Argopecten irradians (bay scallop): 138315692
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Entry
138315692 CDS
T10542
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138315692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138315692
03036 Chromosome and associated proteins [BR:
airr03036
]
138315692
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138315692
Coactivators
SAGA/TFTC/STAGA complex
138315692
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138315692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
138315692
NCBI-ProteinID:
XP_069113010
LinkDB
All DBs
Position
2:46572563..46590405
Genome browser
AA seq
1024 aa
AA seq
DB search
MATANFIDDLITSEIDESAVSALVGALEGQLASPTHKDNSQSISESSINNNHITTASTPV
ACTASSFNIVQTTNVTQGLKGLSLPNSVTVNSVTSPLVKLTQSDPQIIGINSIINSNNVA
ASNNNTQNNRESPVPNSSRVVNNQHAVRIVPNSQPLVNSRSSPLPQAVVNSNSLVTTNHV
QSANSPQIDLNRTTHSPNVNARIVISKPGETVVDQKSVIIPHVTSSAGGITIPQQFSSQQ
DVVLKPGQIILKHDQANAGNINALKQERITTIKQEGSMSSQQHNQFLIKNEQQTTRSPIS
NVKHEGTPTIQTIQTVHGAQHIQTGSAPTVAGSQITQATNVHIVNAPIKGGVAGNPSVIT
VRTPGQSQSGQVVMRQQTPQSSGVPMHVVSVSGSNVVPRFTNSKGAVARVATTASPVRQQ
QINIAPRPGTTAGTITLPTGMLPPGGMLVKNEQGQFVIVTANQGGVQQAVSTTMVSSTTG
HRIQYVRPPTTVQTHARPPTTHSQIVTIQHPSGTSIAGQPQTVLRQTIPSSGAPALVTTA
SSQVVQTVVRTTTPTMAPNTSTGPGTNQSSGQGHQQPLDNVKKCKNFLSTLLKLASGQPK
ETVKNVRELIQGLIDGKVEPEAFTERLQAELKSSPQPYLVPFLKKSLPLLRKSLIQNKMS
IEGVRAPPLSVLQQNVIIPTAATSMGQIPNQIPHLLNTAKSQQGMIQVQQIQKSVAHHRG
SIPKTVTVAGRGPGAHHGVQGIPTVSTVPGQTKSHGSTAGHREKPKYDSLKDDDDINDVA
TMGGVNLSEETKNILATNADFIGTQIRSCKDEAFLHHSTLQSRISAIAKKHGVDEVSSDV
INLVSHAAQERMRDVLEKLATIAEHRIEIYKMNDRFEVTKDVKSQLKFIEELDKLEKKRH
EEQEWEKIMKAAKSRSKHEDPEQQKIKQKAKELQQAEIERMRQEEANLTALAAIGPRKKR
KTDFGESSQGSSGGLNLSNGLGSSSSRSTSRPRIKRVTLRDVLFFMEQERSLCKSKVLYK
TFLK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccaattttatcgacgacttgattacctctgagattgatgaaagtgccgtt
agtgccttagttggtgcattagaaggacagttggcttcccctacacacaaggataactca
cagtcgatatcagaatcttctataaataataatcatatcactacagcaagcactccggta
gcttgcactgcatcatctttcaacattgtacagaccaccaatgtaacacagggactaaaa
ggtttgtctttaccaaatagtgtgactgtgaactctgtcacgagtccattggtgaaactg
acccaatcagacccccagatcattggcattaattctataataaactcaaacaatgttgca
gcatccaataacaatactcaaaataatagggaatcccctgttccaaactcgagcagagtt
gtaaacaaccagcatgctgtaagaatagtgccgaactctcaaccactggtgaattcaaga
agttccccattgccacaagcagttgtcaattccaatagtttagttactacaaaccacgtt
cagagtgcaaattcaccacaaatagatctaaataggactacccattctcccaatgtgaat
gcaagaattgttatttcaaaaccaggtgaaacagtagttgatcagaaatctgtgataata
ccgcatgttacatcaagtgctggagggatcacgattccacaacaattttctagtcagcag
