Argopecten irradians (bay scallop): 138315879
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Entry
138315879 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138315879
04121 Ubiquitin system [BR:
airr04121
]
138315879
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138315879
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138315879
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138315879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
ANCHR-like_BBOX
zf-C3HC4_4
DUF5711
Mala_s_1-like
RING_XB3-XBAT31
Vgb_lyase
zf-RING_2
WASH_WAHD
Agenet
TFIIA
Vac17
Motif
Other DBs
NCBI-GeneID:
138315879
NCBI-ProteinID:
XP_069113293
LinkDB
All DBs
Position
2:52055739..52069602
Genome browser
AA seq
807 aa
AA seq
DB search
MAAYADSIGEQLGCPLCHNRFDDPRILPCLHSFCKRCLEQATRDQGPSPSQPGQEFSGPL
ECPTCHQVVPLNSGGIDSLPSNLIVSNIFDVMVSSQHDIEDSSLDLERQRPITGTKWCNS
CDEGSKATCVCKNCSEYLCDNCVRAHQRVRLTKDHFIERFSMLNLQSSSILNLGTTCQPR
LSSPSMQQQQQQHQQEYQQQKHQQQAVAHPDHQDSYCTRHEHGILRLYCDTCSRAICGDC
TMNEHVGHNFIYLQDAIDNSKTITLKLLADAKAGIKALEESIELTQGMAERVEVRTQAVT
TEVRTIIRRHMAALEERERDLLRRVEKIRQVKGKSLHIQVDDLKQGLSSLMQTVNEVEKL
LNTGTQIDILKTKDQMVAEMQNVRKLRGHLQPHEDDCIMFTPPDLALYNAIGKMGIISSS
AYAPNCIATGDGLKKALKGKVSLFMIHTKDHHGEPRVIGGDPVECIIHSSDGAFYRAEVI
DRQNGTYAVTYRPQLEGQHIISVTIHGKHIAESPFTVNIRSGRNYATIGPMLFEFGGEGE
VEGKLCRPWGVCCDRDGNVVIADRSNNRIQVFNSDGTFCHRFGTSGTRNGQFDRPAGVAC
DNQGRIIVADKDNHRVQIFTIDGTFLLKFGEKGNKNGQFNYPWDVAVNSEGKILVSDTRN
HRVQLFSPDGQFVNKYGFEGSLWKHFDSPRGVCFNNEGHMVVTDFNNHRLLVIHPDFQTA
RFLGTEGSANGQFLRPQGVVVDQEGNIIVADSRNHRIQVFQPNGNFLCKFGTPGSGPGQL
DRPSGLCVSPEGYIIVVDFGNNRLQVF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatatgccgactcgattggggagcagttgggatgccctctctgccacaaccga
tttgacgaccctcgaattttgccatgtctccattccttttgcaagcgatgccttgaacag
gccacacgggaccagggtccctccccgtctcaaccaggacaggagttttcgggaccccta
gaatgtccgacatgtcaccaagtcgtccccctaaactcgggcgggatcgacagcttgcct
tccaacttaatcgtgtcaaacatttttgacgtgatggtatcatcacaacatgatatagaa
gactcatctctagatttggaacgacaacgacccataacaggtacaaagtggtgtaactcg
tgtgacgagggtagcaaagcaacttgcgtttgtaagaactgtagcgagtacctgtgtgat
aactgtgtacgagcacatcaaagagttaggctcactaaagatcacttcattgaacgtttt
tcgatgttaaatctacaatcaagcagcattttaaacctcggtacaacatgccagcctcga
ctaagctcaccatccatgcaacaacagcagcagcagcatcaacaggaatatcaacaacaa
aaacatcagcaacaagcggttgctcatcccgatcaccaggatagttactgtacgcgacat
gagcacggaattctgcgtctttactgtgatacctgttcgagggcaatatgtggtgactgc
accatgaatgaacatgttggacataatttcatatatcttcaagatgcaattgataattcc
aaaacaataacattgaaacttctcgcagatgccaaagcagggatcaaagctcttgaagaa
agtattgagctcactcagggaatggctgagcgtgtggaagttagaactcaggcagttacg
acggaagtgagaactatcattcgcagacacatggcagcgttagaggaaagggagcgcgat
ttactacgacgcgtggaaaaaattcgccaggtcaaaggaaaatcactacatatacaagtt
gatgatcttaaacaaggactttcttcacttatgcaaacagtcaacgaagttgaaaaactt
ctaaatacgggtacacagattgatatactcaaaaccaaagaccaaatggttgcagaaatg
caaaatgttcgaaaattacgtggtcatttacagccacacgaagatgactgtataatgttt
acacctccagatttggcactttacaacgctatagggaaaatggggatcatcagtagtagt
gcatatgcaccaaactgcattgcgactggtgacggactaaaaaaggctttgaaaggaaaa
gtatcacttttcatgattcatactaaagatcatcacggtgagcctcgcgtaattggcggg
gatccagtggaatgcatcattcatagttcagacggtgctttctatcgcgcagaggtcata
gatcgacaaaatggcacatatgcagtcacatatcgtccacaacttgaaggacagcatatc
atatcagtgacaatacatggcaaacatatagcagagagtcctttcacggtcaatatacgc
agtggacggaactacgcaacaatcggaccgatgctgttcgagttcggaggcgagggagag
gtagagggaaagctgtgtcgaccttggggtgtttgttgtgatcgtgatggaaatgttgtt
atcgcagaccgaagtaacaatcgtatccaggtcttcaactctgacggcacattttgtcac
aggttcggaacttcaggtacgcgaaatggacaatttgatcgccccgcaggcgttgcatgt
gataatcaagggcgaataatcgtggcagacaaagacaaccatagagtacagattttcact
atagatggaacatttctgttgaagtttggtgaaaaggggaataaaaatggccagttcaat
tacccttgggatgtagctgtcaatagtgaaggtaagatcctggtgtccgacactaggaat
catcgagttcaactgttttctcctgacggacagtttgtgaacaaatacgggtttgaagga
tctctttggaagcactttgattcaccacgtggtgtgtgtttcaacaacgagggtcacatg
gtggttaccgatttcaacaaccaccgacttctggtaatacacccagactttcaaactgct
aggtttctaggaactgagggcagtgcaaatggtcagtttctgcgaccacaaggtgtggtg
gtggaccaggaagggaacattatcgtggctgattctaggaaccatcgtattcaggtgttc
caaccaaatggcaatttcctatgtaaatttggaacccctggatcaggccccgggcagctc
gatcgtccttctggtctatgtgtctctccagaaggctacattattgtggtcgactttgga
aacaatcgcttacaggtattttaa
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