Argopecten irradians (bay scallop): 138317575
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Entry
138317575 CDS
T10542
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138317575
Spliceosome [BR:
airr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138317575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
138317575
NCBI-ProteinID:
XP_069115443
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All DBs
Position
3:12722159..12768983
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AA seq
606 aa
AA seq
DB search
MAMNYDNLNGGDMDTSDSRKRPLDTEVENGVPKRSNQGGGTPDQLQHMMTDDSNGDTTLG
DNIHLKILVPSIAAGAIIGKGGETIAQVQKEAGARVKMSKANDFYPGTTERVCLIMGGIE
AVRRVQNFIMEKIREKPDPNPKPEETNKNFERHRQQVKVLVPNSTAGMIIGKGGNYIKQI
KEESGAYIQISQKSKETNLPERCVTVAGDHDANRKAVDLILQKVVEDPQSGSCPNISYAD
YTGPVASANPTGSPFANTNFTQNRSQEMVVNNSNYPQQGATAYSIGFNGNGFNNSIGSGI
SNLNLNAALGGGPGGSMSSGALDNLKMTLRSSGYSDQATEEISLAMNTLASYGILGMIGL
NQVPGVSSVGPMANMPVTGGAANAQMASINMASSMAATNMMVTPTSSQQNNGSYLNTSSN
SATGSLFGPVGSGTSAGLGSSGSTGAGSSLFGSSSPSIGNERYGGSPMLNDSFTGATSYA
SNPATYPQQAIAERSPNINLNQNSFGLGTGMCSPTEDKQPPQKQDLEVSESIVGAILGPG
GKGIVELQKFTQTNIQISKKGVYVPGTRNRIVTITGIANNIQKATYLIQQRIQQEEIKRA
HQAGAR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaactacgacaacctgaatggaggtgatatggacacttctgactcaaggaaa
cggccattggacacagaagtagaaaatggggtccctaaacgatctaaccagggaggagga
acacccgaccagctccagcatatgatgacggacgactcgaatggcgacaccactctcggg
gacaatatacatctcaagatcctcgtccccagcatcgctgcaggagctatcatcggtaaa
ggtggagaaaccatcgcccaagtacaaaaggaagctggcgcccgagttaaaatgtccaaa
gcaaatgacttctacccaggaacaacagaaagagtatgcctcataatgggagggatagaa
gctgtcagaagagtccagaatttcatcatggaaaaaataagagaaaaaccagaccccaat
cctaaaccagaagaaacaaacaaaaactttgaaagacacagacaacaggtgaaggtctta
gtaccaaacagtacagctgggatgatcataggcaagggaggcaactacattaaacagatt
aaggaggaaagtggggcttacattcaaatatcccagaagtctaaagagacaaatttgcca
gaacggtgtgtcactgttgcgggcgaccatgatgcaaaccgtaaggcagttgacctgatt
ctacagaaggtggtggaggacccccagagtggcagctgccctaacatcagttatgcagac
tacacaggtccggtggctagtgctaatcccacaggctctcctttcgccaatacaaacttc
acacaaaatcgcagccaggagatggttgtcaataacagtaactacccacaacagggtgct
acagcgtacagcataggcttcaatggaaatggatttaacaacagcattggcagcggtatt
tcaaacctcaatctcaatgctgccttaggaggcggtccaggtggaagcatgtccagtggt
gctctagataacttaaaaatgacccttcggagcagtgggtattcagatcaggctacggaa
gaaatttccctagctatgaacactttagctagttatggaatattaggaatgattggactt
aatcaggtcccaggagtaagcagcgtgggacccatggctaatatgcctgtcacagggggt
gctgcaaatgcccagatggctagtataaatatggcttcctccatggcagccaccaatatg
atggtcactcctacatcttctcagcagaacaacggctcataccttaatactagcagtaac
tccgcaactgggagcttgtttggtccagtggggagtggtacgtcggctggactgggaagt
tcaggctctacaggagctggatctagtctgtttgggagttcttcccctagtataggcaac
gagcgatatggtggcagtcccatgttgaatgactcttttacaggtgccacaagttatgcg
agcaatccagctacataccctcaacaggctattgcagagcgttctcctaacatcaacctg
aatcaaaattcatttggtctgggtacaggcatgtgtagcccgacagaggacaaacagccg
ccccagaaacaggatctggaagtgtccgagagtatagtgggcgccattttaggacctggt
gggaagggtattgtggagttacaaaagtttactcaaaccaacatccagatctctaaaaaa
ggtgtatacgttccaggaacaagaaaccgcatcgtcacaattactggtattgccaacaat
attcagaaagctacctacctaatacaacagcgtattcagcaggaggaaatcaagagagca
catcaagcaggggctcgctag
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