Argopecten irradians (bay scallop): 138315434
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Entry
138315434 CDS
T10542
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138315434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138315434
Transcription factors [BR:
airr03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
138315434
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
138315434
NCBI-ProteinID:
XP_069112559
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Position
2:complement(39104136..39138348)
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AA seq
1110 aa
AA seq
DB search
MGLSEDGEEAVERRFEEICLDLNMDKHPREESWNNYRKIRENYTLEGDQLHWLACALYEA
CRRSVVPTVGKGTIEGNCVSLTRLLRSAGRFSLIQFFNKMKKWADMANLPQEFRDKVNRL
ERNFAVSTVIFKKFEPIFLDIFRNPLDEPPKQNRSRKQRRLPCSSTDVFNFCWTMFVQVK
GNFPAISDDLVNSYHLLLACIDWFYANALLGGRKDLLNPEFAGLPESYHSKDWKPPTEPP
CIIRLLCEKHEGLELEAKVIKEHWWKPHIRKLFDKRVLKGKPETLSAILEIGNFEANSIA
INKSYEEFPLRYSSKTINNQYEEYVLSVGDFDERIFLGDDADEEIGTPARASEEVSGEFS
ERMNVKNNLQQHFDETRSLAPLTPLTGRRYLKEKDHSITPVSTATQSVGRLQHLLSGRKT
GPSEELLQLFQECKKDPNDSIIPRLKEMGDVFCNHYVQPTDDHPGAHIDFAKRRLQLGES
LYFKTLESIITSERKRRKKGSKESLAPITALLEQDMFHRSLIACCLEIVIFSYNSQRMFP
WIVEIFELSAYHFYKVVEIIIRAEEGLSRDMVKHLNHIEESILECHAWKNESPLWDTIKD
QNSEVPACEDVVLPSQLESVQVNPPMLHPAVKRLVDEGRSSGQQQPQQSTTTLKDSLPSP
PGATTMASDRFISSPSPGSAKRRLFITKHNPAGATVTTISSKTETPGSATNTASTTTSTS
NSPAVPTQIIAFQQAQTEDGRQVLIPVHTLLPQKASNTITTPKTTTTTATPATTAVQTNN
SVSTQTPTNKPRKTGSLALFFRKMYHLASVRLRDLCDRLQVDDDDLRQKMWTCFEHTLVH
HTDLMMDRHIDQMIMCAIYVMAKVTDHPQSFQNIMKCYRLQPQAQSHVYRSVLISGRRRR
TSGSSDSSKNGTSGSSSPVPEIKEEVTTKKKGEIRSSSTLPVPHPSSHPPTPTRLLATGP
GFDLGEERGDLIMFYNMVYVGSMKKFAMKFSSQSQSEDCPPLSPLPMSKVHPSSPRRLPG
NHCVYISPHKLTSNLPSERMLYCFQKSPAKDLRAINRMLKMKEKNTTSFLGKRMLNVDND
GPSPAKQIYQGISLMRRLQNLNSDRQENAQ
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgtcggaggacggagaagaagccgtggagcggcgatttgaagaaatatgttta
gatttgaacatggataaacatccacgtgaagaatcatggaataactacagaaaaatacgt
gaaaactacacgttagaaggcgaccagttacactggctggcatgtgccctgtacgaggcc
tgcaggcgaagcgtcgtacctactgtggggaagggaacgatagagggcaactgtgtgtcc
ctaaccagactgctccgctccgctggaagattcagtttaatccagtttttcaacaaaatg
aagaagtgggccgacatggcaaaccttcctcaagaattcagagacaaagtaaacagattg
gaaagaaactttgctgtttctacagtgatcttcaagaaatttgaacctattttcctggat
atcttcaggaatcccttagatgaacctccaaaacagaacaggagtaggaagcagaggagg
ctgccttgttcctcaaccgatgtgttcaacttctgttggacgatgtttgtgcaagtcaaa
ggaaacttccctgctataagtgatgatctggtcaactcctaccatctgctgctggcctgt
atagactggttctatgctaatgctcttcttggaggcagaaaagacctactgaatccagaa
tttgctggtttaccagagagctaccattccaaagattggaaacctcccacagaaccgccc
tgtatcatcagacttctgtgtgagaaacatgagggcttggaactggaagctaaggttata
