Argopecten irradians (bay scallop): 138316076
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Entry
138316076 CDS
T10542
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138316076
Spliceosome [BR:
airr03041
]
Common components
Common spliceosomal components
General mRNP proteins
138316076
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RBD_DEAH11
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
138316076
NCBI-ProteinID:
XP_069113662
LinkDB
All DBs
Position
2:58861727..58884328
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AA seq
545 aa
AA seq
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MADDFDVEAMLEAPYKKEDDGRGDASSEREKRKHRDRSRDRDREKRHGHRDKDRKDRDRD
RDRDRKDRDRKRSRSRDRERKERKRSRSRDRDRRKEKRRSRSRERKRKSRSPSPIRFRDR
RGRSNSRSPYRYTRQPGPELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGKVRDVRLI
MDNKTRRSKGISYVEFQDTESVPLAIGLTNQKLLGVPIIVQPSQAEKNRLANAANILQKG
NSGPMRLYVGSLHFNITEDMLRGIFEPFGAIEDIKLIRDHETSRSQGYGFISFKDAEDAK
KALEQLNGFELAGRPMKVGHVTERTGEAQGASMLDSDEMDRAGIDLGATGRLQLMAKLAE
GTGFQIPDYAASALNAGSGTANASTSVSTAMTAAAGQPAPPTTAATTVSTAPPIATQCFM
LSNMFDPNSESRSNWDQEIRDDVIDECNKHGGVLHIFVDKASPQGNVYVKCPTIAAAVAS
VNALHGRYFGGKMITAAYVPLPNYHSLFPEATRANQLLLPSSQALQAGFPSGMFPNMPTT
APVMR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgatgtagaggcaatgttggaagctccatacaagaaggaggatgat
ggaagaggcgatgcttcatctgagagagagaaaagaaaacatagagatcgtagcagggat
agagacagggaaaaaaggcatggccaccgtgacaaagacaggaaagatcgagatcgagac
agagaccgagatagaaaagacagggatagaaagaggagcaggagtagagaccgtgaaaga
aaggaacgcaaaaggagtaggagcagagatcgagataggagaaaggaaaagaggcgaagt
cgcagccgagaaaggaagaggaaaagcagaagtccatcaccaatccggttccgtgaccga
cgagggcgtagtaacagcagaagtccttacagatacacaaggcagccaggtccagagctt
accccagaggaaagagatgctagaacagtgttctgcatgcaactgtcagccagaattcgt
ccaagggaccttgaagaattcttttcttctgttggcaaggtgcgagatgttcgtctgatt
atggataataaaaccaggagatccaaaggaatttcttatgtagagtttcaggatacagaa
tctgtgccattagccattggattaacaaaccaaaaactcttaggtgtgccaattatagtt
cagccctctcaagcagagaaaaatagacttgctaatgctgcaaacattctacagaaaggc
aactctggtccaatgagattatatgtgggatctttacatttcaacataacagaagatatg
ttacggggaatattcgaaccgtttggtgcaatcgaagatataaaattaatacgtgatcat
gaaacatcaagatctcagggttacggattcatctcgttcaaagatgcagaagacgctaag
aaagcattagaacagttgaatggtttcgagcttgctggccgtccaatgaaagttgggcat
gtgacagaacgaacaggagaggcccagggagcttccatgttagatagtgatgagatggac
agagctggtattgacttgggagcaacaggacgactacaactgatggccaagttagcagaa
ggaaccggattccaaattccagattatgctgccagtgcattgaatgctggtagtggtaca
gccaatgcctctacgagtgtgtcaacggctatgacagctgctgcaggccagcctgctcca
cccactacagcagccaccacggtgtccaccgctccacctatagccactcaatgcttcatg
ttgtcaaacatgttcgatccgaactcagaatcaaggtcaaactgggatcaagagattcgt
gatgatgttattgatgagtgcaacaagcatggaggagtcctccacatatttgttgacaag
gcttcaccacaaggaaacgtttatgtcaaatgtccaacaattgcagcagctgtagcatct
gttaatgcactccatggtcgctactttggaggaaaaatgataacggcagcttatgttccc
ttgcctaactaccactcattgttccccgaagctacacgagctaaccagctattgttaccc
tcatcacaagccctacaggcaggatttccatcaggaatgtttccaaacatgcccacaaca
gctccagtgatgcgatga
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