Argopecten irradians (bay scallop): 138317673
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Entry
138317673 CDS
T10542
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03010
Ribosome
airr04120
Ubiquitin mediated proteolysis
airr04137
Mitophagy - animal
airr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
138317673
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138317673
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138317673
04137 Mitophagy - animal
138317673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
airr03011
]
138317673
04121 Ubiquitin system [BR:
airr04121
]
138317673
Ribosome [BR:
airr03011
]
Ribosomal proteins
Eukaryotes
Large subunit
138317673
Archaea
138317673
Ubiquitin system [BR:
airr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
138317673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
138317673
NCBI-ProteinID:
XP_069115600
LinkDB
All DBs
Position
3:16435378..16437858
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRILASKYNCDKMICRKCYARLHPRATNCRKRKCGHTNN
IRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctaacggggaagaccatcaccctcgaggtagagccctcc
gactctatcgagaatgtaaaggccaagattcaggataaggaaggcattcctccagatcag
cagaggttgatcttcgccggtaaacagctggaagatggccgtaccctctccgactataac
atccagaaggagtccactctccatttggtgctgcgtttgagaggaggaatcatcgagcct
agtttgaggatccttgcctccaaatacaactgtgacaagatgatctgccgcaagtgttat
gcccgtctgcatcccagggccactaactgtcgtaagaggaagtgtggacacaccaacaac
atccgccccaagaagaagctgaagtag
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