KEGG   Argopecten irradians (bay scallop): 138317870
Entry
138317870         CDS       T10542                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03030  DNA replication
airr03410  Base excision repair
airr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138317870
   03410 Base excision repair
    138317870
   03420 Nucleotide excision repair
    138317870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:airr03032]
    138317870
   03400 DNA repair and recombination proteins [BR:airr03400]
    138317870
Enzymes [BR:airr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     138317870
DNA replication proteins [BR:airr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    138317870
DNA repair and recombination proteins [BR:airr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      138317870
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 138317870
NCBI-ProteinID: XP_069115944
LinkDB
Position
3:complement(22343918..22389398)
AA seq 2270 aa
MVLQNSGRFKADRSEKSEGSGREDTSEKRLERANLNDEIDSKFGFERYKDPVERTGWLIN
MHPADILDENKRLISAVDYYFLEEDGGRFKATFPFRPYFFVATKKEYEREVASFLTKKFS
GKIASVETVYKEDLDLPNHLVGLKRTYLKLSFLSVEDLTKVKREINPAVTKNKEREKSSE
AYTTMFSSYLTGEDNNRNSKKMVDQMDNLMDIREYDVPYHVRVSIDLKINVGHWYSVRGR
GSLPVEIRPREDLVDRPDPVVLAFDIETTKLPLKFPDASTDQIMMISYMIDGQGYLITNR
EIVSQDVEDFEYTPRPEFEGPFIIFNEPDEVTLIRRFFDHVLDVRPHIFVTYNGDMFDWP
FVEARAALHELYMSREIGFQKDNQGEYKSRPSIHMDCLRWVKRDSYLPVGSQGLKAVAKA
KLRYNPVEMDPEDMCRMASEEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPD
EVLRKGSGTLCEALLMVQAYHANIVFPNKQMAVFNKLTEDGHVLDSETYVGGHVEALESG
VFRADLPCRFRMVPEAFQNLIDKVHKTMKHAIEEEEKIPMDTVTNLDEVCTDIIERLAML
RDCPNRLENPIIYHLDVAAMYPNIILTNRLQPPAIVDEATCAACDFNKPGAQCQRKMTWM
WRGETMPASRSEFQRIQQQLENEKFPPSVPGGEPRAFHQLNREEQATIEKKRLADYCKKA
YKKVHSTKMEEKTATICQRENSFYVDTVRDFRDRRYEFKGLVKVWKRKLAEAEESKDAAE
IKRANGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVCYTGAHIITKAKEIV
EQIGRPLELDTDGIWCVLPATFPENYVLKTTNPKKAKVTISYPGAMLNIMVKEFFTNDQY
QELVDHNKLQYSLRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKG
FEVKRNGELELIKIFQSSVFEAFLKGDTLESCYAAVAKVADYWLDVLFSKAANMPDSELF
ELIAEKRRMSRTLEDYGSQKSTSISTARRLAEFLGDQMVKDAGISCNYVISKKPDGAPVT
ERAIPLAIFQAEPSVRKHYLRKWLKSPAATDFEIREILDWQYYIERLGGSVMKIITIPAA
LQMVANPVPRIHHPDWLHKKLLERNDVFKQKKISEIFAPMQRQKPQESSEELFPDKSTID
IEDVGGRSKTGVGMAVAHKRKRMSLDNSETSQNDSQLLESSQTWREILGPAPPMGKTKEE
RAVWLEYHKKKWELQAKDRQDRKRRRVDFGDAPTGRAVSSRTGLGGFLRRTARSIMDMPW
QIVQLMETSYPGQFKLWALIGSDLHAMKLNVPRIFYVNQKSPKEGEGALWKKVIKTLPRS
HPVFNLYEYSVPEDVYQEHINEISADLSSPDIEGVYETQVPLEFRALVRLGCVATVNRDF
AKYMSGRETDTFDMENLDFRTLAQFTYLEPGAIKHLYLYHHISGTKSMFGLFFPMSKKAT
VFVVDTVRSDQMPNLSALYNGERNSKVTKGAAEEMLPPSHHTFDIKLEKDVRQVHRNIQR