aaggaacactggtggaaaccacacatccgtaaactattcgataagagggtattaaaggga
aaaccagaaacattatcagcaatattggaaattggaaactttgaagccaacagtattgct
atcaacaaaagttatgaggagtttcccttacgctatagcagtaaaactataaacaatcaa
tatgaggagtatgtattgagtgttggagattttgatgaacggatattccttggagacgat
gcagacgaagagataggaacacctgccagagcttcggaggaggtgtcgggagagttttca
gagagaatgaatgtaaaaaataatctacaacaacattttgacgaaactagaagcttggct
ccccttactcccctcactggcaggcgatacctgaaggaaaaggaccacagtattacacca
gtctccaccgccactcagagtgtcggtcgactacaacatctcctgtcaggacgcaagact
ggacccagtgaggaactgctacagctctttcaagaatgtaaaaaggatcccaacgattcc
ataatacctcgattaaaggagatgggagatgtgttctgcaatcattatgtgcagcccact
gatgaccatcccggtgcccacattgactttgccaagcgccgtctacagcttggagagagc
ctgtattttaaaaccttagaaagcattataacctcggagagaaagcgcaggaaaaaaggc
agcaaagaaagcttggcaccaattactgcgttgttagaacaggatatgtttcaccggtca
ctgatcgcttgctgcttagaaattgtcatcttctcatacaactctcagaggatgtttccc
tggatagtggagatctttgagctgagtgcctaccacttctacaaggttgtagagattatc
ataagggctgaggaaggactatcccgggacatggtcaaacatctcaatcatattgaagaa
agtattttagagtgtcacgcctggaagaatgaatcgcctctgtgggacaccataaaagac
caaaatagcgaagtaccagcttgtgaagatgtcgttttaccgagtcagctagaatctgta
caagtgaatcctccaatgcttcatccagctgttaaaagactagtggatgaaggacgtagc
agtggacaacaacagccacagcaatctacaactactcttaaagattctctgccatcgccc
cctggagctacgacgatggccagtgatcgctttattagctcgccctccccaggaagtgcc
aagagacgtctgtttatcaccaagcataatcctgctggtgccaccgtaaccactatatcc
agcaagacagagacaccagggtcagcaaccaataccgcttcaacaaccaccagtacttca
aactctccagctgtcccaacacagataatagcattccaacaggcacagacggaggatggc
cgacaggtgttgataccagtacatacccttttgccccagaaagcctcaaacacgataacc
acgcctaaaaccacaaccactacagctactcctgctactacagccgtgcaaaccaataat
tctgtctccacacagacgccaacaaacaaaccaaggaaaacaggctctcttgcactgttc
tttaggaagatgtatcacttagccagtgtaagactgagggatctatgtgaccgattacaa
gtggatgatgatgacctacgacagaagatgtggacgtgtttcgagcatacacttgtccat
cacacggatctgatgatggaccgtcacatcgaccagatgattatgtgtgcaatatatgtg
atggccaaggtgaccgatcacccacagtctttccagaatatcatgaagtgctatagactt
cagcctcaagcacagagtcacgtatacagaagtgtgctaatcagcgggcgacgtagacgg
acgtctggtagcagtgacagcagtaaaaatggaaccagtggttcctcttctccagttcct
gaaataaaggaggaagtgactacaaaaaaaaaaggagaaatccgatcgtccagtacacta
cctgtgcctcaccctagtagtcaccctcccacccccacacgtctactcgccacagggcca
ggctttgatttaggcgaggagcgaggcgacctcatcatgttctacaacatggtctatgta
ggaagtatgaagaaatttgccatgaaattttcttcacaaagtcaatcagaggattgccca
cctctgtcaccactgccaatgtccaaagtacacccttcatcccctcggcgattgcctggt
aaccattgtgtttatatatcgccccacaaactcaccagtaaccttcccagcgaacggatg
ttgtactgctttcagaagagtccggcaaaggacttacgtgcaataaacagaatgctcaag
atgaaggagaagaacactacatctttccttggtaaaaggatgcttaatgttgataatgat
ggacctagtcctgctaaacaaatctatcagggtatctcattgatgcgacgtcttcagaac
cttaacagtgaccgacaggagaacgctcagtga
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