Argopecten irradians (bay scallop): 138318136
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Entry
138318136 CDS
T10542
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
airr03009
]
138318136
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138318136
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
90S particles
Helicases
138318136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
TrwB_AAD_bind
SR-25
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
138318136
NCBI-ProteinID:
XP_069116361
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All DBs
Position
3:29289373..29304473
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AA seq
654 aa
AA seq
DB search
MDGFDLFKKLGVGVKFDIQRFQKDAERFKLTRPAQQQQKQVENNHTSAIKRKALQNTDQR
KKKIKESESDDSSDADDSNPEHDLYSGDEYSSDASSNNEEEEEPELQLLGNIKSQNGKIP
HQQNKKKKKAKDRSLEKMAQIQTEQLNHVKNKHRIHTHGTDVPRLLETFDQLTHEYNVHP
QLVQNIRSAGYDLPTPIQMQAIPVMLHRRELMACAPTGSGKTAAFIIPILHHLKEPRNQG
FRALVLAPTRELAKQTYRECQKLSEGRGFRIHYIEKASTAIKKFGPKSSQKFDILVSTPN
RLVYMLKQDCLRLNSVEWLVVDESDKLFEEGKTGFRDQLAEIYKACDGRNLRRAMFSATF
AFDVEEWCKLNLDNVIQAYIGAKNSATETIQQELKFVGTESGKLFAIREIIQQGIEPPVL
VFVQSKDRAKQLFRELIYDGINVDAIHSDRTQLQRDNVVKSFRAGKIWIMICTELMGRGI
DFKGVNLVINYDFPNSAISYIHRIGRTGRAGRPGRAVTFFTEDDVVNIRSIANIMNEAGC
PVPDYMLQIKRLNKKKRKKLSKRVPRRDCISTNLKARRVQAVINERMKKKTDKNSKKRKS
PGDQSDGEDAVEDLSQVSQIDSSSEGVRKKKNKKDRSKIHTKTKKKKMVGKTVK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggatgggtttgatttgttcaaaaaacttggcgttggtgtaaaatttgatattcaaagg
tttcagaaagatgctgaacgctttaagttgacacgtccagcacaacaacaacaaaaacaa
gtcgaaaataaccatacttcagctataaaaaggaaagctttgcagaacacagatcaaaga
aagaagaaaatcaaagaaagtgaatctgatgactccagtgatgcagatgactcgaatcca
gaacatgatttatattcaggagatgaatattcatctgatgcttcctctaataatgaggaa
gaggaagaaccagaattacaattacttggaaacataaaatcacaaaatggaaaaatccca
caccaacaaaacaagaagaagaagaaagcaaaggatcgttctttagagaaaatggcacag
atacaaacagaacagttgaaccacgttaaaaacaaacacaggatccacacccatgggaca
gatgttcctcgcctcctggagaccttcgatcagcttacacatgaatacaatgtccaccct
caactggtccagaatattagatcagcgggttacgacctccccactcccatacagatgcaa
gccatccctgtcatgctacatagaagggagttaatggcttgtgctcccacaggatcaggg
aagactgcagcttttattatccctattctccaccaccttaaggagcctcgaaaccaggga
tttagggctctggtactggccccaactagggagctggctaaacagacatatagagaatgt
cagaagctttcagagggaagaggattcaggatccattatattgagaaagcaagcacggct
ataaagaagtttggaccaaaatcatctcagaagtttgatatccttgtatccacacccaac
agactggtgtatatgctgaaacaagactgcttacggcttaacagtgttgagtggctggtt
gtcgatgagtctgataaattgtttgaagaaggaaagacaggattcagagatcagttagct
gagatctacaaagcttgtgacggtcggaatctgcggcgtgccatgttcagtgctacattt
gcttttgatgtggaggaatggtgcaaattgaacctggacaacgtcatacaggcttatata
ggagctaaaaattcagcaacagaaactatacaacaggagttgaagtttgtaggaacagaa
tcaggaaagctgtttgctatcagagaaatcatacaacagggtatagaacctcctgtgttg
gtgtttgtccaatcaaaggaccgagccaagcaattgttccgtgaactcatctatgatggc
atcaatgttgatgctatacattcagacaggactcaactacagagagacaatgtcgtgaag
agtttccgggctggaaagatctggatcatgatctgtacggaactgatgggccgtggaata
gacttcaaaggagttaacctcgtcatcaactacgacttcccaaacagtgcaatcagctac
atacacagaattggtaggacaggtcgtgccggcagaccaggaagagccgtgaccttcttc
accgaggatgatgtagtcaacatccgcagtattgccaacatcatgaatgaagctggatgt
cccgtccccgactacatgttacaaatcaaacgtctgaacaaaaaaaagagaaagaagctg
tccaagagagtacctcggagggattgtatctctaccaacctcaaagccaggcgtgtacag
gcagttatcaacgagaggatgaaaaagaagacagataaaaactccaagaaaaggaaatca
cccggagaccagtctgacggggaagatgctgtagaggatctctcacaggtgtctcaaata
gactctagtagtgaaggagtgaggaagaagaagaataagaaagacagatctaaaattcac
acaaaaacgaaaaagaagaaaatggtggggaagactgtgaagtga
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