ILSSYKDEKRGPTFIAIQSPHDFQHLTSSMPGLQDFPLVPIHISDSDSLYNVLDWQRVGS
RRMLQHYLNVDIILHAMVEQCRYLHIPVGNMPRDITLYGCDLFLARHLHKHNHIMWCSVT
ERPDLGGKEADDSRLCMELEENSSVEVNHPGTYPSMCVELDIASLAVNTIIESSHVNDQE
GASAVSFDTMPQSSLEDMVQGQGAATYLASYDETALCSTTFRILKSMVQGWVRDVTMYGN
VFADNQIIHFYRWLRSTGAQLYDPALRRTLHNMMKKVFMQLIAEFKRLGSTIVYANFNRI
ILCTKKRRLVDALSYVEYITNSIKSRELFHLIELSYEQCWEYCIWLDPANYGGVKGRLPS
AAMTDSSQPNPDRDAEQDSDEEEPRQEEEELNKSDQEDEPEIEMNWNIMHFLPEAGACQT
NFNMIVAGYILSVYTNVMEEHQRLTPGNTPVKRRHNSQSQSQQKPLETSATPATVTFSQE
LIAGDLAQQMFAITQKIQKKLAGNTNNAAVEFPQRPGSHLLLKNPALEFVKSVCQVLALD
SNITLQITKLKRDLLKLIGVGEFSSDAKFLDPCLSYVLPEVICKSCNHVRDLDLCRDPYL
NQNDSDAAWSCVQCKTAYDMTEMEQCLVDSINRKSMAYVLQDLKCVKCQGVKEGNMTKYC
QCAGNYTTTADLKDFEKRLRTFRGIASHYNMVVLMETVDWIIKMNPSISS
NT seq 6813 nt   +upstreamnt  +downstreamnt
atggtcttacaaaacagtggaagatttaaagctgaccgatccgaaaaatcagaaggatct
ggtcgagaagacacttctgaaaagagattggaacgagcaaacctaaatgatgaaattgat
tccaaatttggatttgagagatacaaggacccagtggaaaggacaggatggctcatcaac
atgcaccctgccgatattttggatgagaacaaaagacttataagtgctgttgattattat
ttcttggaagaagatggaggcagattcaaggccacctttccattccgtccgtactttttt
gtggccactaagaaggaatatgagagagaagtggcatcttttctcactaaaaaattctca
ggaaaaattgcttctgtggaaactgtgtataaagaggacttggatctgccaaatcacctg
gttgggctcaagagaacatatctcaagctgtcctttctgtcagtggaggatttaactaaa
gttaaacgagaaatcaatccagcagtaaccaagaacaaggaaagagagaagtcgagtgaa
gcttacacaacaatgttctctagttacttaactggtgaggacaacaatagaaactcaaag
aagatggtggaccagatggacaacttgatggacatcagagaatatgatgtgccgtaccat
gtgagggtgtcaatcgacctaaaaattaatgtagggcactggtactctgtccgggggcgt
ggctcgttacctgtggagatacggccgcgagaagaccttgtagaccgaccagatccagtt
gtgttagcttttgacattgaaaccactaaattgccgttgaagtttcctgatgcatctact
gaccaaataatgatgatatcatacatgatagatggccagggctacctgatcactaataga
gagattgtctcccaggatgtggaggattttgagtatacaccaaggccagagtttgaggga
ccatttatcatatttaatgaacctgatgaggtgacattgatacggagattctttgaccac
gtactagacgttcggcctcacatctttgtgacgtataacggagatatgtttgattggcca
tttgtggaggctagggctgccctgcatgagctctacatgtcacgggaaattggttttcag
aaggacaaccaaggggaatacaagtctcgtccctccatacatatggactgccttcgctgg
gtaaagcgagacagttatctacctgtggggagtcaggggctaaaagcggtagctaaggcg
aagttacgttacaatcctgtagagatggaccccgaggatatgtgccgtatggcgagtgaa
gaacctcaggttttgtcaaattactcggtatctgatgctgtggcgacgtactacctgtac
atgaagtacgtccatccatttatcttcgccctgtgtactatcatccctatggagcctgat
gaggtactaaggaagggatcaggaactctgtgcgaggctctactcatggtgcaggcctac
catgccaacattgtcttccctaacaaacagatggctgtatttaacaaactcacggaagac
ggacatgtcctggactcagagacgtatgttggtggtcatgtagaagctctggagtcgggc
gtgtttcgagcggaccttccctgcaggtttaggatggtgcctgaagcctttcagaacttg
atagacaaggtccacaagacaatgaaacatgccattgaggaagaggagaaaatccccatg
