Argopecten irradians (bay scallop): 138316227
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Entry
138316227 CDS
T10542
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138316227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138316227
03041 Spliceosome [BR:
airr03041
]
138316227
03036 Chromosome and associated proteins [BR:
airr03036
]
138316227
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138316227
Spliceosome [BR:
airr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138316227
Complex B
138316227
Complex C
U2 SnRNP specific factors
138316227
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
138316227
TFTC complex
138316227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
138316227
NCBI-ProteinID:
XP_069113923
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All DBs
Position
2:complement(64870619..64897887)
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AA seq
1216 aa
AA seq
DB search
MYLYNLTLQRSTGISSAIHGNFSGSKLQEVVVSRGKMLELLRHDPNTGKIYPILSVEVFG
MIRSLMPFRLTGGNKDYIVVGSDSGRIVILEYVPQKNMFEKIHQETFGKSGCRRIVPGQY
MAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLVYHMVGVDVGFENP
TFACLEIDYEDADTDPTGEAGQQTQQWLTYYELDLGLNHVVRKYSEHLEEHANFLVSVPG
GSDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLEVDDEMVVEIHLKYFDTVPVSASMCVLKSGFLFVASEFGNHHLYQ
IAQLGDDDDEPRFSSNQPLEEGETFFFSPRPLKNLVMVDEMDSLSPITSCQIADLANEDT
PQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTISCSQLGDDALVQIYPDGIRHIRSDKRVNEWKTPG
KKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKDMSSDVVCMALGRVPVGEQ
RCRFLAVGLADNTVRVVSLDPTDCLSPLSMQAMPEPPESLCIVEMGGTEAKEETGETGSV
GGLFLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGLRPVKLFRISMQGSEAVLAMSSRSW
LSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSYP
LQYTPRKFVIHPESSNLVIIETDHNAYTEATKMERKQQMAEEMVESVNEEQREMAAEMAA
AFLNEELPETIFGSPKAGSGMWASLIRVINPITGQTLDKIQLEQNEAAHSIALVKFASRG
DDVFVLVGVVKDLVLNPRSLGGGYVYTYQLRDGEKLEFLHKTSMEDMPGAIAPFQGRALI
GVGKYLRIYDIGKKKLLRKCENKHVPNFIVSIHTLGNRVVVADVQESFHFVRYKRQENQL
IVFADDTNPRWITASCMLDYNTVSGADKFGNITIIRLPTDISDEVDEDPTGNKALWDRGV
LNGASQKTEIVSNFHIGEVVTSLQKATLIPGGSESLVYTTLSGGIGMLVPFTSHEDHDFF
QHLEMYMRSEHPPLCGRDHLSFRSYYFPVKNVIDGDVCEMFNSIDISKQKALSEELDRTP
SEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacctaaccctgcagagatctactgggatctcttcggcaatccatggc
aacttctccggctccaagttgcaggaggtggtcgtgtcccggggtaagatgttggagctg
cttcgccatgaccccaacactggaaaaatctatcctatcttgtctgtagaagtgtttggt
atgatcagatcactgatgcccttcagactcacaggaggaaacaaagattacatagttgtc
gggtccgactctggcaggatagttattttggagtatgtaccacaaaagaatatgtttgag
aagatccaccaagaaacatttgggaaaagtggctgtaggagaattgtacctggacagtac
atggctgtggatcctaaaggcagagctgtcatgattggagctgtagaaaagcagaagctg
gtatatatattgaacagagatgcccaagcacgactgaccatctcctctcctttagaggca
cacaaggccaacacccttgtctaccacatggttggggtagatgttggctttgaaaacccc
acatttgcctgtcttgaaattgactacgaggatgccgatactgaccctacaggagaagct
gggcaacagacacagcagtggcttacatactatgaacttgatcttggactcaatcatgtc
gtccgtaaatactcagaacatttggaagaacatgctaacttccttgtgtcagtgcctgga
ggaagtgacggtccaagtggtgtgttgatctgctcagaaaattatattacctacaaaaat
