KEGG   Argopecten irradians (bay scallop): 138316227
Entry
138316227         CDS       T10542                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138316227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:airr03021]
    138316227
   03041 Spliceosome [BR:airr03041]
    138316227
   03036 Chromosome and associated proteins [BR:airr03036]
    138316227
Transcription machinery [BR:airr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     138316227
Spliceosome [BR:airr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    138316227
 Complex B
    138316227
 Complex C
   U2 SnRNP specific factors
    138316227
Chromosome and associated proteins [BR:airr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     138316227
    TFTC complex
     138316227
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML
Other DBs
NCBI-GeneID: 138316227
NCBI-ProteinID: XP_069113923
LinkDB
Position
2:complement(64870619..64897887)
AA seq 1216 aa
MYLYNLTLQRSTGISSAIHGNFSGSKLQEVVVSRGKMLELLRHDPNTGKIYPILSVEVFG
MIRSLMPFRLTGGNKDYIVVGSDSGRIVILEYVPQKNMFEKIHQETFGKSGCRRIVPGQY
MAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLVYHMVGVDVGFENP
TFACLEIDYEDADTDPTGEAGQQTQQWLTYYELDLGLNHVVRKYSEHLEEHANFLVSVPG
GSDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLEVDDEMVVEIHLKYFDTVPVSASMCVLKSGFLFVASEFGNHHLYQ
IAQLGDDDDEPRFSSNQPLEEGETFFFSPRPLKNLVMVDEMDSLSPITSCQIADLANEDT
PQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTISCSQLGDDALVQIYPDGIRHIRSDKRVNEWKTPG
KKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKDMSSDVVCMALGRVPVGEQ
RCRFLAVGLADNTVRVVSLDPTDCLSPLSMQAMPEPPESLCIVEMGGTEAKEETGETGSV
GGLFLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGLRPVKLFRISMQGSEAVLAMSSRSW
LSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSYP
LQYTPRKFVIHPESSNLVIIETDHNAYTEATKMERKQQMAEEMVESVNEEQREMAAEMAA
AFLNEELPETIFGSPKAGSGMWASLIRVINPITGQTLDKIQLEQNEAAHSIALVKFASRG
DDVFVLVGVVKDLVLNPRSLGGGYVYTYQLRDGEKLEFLHKTSMEDMPGAIAPFQGRALI
GVGKYLRIYDIGKKKLLRKCENKHVPNFIVSIHTLGNRVVVADVQESFHFVRYKRQENQL
IVFADDTNPRWITASCMLDYNTVSGADKFGNITIIRLPTDISDEVDEDPTGNKALWDRGV
LNGASQKTEIVSNFHIGEVVTSLQKATLIPGGSESLVYTTLSGGIGMLVPFTSHEDHDFF
QHLEMYMRSEHPPLCGRDHLSFRSYYFPVKNVIDGDVCEMFNSIDISKQKALSEELDRTP
SEVSKKLEDIRTRYAF
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgtatttgtacaacctaaccctgcagagatctactgggatctcttcggcaatccatggc
aacttctccggctccaagttgcaggaggtggtcgtgtcccggggtaagatgttggagctg
cttcgccatgaccccaacactggaaaaatctatcctatcttgtctgtagaagtgtttggt
atgatcagatcactgatgcccttcagactcacaggaggaaacaaagattacatagttgtc
gggtccgactctggcaggatagttattttggagtatgtaccacaaaagaatatgtttgag
aagatccaccaagaaacatttgggaaaagtggctgtaggagaattgtacctggacagtac
atggctgtggatcctaaaggcagagctgtcatgattggagctgtagaaaagcagaagctg
gtatatatattgaacagagatgcccaagcacgactgaccatctcctctcctttagaggca
cacaaggccaacacccttgtctaccacatggttggggtagatgttggctttgaaaacccc
acatttgcctgtcttgaaattgactacgaggatgccgatactgaccctacaggagaagct
gggcaacagacacagcagtggcttacatactatgaacttgatcttggactcaatcatgtc
gtccgtaaatactcagaacatttggaagaacatgctaacttccttgtgtcagtgcctgga