gataccgtgacaaacttggacgaagtctgtacagatatcatagagcgcttggctatgtta
cgtgactgtcccaatcgtctggagaacccgattatttaccatctggacgtggctgctatg
tatcccaacattatcctaaccaacagacttcagcctcctgctattgtagacgaagccaca
tgcgctgcctgtgactttaataaaccgggcgctcagtgtcaacgcaagatgacttggatg
tggagaggggaaacaatgcctgcctctcgaagtgagttccagcggattcaacaacagtta
gagaatgagaagttcccaccgagtgtccctggcggagagccgcgtgcatttcaccagcta
aaccgtgaggaacaggcgaccatagagaaaaagagattagcagactactgtaagaaggcc
tataagaaagtgcactcaacaaaaatggaagaaaaaactgctacaatttgtcagagagaa
aactcgttttatgtcgacactgtcagagatttccgagacagacgttacgagttcaaaggt
cttgtaaaagtttggaagagaaaattagccgaggcagaggaatcgaaagacgcagcagaa
ataaaacgtgcgaatggtatggtggtcctgtacgattccctacagctggctcacaagtgt
atcctcaactctttctatggttatgtgatgaggaagggagcgcgatggtatagtatggag
atggccggagtcgtgtgttatactggagctcatatcatcaccaaagccaaggaaatcgtc
gaacagatcggacgtcctctcgagttggatactgatggaatttggtgtgtgttaccggca
accttcccagaaaattatgtcctaaaaacgacaaatcccaagaaagccaaagtgaccatc
tcctacccaggggccatgctcaatatcatggtcaaggaattcttcactaatgaccagtat
caggaactagtcgatcataacaaacttcaatactctttgaggagcgagaactccatcttc
ttcgaggtagacggtccgtacctggccatgatcttaccagcttcaaaggaggaaggcaag
aaactcaaaaagagatatgctgtcttcaactttgatggttctctagctgaactgaagggg
tttgaggtgaaaaggaatggtgagttagaattgataaagattttccagtcgtcggtgttt
gaggcgtttctgaagggggacacactggagtcatgttacgctgcggtcgccaaggtggct
gactactggttagatgttctcttcagtaaggctgcaaatatgccagactcggaacttttt
gagttgatcgctgaaaaaaggaggatgtcaagaacattagaggattatggatctcagaaa
tcaacatccatcagtacagccaggcgattagcagagttccttggagatcagatggtgaag
gatgcaggcatcagttgtaattatgtcatctccaaaaagccagacggtgctcctgtcact
gagagggcaattcctttggcaatattccaagccgagcctagtgtccgaaaacattatctg
aggaaatggctcaagagtcctgcagcaactgactttgaaattcgagagatcttagactgg
cagtactatatcgagcgacttggtggatcagtcatgaagatcatcactattccagcggct
ctacaaatggtcgccaatcccgtccctaggatccaccaccctgactggttacacaagaaa
cttctggagcgtaacgatgtcttcaaacagaagaagatcagcgagatatttgctcctatg
cagcgacagaaaccacaggaatcctccgaggaactgttccctgataaatctactatagac
atcgaggacgttggtggtcgatctaagaccggggtcggaatggctgtggcccacaaaagg
aaacggatgagtctggacaactccgagactagtcagaacgattctcagttactggaaagt
tcacagacatggcgagaaatactaggaccagctcctcccatgggtaaaacaaaggaggag
cgtgcagtttggcttgaataccacaagaagaaatgggagcttcaagccaaggacagacaa
gatcgtaaacgaaggagggtggacttcggtgatgctccgactggccgagctgtcagtagc
cggacgggtctcgggggatttctccgtcggacagctcgcagcatcatggacatgccttgg
caaatagttcagctgatggagaccagttatcctgggcagtttaaactgtgggctcttatc
ggcagtgacctacacgccatgaaacttaacgtgcctcgaatcttctacgtcaatcagaag
tcacccaaggaaggcgagggagccttgtggaagaaagtgatcaagactttaccgcgatcc
catcccgtgtttaacctgtacgagtatagtgtaccagaggatgtctatcaggaacacatc
aatgagataagtgccgatttgtcctcaccagacattgaaggagtgtacgagacacaggtc
cctctggaattccgagcactcgttcgtctgggctgtgtcgccaccgtcaacagagacttc
