Argopecten irradians (bay scallop): 138315459
Help
Entry
138315459 CDS
T10542
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
airr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
138315459
Spliceosome [BR:
airr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138315459
Complex C
U4/U6.U5 tri-SnRNP related factors
138315459
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
138315459
Chaperones and folding catalysts [BR:
airr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
138315459
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
U-box type E3
138315459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
zf-Nse
Wound_ind
Motif
Other DBs
NCBI-GeneID:
138315459
NCBI-ProteinID:
XP_069112600
LinkDB
All DBs
Position
2:complement(40157952..40188275)
Genome browser
AA seq
520 aa
AA seq
DB search
MGKKQHQKDKLYLTTTEWKTSYGGYKGDKSSGENSRFRRLPFSCCSLSMQPFENPLCTKE
GVIFDLMNIVPFLKRYGISPVTGEKMTAKQLIKLNFAKNSEGKYHCPVTFKIFNENTHIS
AIKTSGNVFAHEAIERLNIKPKFYRDLLTDEEFTRADIVTIQDPTNLDKFNISTFYHLKH
NLKVGDEDEEAAKKNPRYHLKALNAETAEALDELERQYKPKEKAAEAKPVADSLNAAHYS
TGRVAASFTSTAMAPATSHEAAIIDEDLLRYERVKKKGYLKILTNLGELNIELYCNQVPK
TCHNFLKLCASGYYTGTVFHRSIRNFIIQGGDPEGTGMGGQSIWGKPFADELKPNLKHTG
RGVLSMANSGPNTNKSQFFFTFRSANHLDGKHAVFGKIVGGLDTLDKMEKVETDKKDRPK
EEIKIEDCIIYVNPYEEADEMLQQERDNAKQKDTEEQEAQRKKDLRRKPVGTDQPKAFKS
GVGKYINPTTLKRPMDSLEPVGNVKKNKVTGVQFGDFSSW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacaacatcagaaagacaaactttaccttacaacaacagaatggaagaca
tcatatggtggttacaagggagacaaatcttcaggagaaaattcgcgattcaggcgtctt
cctttctcgtgctgcagcctgtcaatgcagccattcgaaaatccactatgtaccaaagaa
ggggtaatatttgatctgatgaatattgttcccttcctgaagaggtatggaattagccct
gttactggggagaaaatgactgctaaacagttgattaaattaaatttcgcgaaaaattct
gaaggaaaatatcattgtccagtgacctttaaaatcttcaatgaaaacacacatatatca
gccataaagactagtggtaatgtgtttgctcatgaggcgatagaaaggctgaacattaag
cccaagttctacagagacttgctgacagatgaagagttcactagagcagacatcgttact
atacaggatcccacaaatctggataaattcaacatcagcacattttaccacctcaaacat
aacctcaaagttggcgatgaagacgaggaggcagccaaaaaaaacccacgttaccatctg
aaggccttaaatgcagagacagcagaggcgttggatgaactagaaagacagtataaacca
aaggagaaagctgcagaagccaaacctgtggcagattcattgaatgctgcccactactcc
acgggaagagtagcagcatccttcacctctactgccatggcaccagccacatcacacgag
gcagccatcattgatgaagacctgctacggtatgagagagttaaaaagaaaggttatcta
aagatcctcaccaatttaggagaactcaacattgaactttactgtaaccaggtaccaaaa
acatgtcataattttctgaagctgtgtgctagcggatattacaccggcacggttttccat
cggtcaatacgcaactttattatacagggaggagaccccgagggtacaggaatgggtgga
cagtctatatgggggaagccatttgctgatgagttaaaaccaaacttaaagcataccggc
agaggggtactgagtatggcaaacagtgggccaaacacaaacaagtcacaatttttcttc
acatttagatctgccaatcatttagatggtaaacatgccgtgtttggcaagattgttggt
ggactagacacattagataaaatggaaaaagttgaaacagataaaaaagatcgaccaaag
gaggaaataaagatagaagattgtattatatatgtcaacccttatgaagaagccgatgaa
atgcttcaacaagaacgtgacaatgctaaacagaaggacactgaagaacaagaggctcaa
aggaagaaggacctccgcagaaaacctgtagggacagaccaaccaaaagccttcaagtct
ggggttggcaaatacataaaccccactacactaaaaaggccaatggactcgctggaacct
gtgggtaatgtgaagaaaaacaaagtgaccggagtccagtttggagatttcagttcctgg
tga
DBGET
integrated database retrieval system