ggaagtgacggtccaagtggtgtgttgatctgctcagaaaattatattacctacaaaaat
ttaggggaccagcctgatatccgatgtcctattcctcgtcgaagaaatgacttggatgac
ccagagagaggcatgatttttgtctgcagtgctactcacaaaacaaaatctatgtttttc
ttcctggcacaaacagaacaaggggacatattcaaaataacacttgaagttgatgatgaa
atggttgtagagattcacctaaaatattttgacacagtaccagtatcagccagtatgtgt
gtgctcaagtcaggattcctgtttgtggcatcagagtttggaaaccatcacctgtaccag
attgctcagcttggagatgatgatgacgagcctcgcttcagcagtaaccagccattagag
gaaggcgaaacattctttttctctccacggccactcaaaaatcttgtcatggtagatgaa
atggatagtctgtctccaatcacctcatgtcagattgctgatttggctaatgaagatacc
cctcaactctacacactatgtggacgtggcccacgctctactcttcgggtgctacgtcat
ggacttgaggtgtctgagatggcggtgtctgaactgccaggtaacccgaatgctgtgtgg
actgtgaagaaaaacatagaggacgagtttgatgcttatatcattgtgtccttcgtgaat
gccactctggtactgtctatcggagagactgtggaagaagtgacagattctggtttcctg
ggaaccactccaaccatttcctgttcacagcttggagacgatgcgctagttcagatttat
ccagatggaatccgtcatattcgttcagacaaacgtgtgaatgaatggaaaactccaggc
aagaaaaacattgtcaagtgtgctgtgaaccagagacaggttgtcatagccctcactggt
ggagagcttgtgtacttcgaaatggacccaacaggccagctgaacgagtacacagagaga
aaggacatgtcctcagatgttgtctgtatggcactgggcagagtccctgttggagaacag
cgctgtcgatttctggctgtaggattagctgataacacagtccgagtggtgtccttagat
cctacagattgcctgtccccactgagtatgcaggccatgcctgagcctcccgagtcacta
tgtatagtggagatgggaggaactgaggcgaaggaggaaactggtgaaacaggctccgta
ggaggcctcttcctcaacattggtctacagaatggagtattacttcgtactgtattggac
acagtgactggtgatctgtccgacactaggaccagatatctaggtctgagaccggtgaaa
ctcttcagaatcagcatgcagggatccgaggctgtactggctatgtccagtagatcgtgg
ctgagctacacctaccagaaccgcttccatcttactcccctctcatatgagaccttagag
tatgcctcaggctttgcttcagaacagtgtccagagggaattgtcgccatttcaacaaat
acactcaggattttagccctggagaagctgggagcagtattcaatcaggtgtcctatcca
ctacagtacacacctcgtaaatttgttatacatcccgagtccagtaaccttgtgattata
gagacggaccacaatgcctatacagaagccaccaagatggagaggaaacaacagatggct
gaggaaatggtagaatctgtgaatgaggaacaaagagagatggcagcagaaatggcagca
gctttcctgaatgaagaattaccagagacaatatttggctcccccaaggcagggtcaggc
atgtgggcatccttgatcagggtcatcaatcctatcacagggcagaccttggacaagata
cagctggagcagaatgaggcagctcacagcattgccttggtgaagtttgcaagtcgtggt
gatgatgtgtttgtgttagttggtgtagtgaaagacttggtcctcaatccccgctctcta
ggtggtggctatgtgtatacataccagttaagggatggtgaaaaactggaattcctccac
aaaacctcaatggaggatatgccaggtgctatcgccccattccagggcagggcactaatc
ggtgtcggaaaatacttacgaatctatgacatcggtaaaaagaaattactcaggaaatgt
gaaaacaagcatgtacccaacttcattgtgagtatccatacccttggtaatcgtgtggtg
gtagcagatgtacaggagagcttccactttgtacggtacaaacgccaggaaaaccagctg
attgtgttcgcagacgataccaaccctcgctggatcactgcctcatgtatgctagactac
aacactgttagtggagcagacaaatttggaaatataacaattattcgtttgcccactgat
atcagtgatgaggtagatgaagatccaacaggaaataaggctttgtgggacagaggcgtg
ctcaatggagcctcacaaaagacggaaatagtgtcaaacttccacattggtgaggtagtg
acctccctacagaaagccaccttgattcccgggggatctgaatctctggtttacaccaca
ctctctggtggtatcggcatgctggttcccttcacatcacacgaggaccacgactttttc
cagcatctagagatgtacatgagatctgaacacccgccactgtgtggccgagaccatctg
tccttccgctcatactacttccctgtcaagaatgtgatagatggagacgtatgtgagatg
ttcaattccatagacatctcaaaacagaaggctttgtcagaggagcttgaccgcacacca
agtgaggtttcaaagaaattagaagatataagaacaagatatgctttctaa

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