Argopecten irradians (bay scallop): 138316158
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Entry
138316158 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138316158
Membrane trafficking [BR:
airr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
138316158
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
CUB_M02D8_5_2nd
CUB_M02D8_5_3rd
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-GeneID:
138316158
NCBI-ProteinID:
XP_069113806
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Position
2:61403559..61429663
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AA seq
815 aa
AA seq
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MTMLNFGLKVLSVTYLMNLMGPCVRSQSTDICKSEEYNKDHGTITSPNYPSPYPTNFCKD
WFITGNTNDVITISFKMFDVETGILKSCDRDFLEIGPDPKIKICGDINNIQRVYISNTKH
VRIHFNSDYMTTGKGFELMYIMGPLSMRKCPQERFRCDNGKCIYKEWKCNGVAECEDDSD
EADCPHKVPSTTATTTVICTNSSLLCEDLTTGSNRCIPRSQWCDGERDCLYGEDEDKKLC
PTFKCNSHIDRQTGFVVSPNFPKDYLNNLNCTWTIHVQDMSAQVQLRFVKFELQNEAGTD
FLTVYDGTYHEGKVIGVYYGGLENVPTLLESTSDYITLKFQTNGVRAESGFNITFQKKGV
CLPDQSSCGPIEKDCYPKDKACDGMWNCRIHGGDEKGCGSCDKDHFRCGLKDSRQCYEEK
QRCNGISRCAELEDELNCNSVLCGSHNGTFLCDNKRCIYETWKCDKTNDCGDNSDEVDCP
RSTNLITIAAVAGSLICALLLVVAMGCTCKLYNLRMQQFHGPRHETPLTRMYAEFMRRRA
PPPYHEAMLTSRPYDEVRQELAEQTNQNETSGSRSRRHRRRTARLARQQQIASQNPAGQS
GEQNDSCPPDTTNNQHPEGSTGESSQTVNSSNMTWNTDSHSSRLALIADNSSDTTEGPDE
SGDDTDQQDGEHVSFSNNIGITARWQRPRNSGKENSSSNECQNLLQPDRRPRWRPEPPDS
PISAGRGSGDITTTSCDSVDPSSVVTGDNCDNDNESDKSCDTDLLGASSSSLCQGENLIS
ITDPGVSRVPRQTSDSSSDTDAIVLGENSSQFELF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgctgaattttggattaaaagttttgagtgtgacgtaccttatgaatctgatg
ggtccatgtgtcaggtcccagtctacagacatttgtaagagtgaggagtacaacaaggat
catggcactattaccagccccaactacccatcaccatacccaaccaacttctgtaaggac
tggttcatcactggtaacaccaacgatgtcatcaccatcagttttaagatgtttgatgtt
gagactggtatcctgaagtcttgtgaccgtgacttccttgagattgggccagacccaaag
atcaaaatatgtggtgacatcaacaacatccagagggtttacatctcaaataccaaacat
gtcagaattcattttaactctgactacatgacaacgggcaagggcttcgagctgatgtat
atcatgggtccattgtctatgaggaaatgcccacaggagcggttccgctgtgacaatggg
aagtgtatctataaggagtggaagtgtaatggcgtagcagagtgtgaggatgatagtgat
gaagcagactgtcctcataaagtcccctcgacaacagctacgacgactgtgatttgtacc
aatagcagtttgctgtgtgaggacctgacaacgggtagtaatcggtgtataccaagatct
cagtggtgtgacggggagcgtgactgtctgtacggagaggatgaggataagaaactgtgt
ccgacctttaagtgtaacagtcacattgaccgccagacagggttcgtagtatcaccaaac
tttcccaaagattacctcaacaatctcaactgtacttggacaatccatgtccaggatatg
tctgctcaggttcaacttaggtttgtaaaatttgaacttcaaaatgaggctgggaccgat
ttcctaacagtgtatgatgggacgtaccatgaaggcaaggtcatcggtgtgtattacggg
ggactagagaatgttcctactctgttggaatccacatctgattacatcactctcaagttc
caaacaaatggtgtccgagctgaaagtggatttaacatcacattccaaaagaaaggagta
tgtctcccagaccagtcatcgtgtggaccgatagagaaagactgttaccctaaagataaa
gcatgtgatggcatgtggaactgtcgcattcatggaggagatgagaagggctgtggttca
tgtgacaaggatcacttccgctgtggcctaaaagacagtcgacaatgttatgaggagaag
cagaggtgtaatggaatctcacgatgtgccgagctggaggatgaactgaactgtaattct
gttttatgtggctcacataatggaacttttctctgtgataataagcggtgtatttatgag
acgtggaaatgtgataaaacaaatgactgtggtgacaatagtgatgaagtggactgtcca
aggagtaccaatctaatcactatagctgctgtggctggctctctgatctgtgccctgctg
ttggtggtggccatggggtgtacatgtaaactgtacaatttacggatgcagcagttccat
ggaccacgacatgagaccccactcacacggatgtatgctgagtttatgaggagaagggcc
ccaccgccctatcacgaggccatgctgacatcacgaccttatgacgaagtcagacaggaa
cttgcagaacaaaccaaccagaatgaaacatcaggatctcgttctcgacgtcatcggcgt
cgaaccgcacgtttagcacgtcaacagcagatagcctcacaaaaccctgcaggtcaatct
ggtgaacaaaatgatagctgtccacctgatacaacaaacaaccagcatcctgaaggaagt
acaggtgaaagttcacagactgtaaatagttccaatatgacatggaatacagactctcat
tcctctagactagcacttatagcagacaatagtagtgatacaacagaaggaccggacgaa
tcaggagacgacaccgatcagcaagatggtgaacatgtcagtttctcaaataatattggg
attacagcaagatggcaacgcccaagaaattctgggaaagaaaatagtagtagtaacgag
tgtcaaaatctccttcagccagaccgccgtccaaggtggcggccagaacctccagactcg
ccgatctccgctggccggggaagtggcgacatcactacaacctcatgtgacagtgttgat
ccgtcttctgttgtcactggagacaattgtgataacgataatgaatctgataaatcctgt
gatactgatctgttgggtgcttcttcctcatcactttgtcagggggaaaacctcatctct
ataactgatcctggcgtcagcagggtgccacgtcagacaagtgattcctccagtgataca
gatgctatagtactcggagaaaactcatctcaatttgagttattttga
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