gatgtagtgttaaaaccaggacaaattattttgaaacatgaccaagctaatgctgggaat
ataaatgctctaaaacaagaacgtataacaactatcaaacaagaaggctctatgagctcg
caacagcataaccagtttttaataaaaaacgaacaacaaacgacgagaagtccaatttca
aatgtgaaacatgaaggcacaccaacaattcagactatacagacagttcatggagcacaa
catatacaaacgggatctgcacctactgtggctgggagtcaaataacacaggcaactaat
gttcatatagtaaatgcaccaattaaaggtggtgtagcagggaacccaagtgttattaca
gttagaactcctggacaatcacagtctggtcaagtagtgatgcgtcaacaaacgccacaa
tcaagtggcgtgcctatgcacgtggttagtgtcagtggttcaaatgtggtgccaagattc
acgaacagtaagggagcagtagcacgggtcgcaacaacagcttctcctgtacggcagcag
caaatcaacattgcaccccgaccaggaacgacagcgggaactattaccctgcctacgggg
atgctgccgcctggtgggatgttggtgaagaatgaacaaggccagtttgtcattgtcacc
gcaaaccagggaggtgtacagcaggctgtgtccacgacaatggtcagttctacaacaggg
catcgcatacagtatgtcaggcccccgaccacagtccagacacatgcacggcctcccacc
acccacagccaaatagtcaccatccaacatccatctggtacctcaatagcaggccaacct
cagacagtacttcgtcagaccatcccgtcctctggagcccctgcactcgtgactacagcc
tcaagtcaggttgtgcaaactgttgtccggactaccaccccgacaatggcaccaaacacc
tcaacaggccctggtacaaaccaaagttctggtcaaggccatcaacagcctttagataat
gtgaaaaaatgtaaaaacttcctctcaacactgctgaagctggcatccggacagcccaaa
gaaaccgtaaagaatgtccgagagctcatccagggtcttattgatggaaaagtagagcct
gaggctttcacggaaagactacaggcagaacttaaatcatcaccgcagccatacctagtc
cccttcttaaagaaaagtctgcctctgttgcggaagtcgctaatacagaacaagatgtct
atagaaggagtaagggcacctccattgtctgtcctgcagcaaaatgtgataattcctaca
gcagcaacatcgatgggacaaataccaaaccagatccctcatcttttgaatacagccaaa
agtcaacaagggatgatacaggtgcagcagatacaaaaaagtgtagctcaccataggggc
agcataccaaagacggtgaccgtggcagggcgtggcccaggggctcaccacggggtacag
ggcattcctacagtcagtacagtaccaggacaaacaaaatcacatggcagcacagcgggc
caccgcgaaaaacccaaatatgactccctcaaagatgatgatgacatcaatgatgtggca
actatgggtggtgtgaacctatcagaagaaaccaaaaatatcctggccacaaatgcagac
ttcattggaacacagatacgatcttgtaaagatgaagcgtttctccaccattcaacctta
caaagtcggatcagtgctatagccaagaaacatggtgtagatgaagtgtcctcagacgtc
atcaatctagtatctcacgctgctcaggaacggatgcgagatgttttagaaaagttagca
acaatagcagaacatagaatagaaatttataaaatgaatgataggtttgaagtcacaaag
gatgttaagtctcagttaaaatttatagaagaactagacaaattagaaaagaaacgacac
gaggaacaggagtgggaaaaaataatgaaggcagccaagagccgatcaaaacatgaagac
ccagaacagcaaaaaattaaacaaaaggccaaagagttacaacaagctgagatagagcga
atgaggcaagaggaggcaaacttaacagcattagcagcaataggacctcggaagaaacgc
aaaacggatttcggggagtccagtcagggaagctcaggagggttgaatctgtccaatggt
ttgggatcatcatcatcaagatctacatctcgaccacggattaaaagggttactttaaga
gatgtcctcttctttatggaacaagaacgatctttgtgcaagtcaaaggttctctataag
acattcctaaaatga
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