Argopecten irradians (bay scallop): 138315238
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Entry
138315238 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein-like
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138315238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138315238
Transcription factors [BR:
airr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
138315238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
Myb_DNA-binding
GATA
DUF7952
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF7573
Motif
Other DBs
NCBI-GeneID:
138315238
NCBI-ProteinID:
XP_069112205
LinkDB
All DBs
Position
1:3061464..3203672
Genome browser
AA seq
1547 aa
AA seq
DB search
MDPRIILKETNDMASPAKKRKGRESKFIKQEDEPEKVQEDIVVVPVRKGRKGSKWQGSGF
ITKRGDQILSYTSENKITYRKGDCVYLENSRRDQPYLVCGIKDFRLTKRETLVVGIKWYF
RLSEVPDSVYQLLVQDRHTESCGRESLIPNPHIRSRELFISDASDTYPVKALRGRCKVSR
YHDLSAAKDFKPEPDSFFYVLEYNPKTKRLATTQGEIRVGQSHQARLPELRRDVLPSQMP
EKMECWEELRWRPNAVMDGDLMMYLRAARSVAAFAGMCDGGSTEDGCQAASMDETTINAM
DILHRHTYDTGKGLQALVKSPALRSIEKKWTEEDSKRFIKGLRQYGKNFFKIRKELLPHK
ETGELVEYYYFWKKTPGATSNRPYRRHKRPAFKRNTRSQRPTSSDFCDQSCSASECSEDS
DDSGASRELSGYSCRHCSSTVSKDWHHAGKDKGLRCTECRLHFKRYGEERPLDSPRDSTR
DPSSRDPSPFLFQPVKEEDSVNGRHNMRTRQTRESTKGKRKERNNSTSSPDIIDSPLNSL
TPLARGRKSPSTGSTCSNSSTDTQRKVKKTAETQNKGKKRQAHSDTEDKNNKKKKAEDRS
DSESVSDSSSLSGNDEENGNEGDIENNQDDLSSSSPPSTPRSVDTDSSKPAVSSTTSTSV
QSPVTTVVTPTSTATVANLHDKVPLVRPEPAHIHHPHTSPPPVSQLLPPPPHHLHSHPLS
PVSSCPPLVPLSSSISLPSSQKLPSEKLLPTTTPSMPLSLQCSTPQDLAFHRDTSPFTSP
SLSSLHSRTPLSLPQVSTSSTLSSTSARLDDIQTNTVSIKKEPVSPPPSPKHNFGASKLT
VDTPASRQSEEKTTMNSVIVKSEPLSSFSSRADSFQPFDFSKPGPEASASSTVVPTSRVL
DSVSSRTDNKTPPLHISHPHGPPHPSHGLPHSSQAHGPPPLGINPHGPSQHGPPPPHGPS
LHGPPPPHGLPLHGPSPHGPPSSLSSSSLGPSLHGPLSHGPSPLRPIPHGASPHGSHPHI
HEPPTTPKELISPSSTLDASSTGKLTPGVKSEPNSGPVGETSVVMEEEEESDHEGGTTTP
GPDPTRCSLEMYKSENAILMKVLNRGDNNCCSRCDIVFRPHPDSKLARKRAAPSHPPVKT
EEKVVSAKKPETPPPNSTADAQITSSITPNNPYERHTPRSNYPDTPALRQLSEYAKPHVM
GTGPESARPLSYGGMAHGMDHLLDYRMAAMYPPGSRERLELELERDKRERDARERELRER
EIREMEMREKLKADLELSKPGLDRILPHGPGIDSNWLELQRRFCQPGSHVLPSAANVGGP
GGGHHIPGVYPPTSLASDLLQRERERMERLGFPHHLMHPGADMAAYSNTVERLSAERLHA
ERMALATDPMVRLQMGNLGMSPSGHTHTHAHSHTHLHLHQQDAAAAAAAAAASGAPPFHP
SLHGLPHHFLPPLPPGADPLASGMSSSNPPTSSAGPHLQSLPQGLPHHAALLAGREQEML
QSDLYRRAYADPAFAHQLSAQAAHQEAIQRQLAMDRERFGPGGHLHH
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggacccaagaataattctcaaggaaactaatgatatggctagtccagctaagaaacgc
