Argopecten irradians (bay scallop): 138318040
Help
Entry
138318040 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL-like
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03460
Fanconi anemia pathway
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138318040
09124 Replication and repair
03460 Fanconi anemia pathway
138318040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138318040
03400 DNA repair and recombination proteins [BR:
airr03400
]
138318040
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138318040
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138318040
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
138318040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
adh_short
FANCL_d3
adh_short_C2
FANCL_C
FANCL_d1
FANCL_d2
KR
zf-RING_2
SLX1_C
Ac81
Epimerase
zf-rbx1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
138318040
NCBI-ProteinID:
XP_069116190
LinkDB
All DBs
Position
3:26983936..27034166
Genome browser
AA seq
680 aa
AA seq
DB search
MDMLRNFPGLIPVNKQASIYTGYINICNEDFKIHVELPDKNKLEDLQFSCDWKLQYLLHD
YTAILQQRLKQCSSLCQYLLEVKSLVERQLEGRQQIQQGGSQVCAQLLGEVEHLGWDKLV
SIDAKFQTLELQCNDKKGRQHILKVTLSPQHPRIAPKCVVDLPGQFHVQWKSTSDLQWLY
QQFELAVDMYQDFIDVMEELDKKTWILEPENPVYSATYRRIAVSPNVSIQISVDYRHPRM
LPECRFLGADQAVVPLRESLNSNLHLWDEQKGLLENLQILLGTELPSPSTSTKEEFSVEC
GICYAYRLDTELPNQACSDVRCGQPFHQTCLYEWLRALPSSRQSFNTIFGECPYCSKMDW
LCFLVFCAVVFLLLQILMLLRSDCDLALKWIHLFGKTPGSLKGKVVWVTGASSGIGEALV
LKLAAVGCRLVLSARREDKLQRLKEQCVDQYGAPEDYLVLPLDLLDYNSHKGLVDTVLKY
FKKIDCLVNNAGRSQRAVISKTSFTVDQQMLAVNTLGPISLTKAVLPVFIRQNSGHVVVT
SSVAGKIGAPGLGSYCASKHALHGWFDCLRVESVMHNIQVTMACPGPVFSEALIHAFTED
PKKNLGVEMKPEEKRMTAARCAHLMAVAMANNMDEVWLTANPELSFLYMNQYLPGIFHWL
AKRFGQKRFRKVLEGSSDLH
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggacatgctgaggaattttccaggattaattccagtgaataagcaagcttccatctac
actggctacatcaatatctgtaatgaagattttaaaatccatgttgaattacctgataag
aataaattagaagacctccaattttcctgtgactggaaactgcagtacttacttcatgac
tacacagctatcttacaacagaggctgaagcagtgcagctccctgtgccagtacttactt
gaggttaaaagtttggtggaaagacaattagaagggagacaacaaatccagcagggagga
agccaggtgtgtgcacaactcctgggggaagtggaacacctgggatgggacaagttagtg
tctattgatgccaagttccaaactcttgagcttcaatgtaatgacaagaagggaagacag
cacatactaaaggtcacacttagtccacagcatcctcgtatcgccccaaaatgtgtagtg
gacctacctggccaattccatgtacaatggaaatcaacgagtgacctacaatggttgtac
caacaatttgagctggctgtggacatgtatcaggactttatagacgtgatggaagagtta
gataagaaaacgtggatactggagccggagaatcctgtgtacagtgccacctataggagg
attgcagtgtcgcccaatgtgtccatacaaatcagtgttgactaccgccaccccaggatg
ttaccggaatgtagatttttaggggctgatcaagctgttgttccattgcgagagagcctc
aactcaaacctccatctatgggatgaacagaaaggactgttggaaaacctacaaatatta
ctgggaacagagttaccttctccttccacgtctacaaaagaggaatttagtgtggagtgt
gggatatgttatgcctatagacttgatacagagcttcctaatcaagcttgtagtgatgta
agatgtggacaaccattccaccaaacctgtctgtatgagtggctgagagccttgccttcc
agtagacaaagcttcaacaccatatttggggagtgcccttactgtagtaagatggactgg
ctgtgtttcctggttttctgtgctgtggttttcctgctgttacaaatcctcatgcttcta
aggtcagactgtgacctagcacttaaatggatacatctatttggaaaaactccaggaagt
ctgaaaggcaaggtggtatgggtgaccggagcctctagtggaattggtgaggccttagtc
ttaaaactggctgctgttgggtgtcgtctagtactgtcagcccgacgagaggacaaactt
cagaggctcaaagaacaatgtgtagatcagtatggtgccccagaggattaccttgtccta
cccctagatttactggactacaactcacacaaaggtttggtggacactgtactcaaatat
ttcaaaaagatagactgtcttgtgaacaatgcaggtcggtcacagagggctgtgattagc
aagaccagttttactgttgaccaacagatgctagcggtcaacactttaggtccgatatca
ttgacaaaggcagtccttccagtattcattagacagaattctggccatgtggtggtcact
agtagtgtggcaggtaaaattggtgcaccaggccttggctcatactgtgccagcaagcat
gcacttcatggatggtttgactgtctacgtgttgagtctgtcatgcacaatatacaggtg
acaatggcctgtcccggtcctgtattctcagaagctttgattcatgccttcactgaggat
cccaaaaagaacttaggtgtggagatgaagccagaggagaagaggatgacagcagcccgc
tgtgctcacttaatggctgtcgctatggcaaacaatatggatgaagtctggcttacagcc
aatccggagttatctttcctttatatgaaccagtacctacctgggatatttcattggtta
gctaaacgttttggacagaagagattcagaaaggtattagaaggaagttcagacctccat
taa
DBGET
integrated database retrieval system