gccaagtacatgtcaggaagggagacagatacatttgacatggagaaccttgactttagg
acactggcacagtttacctacttagagcctggggccatcaaacatctgtatctctaccac
catatcagtggtacaaagtccatgtttggtttgtttttcccaatgtcgaagaaggccacg
gtttttgttgttgacacagttcggagtgaccagatgcctaatttgtctgctctctacaat
ggagagaggaacagcaaagtcaccaagggagcggccgaggaaatgttacccccatctcat
cacacgtttgacatcaaactagagaaggacgtgcgacaggtccatcgtaacatccagagg
atattgtcttcctacaaggatgagaaacgaggaccaacctttatagccattcagtcccct
catgatttccagcacctaacttctagtatgccaggccttcaagatttcccgctcgtacca
atacacatctctgacagtgatagcctgtataacgttctggactggcagagagttggcagt
cgacggatgttacaacactacctcaacgtcgacatcattctccacgcgatggtggaacag
tgccgttaccttcacatccccgttggaaacatgccgcgtgacatcactctgtacggctgt
gatctattcctcgctcgtcatctccacaaacacaaccacatcatgtggtgttcagtcaca
gaacggccagatcttggaggaaaagaggctgatgacagcaggctttgtatggaactggag
gagaatagtagcgtggaagtcaaccacccaggaacctaccccagtatgtgtgtggagttg
gacatcgctagtctggccgtcaacacgattatagagtcttcccatgtaaatgaccaagag
ggtgcgagtgctgtgagttttgacacgatgccgcagtcgtcattggaggatatggtccag
ggacaaggtgctgccacctacctagctagttatgatgagaccgccctctgttccaccaca
ttccgaatccttaaaagtatggtgcagggctgggtgagagatgtgacaatgtatgggaat
gtgttcgccgataaccagatcatacacttctacaggtggctacggtcaactggagcccag
ctgtatgatccagctctcagaagaacacttcacaatatgatgaagaaagtatttatgcag
cttatagctgagttcaagcgtcttggatcaactatagtctacgctaacttcaaccgaatc
attctgtgtacaaagaagcgccgccttgtagatgctttgtcctacgtggagtacatcacc
aacagtataaagtcacgagagttattccacttgatagaactctcctatgaacagtgctgg
gaatactgtatctggctagaccctgctaactacgggggcgtaaagggaagattaccatca
gctgccatgacagacagctctcagccgaaccctgaccgagatgcggaacaagacagtgat
gaggaggagcctagacaggaagaggaggagctaaataaatcggatcaggaggatgagccg
gagattgagatgaactggaatatcatgcatttcttaccagaggctggcgcctgtcagacc
aactttaatatgattgtggccgggtatattctgtcagtttacacaaacgtgatggaggaa
catcagcgtctgactcctggaaacacgcctgtgaaacgacgccataactcacagtcacaa
tctcaacagaaacctctggagacgagtgccaccccagccacagtgacgttttctcaggag
ctgatagccggtgatctggctcaacagatgtttgctataactcagaagattcagaagaag
ctggctggaaatacaaacaacgctgctgtagagtttccacagaggccaggctctcatctg
ctgctcaaaaacccagcactggagtttgtcaaatctgtttgtcaggtgttggcattggac
agtaatattaccctacagataaccaagcttaagcgagatctcctcaaacttattggagtc
ggcgagttttccagcgatgccaagttccttgacccctgtctgtcctacgtcctcccagag
gtcatctgcaagtcatgtaaccatgtccgtgaccttgacctttgtcgtgacccataccta
aatcaaaatgattctgatgcggcttggtcgtgtgtgcagtgtaagacagcctatgacatg
actgagatggagcaatgcctcgtcgactctatcaaccgaaagtctatggcctacgtactt
caggaccttaagtgtgtcaagtgtcagggggtgaaggaaggtaacatgactaagtactgt
caatgtgctggaaattacactacaacggcagatctgaaagacttcgagaaaagactgcgc
acatttagaggcatagccagtcattacaacatggtggtgttgatggagacggtggattgg
atcatcaaaatgaacccaagtatatcaagctga

DBGET integrated database retrieval system