Argopecten irradians (bay scallop): 138318053
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Entry
138318053 CDS
T10542
Name
(RefSeq) protein transport protein Sec23A-like isoform X1
KO
K14006
protein transport protein SEC23
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138318053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138318053
Membrane trafficking [BR:
airr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
138318053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
138318053
NCBI-ProteinID:
XP_069116208
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All DBs
Position
3:27335290..27350674
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AA seq
784 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNVWPSSRLEATRMVAPLGCLYTPIKERAELPPVLYDPVL
CTRPTCRAVLNPFCQVDYRAKIWACNFCYQRNPFPPQYAAISEQHQPAEIIPQFSSIEYT
ITRATCHPPVYLIVLDTCMDEEDLQAVKESLQMSLSLLPPNALIGLITFGKMVQVHELGC
EGCSKSYVFRGTKDLSAKQIQEMLGIGKGHAPQQPKGPHNPQQQQQQLPSNRFLQPVHKC
DMSLTDLLGELQRDPWPVAQGKRPLRSTGVALSIAVGLLECTFPNTGARIMLFLGGPCTQ
GPGMVVGDELKFPIRSHHVIEKDNCKYMKKAMKHYEALANRAANNGHVVDVFSCALDQTG
LYEIKFCPRYTCGHMVMGDSFNTSLFKQTFQRVFSKDGQGEFKMAFGATVEVKTSRELKV
SGAIGPCVSLGVKGPAVSDTELGLGGTCQWKLCGLYPSTTLAYFFEVVNQHNAPIPQGGR
GYIQFITQYQHSSGQRRVRVTTLARNWADASTNIQHISAGFDQEAAAVLMARIAVFRAET
DDGPDVLRWLDRMLIRLCQKFGDYHKDDPNSFRFSENFSLYPQFMFHLRRSQFLQVFNNS
PDETSYYRHMLNAEDLTQSLIMIQPILYAYSFSGTPEPVLLDTSSIQADRILLMDTFFHI
VIYHGETIALWREQKYQDQPEYENFKQLLQAPVDDAQEILQTRFPMPRYIDTKHEGSQSR
FLLSRVNPSQTHNNAFGWGQVATSIISTGGPTSEDGSGAAVLTDDVSLQVFMEHLKKLAV
SSSS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatatcaagagttcatacaacagaatgaggacagagatggagtacggttcagc
tggaatgtttggccatctagcagactggaggctacaagaatggtagctcccttgggatgt
ctgtatacaccaatcaaagagcgagcagaattgcctcctgtcctgtacgaccctgtgctt
tgcaccagacccacatgccgggcagttctcaatcctttctgtcaagtggattacagagca
aaaatatgggcttgtaacttctgttaccagaggaatccgtttccacctcagtatgctgct
atctcagaacaacatcaaccagcagagatcatacctcaattctcatctatagagtatacc
atcacaagagcaacatgccaccctccagtctatctgatcgtactggacacatgtatggat
gaagaagaccttcaagcagtcaaggagtctcttcaaatgtcactgagtttgctgcctcca
aatgcactgattggtctcatcacatttgggaaaatggtccaggtgcatgagttaggatgt
gaaggatgttctaaaagttatgtgttcagagggacaaaggatctttctgcaaaacaaata
caggaaatgctgggtataggtaaaggccatgcaccacagcagcctaagggaccacataac
ccacagcagcagcagcaacaattgccctctaacaggtttctacaacctgtacacaagtgt
gatatgagtctgacagatcttctgggagaattacaacgagacccctggccagtagctcaa
ggaaaacgacccctccgatcgaccggtgtcgctctgtcaattgctgtgggcttactagag
tgtacgttccctaacaccggagccagaatcatgttgtttttaggtggaccctgtacccag
ggaccaggaatggtggtcggagatgaactcaagtttccgatcaggtctcaccatgttatt
gagaaggacaactgcaagtacatgaagaaggctatgaagcactatgaagcactggccaat
agagcagctaacaatggtcatgtggtagatgtgttctcctgtgctctggaccagacgggg
ttatacgagataaagttctgtcctcgatacacatgtggccatatggtgatgggagattct
ttcaacacatcactcttcaaacaaacctttcaaagagtcttctctaaagatggacaagga
gagttcaaaatggcatttggtgcaacagtggaagtcaagacttcgagagagttgaaggta
tctggtgcgattggtccatgtgtatccctgggtgtaaagggacctgctgtgtccgacaca
gagctaggtctgggtggaacctgtcagtggaagttgtgtggtctctatcccagtaccact
ctggcctacttctttgaagtggttaaccagcataatgcccctataccgcaaggtggacga
ggctacatacaatttatcacacagtatcaacactccagtggtcagcggagggtcagagtg
accactctggctaggaattgggctgatgccagtacgaatatccagcatatatcagctggg
tttgaccaggaggctgcagcagtactgatggccagaatagcagtgttccgagctgagacg
gacgatggtccagatgtactgagatggcttgacagaatgctgatcagactgtgtcaaaag
tttggagattaccataaagatgatccaaattccttccggttctcagaaaacttttctctt
tacccacaatttatgttccatttacgaagatcacagtttttacaagttttcaacaacagc
cccgatgaaacctcatattacagacacatgttgaatgcagaagatctgactcagtcactg
atcatgatacagcctatattatatgcctactctttcagtggcacgcctgagccagtacta
ctagacacaagcagtatacaggctgacagaattctattgatggacacattcttccatata
gttatataccacggagagacgatagcactttggagagaacagaaatatcaggatcaacca
gagtatgaaaacttcaaacaactactacaagctcctgtggacgatgcccaggaaatccta
cagacacgcttccctatgccacgatatatcgacactaaacacgagggctcacagtctcgt
ttcctgctctcccgagttaatccatcacagacacacaataatgccttcggatggggacag
gttgctacttcgataataagcactggtggtcctacctctgaggatggaagtggggctgca
gtactgacagatgatgtgagtttacaagtattcatggaacatctcaaaaagctagctgtg
tctagttcttcctga
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