Argopecten irradians (bay scallop): 138315851
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Entry
138315851 CDS
T10542
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138315851
03036 Chromosome and associated proteins [BR:
airr03036
]
138315851
Transcription factors [BR:
airr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138315851
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138315851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
GAGA
Zn_ribbon_PriA
zf-C2HE
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-met
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
138315851
NCBI-ProteinID:
XP_069113253
LinkDB
All DBs
Position
2:complement(51436557..51449220)
Genome browser
AA seq
973 aa
AA seq
DB search
MDPGSENPTEGPGVPVNLNDLQHYLVTFNKEIEQNDDPDQFTVGADGSGVVVGEPLSGGQ
GEPAFIAVPAEKVEPIDPSDVENVVNVVDLKLPYGTAMDIGEAVQQLSQVETTPEVRDQT
QSITNGQPEEVSVGLEDPGIDQAVNNCMAEVQAHMAEIAAQGQVTKLTNVEELSKAVNNK
ECFMKQLEIPVSNSGDGDQKIVHVVSIDGQEHMQLVDAAAAGLTTGLTTGLSTSTGQLIQ
IPTVSTTLTDSIEQELADTVGNGSDPVAVLASVAANTSTLNQLQTITVGQTELNSAQLVA
LQNSSDSTQPQLVAVQAREGSMEIMGAEGENNPNSIVLNTGDNNFQTVTIVPSEVNPSGE
MSYVLIVSQPDKEDSIGSPKQLNLDMSTMLDMKEESQEMVEEIVQEDGSTRRVITIVPKR
MSMPAVTHQAQLMCHYCDYTSPKRYLLMRHMKTHSEDRPHKCNICDRGFKTMASLQNHVN
THTGIRPHKCKECEAAFTTSGELVRHIRYKHTFEKPHKCTECDYASVELSKMKRHMRSHT
GERPYHCPHCNYASPDTYKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAHKLIHSGNKP
VFQCHLCPTTCGRKTDLKIHMSKLHSSAKPLCCKKCGSTFPDRYTYKLHMKSHEGEKCFK
CEQCDYAAQSIRHLESHILTHTGEKPFECKECGQTFRQKQLLRRHINLYHSPEYSPAEAR
DKMYECDECDKTFAHKGNLIRHMQQHDPDSVQYKDLAGQGRSRDSLSSPLTAEQLLQGSL
LTEMREGKLGNTPKIVIVHPDGRVEEVTSKLQTLAHEKDAEDVLMAMTDDRDQVEHGHPD
SILQVSGGGSLDNQTIRIALANSTIPNPDAESVLQELQQQTDDERKDVETQVALETDSEH
EEEVEQIFQQSGASAEDGNVDMLQIDLQSAVPDQEEAGNVVINLQPAMDTRSKKQKESDE
ENSSPTKKIKISS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggaagtgaaaatccgacagagggtccaggcgttccagtgaatctcaatgat
cttcagcactatttggtgacatttaacaaagaaattgaacagaatgatgatcctgatcag
tttacagttggagcagatggcagtggtgtggtggtaggtgagccgttatcaggtggacag
ggagagccagcatttattgccgttccagcagaaaaagttgagcccatcgatccgtcagat
gtggaaaatgttgtcaatgttgttgatctaaaactgccatatggaactgccatggatatt
ggtgaagctgttcagcaattgagtcaagtggagacaactcctgaggtcagagaccagacc
cagtcaatcacaaacgggcaaccagaggaggtatctgttggcttggaggaccctgggata
gatcaagcagtgaacaactgtatggcagaggttcaagcacacatggcagagatagcagct
cagggacaagtcacaaaacttacaaatgttgaagaactctcaaaggcagtcaacaacaaa
gaatgctttatgaaacaattggagattcctgttagtaattcaggagatggcgatcagaag
atagtccatgttgtgtctattgatggtcaggaacacatgcagcttgtggatgcagcagct
gctggactgaccactggtctgaccacaggactcagcacaagcactggtcagcttatacag
attcccactgtctcaacgacgttgacagatagcattgaacaggaactagctgatactgta
gggaatggttcagatcctgttgctgttctggcatctgttgcagccaatacatctacactc
aaccaattacagactataacggttggtcagacagagttgaattcagcacagctggtagcc
ttacagaactcatcagacagcactcagccacaactagtcgccgttcaggccagggagggg
tccatggagatcatgggtgcagaaggagaaaataatcccaactcaattgttttgaacaca
ggagacaataatttccagacagtcactatagtaccgtcggaggtgaaccccagcggtgaa
atgagttatgtcctgattgtgtcccagcctgataaggaggacagtataggctcccctaaa
caattgaacctggacatgagcactatgctggacatgaaagaagaatctcaagaaatggtt
gaagaaatcgtccaggaagatggtagtactcgtagggtcataacaattgtaccaaaacgt
atgtcgatgccagctgtgactcaccaagcacagctgatgtgtcattattgtgattataca
agtccgaaacggtacctgttgatgcgccacatgaaaacccactcagaggatcggccacat
aagtgtaacatttgtgatcgtggattcaaaacaatggcatcattacagaatcatgtgaac
acacacacgggcataaggccgcataaatgtaaggaatgcgaagcagcattcaccacatca
ggggaacttgttagacatattcgctataagcatacatttgagaagcctcacaagtgcact
gaatgtgattacgccagtgttgagttaagtaaaatgaagagacacatgcgatcacacact
ggtgagcgcccttaccactgtccgcactgtaactatgcgagtccagatacatacaaattg
aagcgacacctacggatacatacaggagagaaaccatatgaatgcgatgtgtgccatgca
cgattcacacagagcaacagccttaaagctcataaacttattcactctggtaacaagcca
gtgtttcaatgccacctctgcccaacgacatgtggtcggaaaacagatttgaagatccat
atgtcaaagctacacagtagtgccaaaccattgtgctgtaagaaatgtgggagtaccttt
cccgatcgatacacctacaagttacatatgaaaagtcatgaaggggaaaagtgcttcaag
tgtgagcaatgtgactatgctgctcagtcaatccgccaccttgagagtcacatactcaca
cacactggtgagaagccatttgaatgcaaggagtgcggtcagacatttcgtcagaaacag
ctactgcgtcgtcacatcaacctctaccattcaccagagtacagtccagcggaggcacga
gacaaaatgtacgagtgtgacgaatgtgacaagacgtttgctcataagggcaatctgatt
cgtcacatgcaacagcatgatcctgacagcgtccagtacaaggacttagctggccagggg
aggtcacgtgatagcctgtcatccccattaacggccgagcagctactacagggcagtctg
ctgacagagatgagagaagggaagctaggtaacactccaaaaattgtcatagttcatcca
gatggaagagtggaggaagtgacgtcaaagctgcaaactcttgctcacgagaaagatgca
gaagatgtcctcatggcaatgactgatgaccgagatcaggtggaacatggtcaccctgac
tccatactacaggtcagtggtggtggcagccttgacaatcagacgataaggatagctcta
gccaactctaccatacctaacccagatgcagaatcagtactacaggagctacaacaacag
acagatgatgagaggaaagacgttgaaacacaagttgccttggaaacagacagtgaacat
gaagaagaagtggagcaaatatttcaacaaagtggtgcaagtgctgaagatggaaatgtt
gacatgctacagattgatctacaatcagctgtaccggatcaggaagaagcgggaaacgtt
gtcatcaaccttcagccagctatggacacaaggtcaaagaagcaaaaggaaagtgatgaa
gagaattctagtcccacaaagaaaataaagatcagctcatga
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