ttaggggaccagcctgatatccgatgtcctattcctcgtcgaagaaatgacttggatgac
ccagagagaggcatgatttttgtctgcagtgctactcacaaaacaaaatctatgtttttc
ttcctggcacaaacagaacaaggggacatattcaaaataacacttgaagttgatgatgaa
atggttgtagagattcacctaaaatattttgacacagtaccagtatcagccagtatgtgt
gtgctcaagtcaggattcctgtttgtggcatcagagtttggaaaccatcacctgtaccag
attgctcagcttggagatgatgatgacgagcctcgcttcagcagtaaccagccattagag
gaaggcgaaacattctttttctctccacggccactcaaaaatcttgtcatggtagatgaa
atggatagtctgtctccaatcacctcatgtcagattgctgatttggctaatgaagatacc
cctcaactctacacactatgtggacgtggcccacgctctactcttcgggtgctacgtcat
ggacttgaggtgtctgagatggcggtgtctgaactgccaggtaacccgaatgctgtgtgg
actgtgaagaaaaacatagaggacgagtttgatgcttatatcattgtgtccttcgtgaat
gccactctggtactgtctatcggagagactgtggaagaagtgacagattctggtttcctg
ggaaccactccaaccatttcctgttcacagcttggagacgatgcgctagttcagatttat
ccagatggaatccgtcatattcgttcagacaaacgtgtgaatgaatggaaaactccaggc
aagaaaaacattgtcaagtgtgctgtgaaccagagacaggttgtcatagccctcactggt
ggagagcttgtgtacttcgaaatggacccaacaggccagctgaacgagtacacagagaga
aaggacatgtcctcagatgttgtctgtatggcactgggcagagtccctgttggagaacag
cgctgtcgatttctggctgtaggattagctgataacacagtccgagtggtgtccttagat
cctacagattgcctgtccccactgagtatgcaggccatgcctgagcctcccgagtcacta
tgtatagtggagatgggaggaactgaggcgaaggaggaaactggtgaaacaggctccgta
ggaggcctcttcctcaacattggtctacagaatggagtattacttcgtactgtattggac
acagtgactggtgatctgtccgacactaggaccagatatctaggtctgagaccggtgaaa
ctcttcagaatcagcatgcagggatccgaggctgtactggctatgtccagtagatcgtgg
ctgagctacacctaccagaaccgcttccatcttactcccctctcatatgagaccttagag
tatgcctcaggctttgcttcagaacagtgtccagagggaattgtcgccatttcaacaaat
acactcaggattttagccctggagaagctgggagcagtattcaatcaggtgtcctatcca
ctacagtacacacctcgtaaatttgttatacatcccgagtccagtaaccttgtgattata
gagacggaccacaatgcctatacagaagccaccaagatggagaggaaacaacagatggct
gaggaaatggtagaatctgtgaatgaggaacaaagagagatggcagcagaaatggcagca
gctttcctgaatgaagaattaccagagacaatatttggctcccccaaggcagggtcaggc
atgtgggcatccttgatcagggtcatcaatcctatcacagggcagaccttggacaagata
cagctggagcagaatgaggcagctcacagcattgccttggtgaagtttgcaagtcgtggt
gatgatgtgtttgtgttagttggtgtagtgaaagacttggtcctcaatccccgctctcta
ggtggtggctatgtgtatacataccagttaagggatggtgaaaaactggaattcctccac
aaaacctcaatggaggatatgccaggtgctatcgccccattccagggcagggcactaatc
ggtgtcggaaaatacttacgaatctatgacatcggtaaaaagaaattactcaggaaatgt
gaaaacaagcatgtacccaacttcattgtgagtatccatacccttggtaatcgtgtggtg
gtagcagatgtacaggagagcttccactttgtacggtacaaacgccaggaaaaccagctg
attgtgttcgcagacgataccaaccctcgctggatcactgcctcatgtatgctagactac
aacactgttagtggagcagacaaatttggaaatataacaattattcgtttgcccactgat
atcagtgatgaggtagatgaagatccaacaggaaataaggctttgtgggacagaggcgtg
ctcaatggagcctcacaaaagacggaaatagtgtcaaacttccacattggtgaggtagtg
acctccctacagaaagccaccttgattcccgggggatctgaatctctggtttacaccaca
ctctctggtggtatcggcatgctggttcccttcacatcacacgaggaccacgactttttc
cagcatctagagatgtacatgagatctgaacacccgccactgtgtggccgagaccatctg
tccttccgctcatactacttccctgtcaagaatgtgatagatggagacgtatgtgagatg
ttcaattccatagacatctcaaaacagaaggctttgtcagaggagcttgaccgcacacca
agtgaggtttcaaagaaattagaagatataagaacaagatatgctttctaa
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integrated database retrieval system