFGAALATTPLQAGMPE
YLLVGAPMYAGYNTNTWNIVEEIGRVYVYKYIPAIGKLNMTQILEGSQSQGSRFGTAISG
LNDINGDSYYDIAVGAPYEDEGRGIVYIYNGYQGGFWDIETQKLRGRDISSTLRTFGAAI
SKPFLYNSDTYYDTLIGAFMSDVAVLIYSQPTINMQVTMDVSKPVTNDIIKRNTQMFNVT
LCFSFQGKDLPALAFVEFTVNVDTNPTGKRSRVSFDKGAYNVSGSRDVQKALAQTCVKPY
TIHVQSHTDLFVPLVFSTAYKIREDTVSQCSNNVCPTVNTFNGSRSNPTITGFDKELTFE
RPGCGTDNICQVDIKVEAMAKFDNPDTDLIVGEEAKFKLEVQMKNNGQDWAYSPYTEIKV
PEYINFVTSDVACLTTSETTLVCQITEALKAQEGKLISVQFDASRAPVQDFVINVVGKTI
SSDTNPANNAQNVPVSVKSRVNEDFKGDSFPEIYVTKPETDMKLVTHKFDFENNGPSALS
SETEFIVKFPLLRLDNQDLFLLQQFIVTTQQDKVVNVSNARNTSVSCWVNRGGSRDHMAV
QLEYGEGLVSHIFDSQGLLTSEGNAFNKDCQTENCQSFTCGVTPIPAGFAVSITMNFTLN
PDTFSKVQASDSNIKEVEISSVVMINYPNDLALIDQDRDSTQKATLTVLPNKPIEESVAW
WIILLSILGAIALIACIIFGCWKCGFFKRKRPSTEESRELMATEAGGAPTTNGAEPATEH
PIEEEPRNGDVTIKKETVDESEKLVDSSKPDEITDDSNRV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctataaatttataatcacgacagtgttaacgatttttatattgcttctgttt
acgataacaaatagcaatgctttaaatttggatgttggaaacgcacatatattttctgga
ccaactaatagttactttggatattcagtggctttcgttaaaaatggaaaaaatgaaaaa
tggattttgattggtgcccctcgagccaatgatacgtcggctttaaccttaacagagcct
ggagtactttatagatgtcagaaaggtcgaacaccaagtgaatgtattgctattgacatc
aataaagacagctcatctcataactggatgggagtatcactagatgttggacaacagctt
atactggtgtgtggtcatcgctggatcagttccgactataatatgaatggactttgtgtg
gagcttggacgagattttgaacaatcacaaccgcgacagtacctcactgatccatataag
cagactgtcaacgataccctcatctacagcatcggggctatgggcatgtcctgtgcttat
gcaccaacaggtcaatcaagagtgattgagaaagccataggatctcctggtatatatgaa
actacagggggtgtggtgcaacgttcagactctgatggttcaacagatgttatacatttc
ccaaatttgagccagacccagggccagctctatggatatacagtaacgtatgggaaatta
tatggaggtgatgcttacaatatgattacaggtggaccgcgagactccatgacgggtcag
gttaagatcctgcaaggcaaggccaattttgctttggttgaacaactcccaggagtacag
gttgggagttactttggtgcggccctagccacaacgcctctccaagctgggatgcctgag
tacctactagtgggtgcccctatgtatgctggatataacaccaacacttggaatatcgtc
gaagagatcggcagagtttacgtctacaaatatattcctgctatcggaaagctgaatatg
acacaaattcttgaagggagtcagtcacaaggatcacgttttggaacagccatttcaggg
cttaacgatatcaacggagacagttactatgatatcgctgttggtgccccctatgaagat
gaaggtcgaggcattgtctacatctacaacggttatcagggaggattctgggatatagag
acccagaagttaagaggacgtgacatcagttctactctaaggacattcggggcggcaatc
tcaaaacccttcttgtacaacagtgatacttactatgacacactgattggagcctttatg
tcggacgtggcggtactgatttactcacagccaaccataaacatgcaggtgaccatggac
gtcagcaagcctgttaccaacgacattataaagaggaatactcaaatgtttaatgtgaca
ctgtgtttctccttccaaggaaaggacctccctgctttagcatttgttgagtttacagtg
aatgttgatactaacccaacaggaaaacgaagtagagtgtcgtttgataaaggagcttac
aatgttagtggcagtagggatgtacagaaagccttggctcaaacatgcgttaaaccttac
acaatccatgtacagtcccatacagacctctttgtgccgctggtattttctactgcctat
aaaatacgtgaagacactgtgagtcaatgctcgaacaatgtttgtcccactgtgaacaca
ttcaatggatcacgatcaaacccgaccataactgggtttgataaagagctaacgtttgag
agaccgggctgtggaacagacaatatctgccaagtagatatcaaagttgaggccatggcc
aaatttgataaccctgacaccgacctcatcgtaggagaggaagccaaatttaaattagaa
gtacagatgaaaaataatggccaagattgggcctactcaccctacactgagatcaaagtg
ccagagtacatcaactttgtcacatctgatgtcgcctgtttgacaacttcagaaacaacc
ttggtatgtcagattacagaagctctgaaggctcaagaagggaagcttatctctgtccag
tttgatgcatcaagagctcccgttcaggactttgtcatcaatgttgttgggaagaccatc
agttctgatacaaatccagcaaacaatgcacaaaatgtacctgtcagtgtgaagtcaagg
gtcaacgaggacttcaaaggagattcatttcctgaaatctatgttaccaagccagaaaca
gatatgaagcttgtgacacataaatttgattttgaaaacaatggacccagcgcattatca
tctgaaacagaatttatagtcaaattccctttactacgacttgacaaccaagacctgttc
cttctccaacagtttattgtgaccactcaacaggacaaggttgtgaatgtatcaaatgcc
agaaatacatcagtaagttgttgggtaaacagaggcggctctagggatcacatggctgtg
cagttagagtatggcgagggactggtcagccacatatttgattctcagggcttgctcact
tctgaaggcaatgccttcaacaaggattgtcagacagaaaactgtcaatcatttacatgt
ggtgtgactcccattcctgctgggtttgctgtatccataactatgaactttacccttaat
ccagacacgtttagcaaggttcaggccagcgactctaatataaaggaggtggagatttcc
tcagtagtgatgataaactaccctaacgatctggctttgattgaccaagatcgggacagt
acacagaaggcaactttaactgttcttcccaacaaacctatagaagaaagtgtggcatgg
tggatcatccttctcagtatcttgggcgctatagctctcattgcttgcatcatatttggt
tgttggaagtgtggattcttcaagagaaagcgtccttcgactgaagaaagcagagaacta
atggcaacagaagctggtggagcgccgactaccaacggtgcagaacccgccacagaacac
cctatagaggaagaacctaggaatggagacgtgacaattaaaaaggaaacggtagacgag
agcgagaagctggtggacagcagtaaaccagacgagataacagatgatagtaaccgagtg
tga
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