Argopecten irradians (bay scallop): 138317667
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Entry
138317667 CDS
T10542
Name
(RefSeq) ATP-dependent RNA helicase me31b-like isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138317667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138317667
03036 Chromosome and associated proteins [BR:
airr03036
]
138317667
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138317667
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138317667
mRNA degradation factors
5'-3' decay
Decapping complex
138317667
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138317667
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
138317667
NCBI-ProteinID:
XP_069115580
LinkDB
All DBs
Position
3
Genome browser
AA seq
385 aa
AA seq
DB search
MGIFEKGWEQPSPIQEASIPIALTGRDILARAKNGTGKTGAYTIPIIERCDPSRNEVQAL
VIVPTRELALQTSQICIEISKHIGCKVMVTTGGTNLKDDIMRLYDPVHIIIATPGRILDL
MNKRLVKISKCGMLVLDEADKLLSQDFKGMLDSIIGHLPNNRQILLYSATFPLSVEQFMR
KHLDSPYEINLMDELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNSTNRVEL
LAKKITELGYSCFYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVNVVINF
DFPKHSETYLHRIGRSGRYGHLGVAINLITYDDRFSLHRIESELGTEIKPIPKNIDKSLY
VAEFHQERDDDEDIPNSSNGAKGGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctttgaaaaaggttgggaacaaccatcacccattcaagaggctagcataccc
attgcccttactgggcgtgatattttagctcgagctaagaatggtactggaaagactgga
gcatacactatccccattattgagagatgcgaccccagtcgcaatgaggtacaagcactt
gtgatagtacccacccgagagctagccctacagacaagtcagatatgcattgagataagt
aaacatattggatgtaaagtgatggttacaactggaggaaccaacctgaaggacgacatt
atgagattatacgaccctgttcacattatcatagccacaccaggcagaattctagacttg
atgaacaaacgattagtgaagattagcaagtgtggcatgctggttctggacgaggcggac
aaactgctgtctcaggattttaaggggatgttggacagtattattggccacctgcctaac
aacagacaaatactcctgtactcggctaccttccccctcagtgtggagcagtttatgagg
aagcaccttgacagtccatatgaaatcaacttgatggatgagttaacattaaagggagtg
acacagtattatgcttttgtacaggagaaacagaaggttcactgtctcaacacactgttc
tcaaagttgcaaatcaaccagtctattatattttgtaactccacaaatcgtgtagaactc
ttagccaaaaagatcacagaacttggttactcctgtttctacattcatgccaagatgaac
cagcagcacagaaaccgtgtattccacgacttcagacaaggactctgtaggaatctggta
tgctcagatttgttcacgagaggaattgacatccaggcagtgaacgttgttataaacttt
gacttccccaagcattcagaaacatatctccacaggattgggagatccggtcgatacggc
catcttggggtcgctatcaatctcatcacatatgatgacagattttcactacacagaatc
gagagtgagctgggcacagagatcaaaccaatccctaagaatatagacaagtccttgtat
gtggcagagtttcaccaagaaagagatgatgatgaagacatccccaacagctctaatggg
gctaaaggaggacagtga
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