aaggggagagaatccaaatttataaagcaagaggatgaaccagaaaaagtacaggaggac
attgtagtggtgcccgttaggaaaggtcgtaaggggtcaaaatggcaggggtcagggttc
atcacaaaaagaggtgaccagatattatcgtatacctcggagaacaagatcacctacaga
aagggagattgtgtgtacttggagaattcccggcgggaccagccctacctagtctgtggg
atcaaagattttcgcctgaccaagcgagagacactggtggtgggcatcaagtggtacttc
cgtctgtctgaggtgcccgatagtgtctaccaactgttggttcaagatcgacacactgaa
agctgtggaagagagtcattgatacctaacccacacatccgctccagggagctcttcata
tcggatgcatccgacacctaccctgtcaaggcattgagagggaggtgtaaggtcagccga
taccacgatctcagcgctgctaaagatttcaaaccggagccagattctttcttttacgtc
ctagagtacaatccaaaaaccaagaggctggcgaccacgcaaggcgagattcgggtggga
cagagtcaccaggctcgcctacccgaattacggcgagatgtcttgccatcacagatgccc
gagaaaatggaatgctgggaggagcttcgatggaggcctaatgccgtcatggacggagac
ctgatgatgtacctgcgagctgcaaggagtgtggcagcattcgctgggatgtgtgatggt
ggctctacagaagatggctgtcaggcagcctcgatggacgagactaccatcaacgccatg
gacattttacatcgccacacctacgacaccggaaagggtctacaggcactcgtcaagtct
cctgctcttcgtagtatagagaagaaatggaccgaggaggactcgaaacgcttcatcaaa
gggctccgtcaatatggcaagaacttcttcaagatccgcaaggagctgcttcctcataaa
gaaacgggagaactggttgagtactactatttctggaagaaaactcctggcgccacttca
aatcggccatacagacgacacaagcgtccagcattcaaacgcaacacccgttcacaacgg
ccaacctcgagcgatttctgtgaccagagttgttcagcgagcgaatgttcggaggattct
gatgacagtggggctagtcgagagctgagtggctactcttgtcgacactgtagttctaca
gtgtccaaagactggcaccatgcaggtaaggacaaaggtctccgttgtacagaatgtcga
ctccacttcaaacgttacggggaagagcgccccctagacagtccacgcgactccacacga
gacccctcgtcccgggacccgtctccctttctcttccaacccgtcaaggaagaggactct
gtcaacggtcgacacaatatgcgaacgcggcaaactcgggaatcgacaaaaggcaaaaga
aaggaaagaaataatagtactagtagtccagatattatcgatagtccactgaacagttta
actccgttggctcgaggccgcaagtctcctagcactggcagtacctgtagtaacagtagc
acagacacacagagaaaggtcaagaagacagctgagacccagaacaagggcaagaagcga
caggcacactcggacacagaagacaaaaacaacaagaaaaagaaagctgaggaccgttcc
gactctgagtccgtatccgacagcagtagcctatccgggaacgatgaggagaatggtaat
gaaggggacatagagaataatcaggatgatctaagttcgtcctcacctcccagcactccg
cgctctgtagacacggactccagtaagcctgcggtgtcctctacaaccagcacctctgtt
cagtctcctgtgacaactgttgtcactcctacttctaccgccaccgtggccaaccttcac
gataaggtgccactcgtgcggccggagccagcacatatccaccaccctcatacatctccg
cctcctgtatcacaacttctaccaccacctcctcaccatctccactcacaccctctctcc
cctgtgtcgtcctgtcccccactcgttcccttatcatcttccatttctctaccgtcatca
cagaaactaccatcagagaagctgttgcccacgacgacaccctccatgccactttcgctc
cagtgcagcacacctcaggacttggccttccatcgagatacgtcgccgttcacatcgccg
tcattgtcatcactacacagtagaacaccactatcgttacctcaagtgagcacttccagt
