Argopecten irradians (bay scallop): 138315057
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Entry
138315057 CDS
T10542
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138315057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138315057
03400 DNA repair and recombination proteins [BR:
airr03400
]
138315057
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138315057
Messenger RNA biogenesis [BR:
airr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
138315057
DNA repair and recombination proteins [BR:
airr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
138315057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF5061
Motif
Other DBs
NCBI-GeneID:
138315057
NCBI-ProteinID:
XP_069111885
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All DBs
Position
2:29066442..29068649
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AA seq
462 aa
AA seq
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MANMSADEAIESVLATHFQIDTIKPEQRQILDALLAKKDCMAVLPTGFGKSLPYQMLIPT
KREMGVDDGMKVVVSSPLTALMQDQCDRLSKIPGIKAIYKGGCSQTDEDIESGSFDFLFA
SPETLVGDQKWRVALQQFEVSTIVVDEFHTIATWGEDEGDSKKAFRKWFSCIGELRSLHP
RASVLALSATCTQKISNRVKKILNLNSDNLVDIRISPNRENIKIVVNKVANNTEMAMSWV
VNGLQDGLFPKTLIYCMSIKDAANIYTYILQEIPDCKCIDMFHSETDYVSKSRIMDSLKN
PNSDLKIVVATNALGMGIDIKNFYNVVLYGCPKSIVDLVQEIGRDGKNATAMLLHNSYHL
RGVDSDVKAVYTKSADSDCRRATMLTPFLSTAELSDLAKKERDHSCCDLCNSICSCETCA
RTHIETLFHFVSDGSDESEMSENEAVPDVHVSDFEDELFESC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatgagtgcagacgaagcgatcgaaagcgtgttggccacacattttcaaatt
gacacgataaaacccgaacaaaggcaaatattagatgccttattagccaagaaagattgt
atggccgttcttcccacgggatttgggaagtcccttccgtaccaaatgttgatacccacg
aaaagagagatgggggttgacgatggaatgaaagttgttgttagttcgccattgacagct
ctaatgcaggatcaatgtgatcgtttgagcaaaatccctggcatcaaagcaatatataaa
ggaggttgttctcaaactgacgaagacattgaaagtggatcttttgattttttatttgct
tcaccagagacattagttggtgatcagaaatggagagttgcactgcagcagtttgaagtt
tcgactattgtcgttgatgaatttcacacaattgcgacttggggagaagatgaaggagac
tctaaaaaagcattcagaaaatggttttcatgtataggtgaacttagatcactgcatcca
cgagcatcagttttagctttaagtgcgacatgtacccagaaaatttcaaaccgagtgaaa
aaaattctaaatttgaattcagacaatcttgttgacattagaatttcaccaaacagggaa
aacataaaaatagtggtgaataaagttgccaacaatactgaaatggcaatgtcatgggtt
gttaatggactacaagatggacttttcccaaaaactttgatttattgcatgtcaataaaa
gatgcagccaatatatacacttatatactacaggaaataccagactgcaagtgtattgac
atgtttcactcagaaacagattatgttagcaagtcaagaatcatggattccctgaaaaac
ccaaacagtgacttgaaaatagttgtagcaactaatgccctaggtatgggcattgacata
aaaaacttttataatgttgtattatatggttgtccaaagtccatagttgacctcgtgcaa
gagataggacgagatggaaaaaatgctaccgccatgcttctccataactcataccattta
cgtggagtagacagtgatgtcaaagctgtttacacgaaaagtgctgattctgactgcaga
cgtgctactatgttgacaccattcctgtccactgcagagctttcagacctagccaaaaaa
gaaagggaccattcttgttgtgatttatgcaacagtatttgttcatgtgaaacatgtgca
agaacacacattgaaacactttttcattttgtctctgatggaagtgacgaatcggaaatg
tccgagaatgaagcagttccagatgtgcatgtgtcagactttgaggatgaattatttgaa
agttgttga
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