accttgtcctccacatctgcccgacttgatgacattcagacaaatacagtttcaattaaa
aaggagcctgtgtctccaccaccgtctcccaaacacaactttggggcctccaagctgact
gttgatactccagcctctcggcaaagtgaggagaaaaccaccatgaacagtgttattgtt
aagtcggaacccttgtccagtttctcaagtcgtgctgactcatttcaaccttttgatttc
tctaaaccaggaccggaggctagtgctagcagtactgtggtaccgaccagtcgtgtgtta
gatagtgtgagtagtagaacagacaataaaacccctcccctccatatatctcacccccat
ggacccccacatccctctcatggacttcctcacagctcacaggcccatggacctcctccc
ctaggaataaatccacatggaccttcccaacatgggcccccaccccctcatggaccttct
ctgcatgggccacccccaccacatgggcttcctcttcatggaccttccccccatggacca
ccatcatcattgtcatcatcatcactcggaccatccctacatggacctttatcacatggt
ccatctcccctcaggcccatcccacatggggcttcaccccacgggtctcatccacacatt
catgaaccgcccaccactcctaaggaactgatctctccctcatcaacgctggacgccagt
tcgacagggaaactgaccccaggggtcaagtctgagccgaattctggcccggttggtgag
acaagtgttgtgatggaagaagaggaagaatctgaccacgaaggggggacaactacacca
ggacccgacccaacccgatgtagcctagaaatgtataaatctgaaaatgcaatactaatg
aaagtgctaaacaggggagataacaactgttgttcccgatgtgatatcgtcttcagaccg
caccctgattccaaactggcccgtaagagggcagcaccgagccacccgcctgttaaaaca
gaagagaaggttgttagtgctaagaaacctgagactcctccacccaactcgacagcagac
gctcaaatcaccagcagtataaccccaaataatccatacgagcgacacacaccacgctcc
aactaccctgacacgccagcattacgccaactcagcgaatatgcaaaaccacacgttatg
ggcacaggccccgaatctgcacgaccactgtcctacggaggtatggcccatggtatggac
caccttctagactacagaatggcagcaatgtatcctcctggctctcgcgaaaggttagaa
ttggaactggagcgagacaagagagaaagggatgccagggagagggaactccgagaaagg
gaaatacgggaaatggaaatgagagaaaaattaaaggcagatttggagctcagtaagcca
ggattggacaggatattaccacatggtccgggaattgattctaattggctggaactacag
cgccgcttctgtcagcctggcagtcacgtgttaccgtcggcagctaatgtcgggggtcca
ggagggggacaccacatccctggggtttaccccccgactagtctggctagtgatctgtta
cagagagagagggaaaggatggagcgtctaggctttcctcaccatctaatgcaccccggt
gcagacatggctgcctactctaacacagtggagagactatcggccgagaggctacatgcc
gaacgtatggctctcgctacagacccgatggttcgacttcagatgggaaacctgggcatg
tcaccgtcaggccacacgcacacacacgcacattcccacacccatcttcacctccatcaa
caggatgccgcggcggccgcagcagcagcagcagcatcgggggctcctcccttccatccg
tcactgcacggcctgcctcaccattttcttcctcccctacccccaggagctgatccttta
gcctctggcatgagcagctctaatcctccgacctcgagtgcaggaccacaccttcagtcc
ctgccccaggggctgccccaccatgcagctttgttggccggccgtgaacaagagatgctc
cagagtgacctttatagacgagcctacgctgatccagcattcgctcaccagctgtctgcc
caggctgctcaccaggaggcgatacaacgccagctggctatggatcgtgaacgctttggt
cctggaggtcatctccatcattga
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integrated database retrieval system
