Argopecten irradians (bay scallop): 138318468
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Entry
138318468 CDS
T10542
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03008
Ribosome biogenesis in eukaryotes
airr03013
Nucleocytoplasmic transport
airr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138318468
03015 mRNA surveillance pathway
138318468
03008 Ribosome biogenesis in eukaryotes
138318468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138318468
03009 Ribosome biogenesis [BR:
airr03009
]
138318468
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138318468
mRNA cycle factors
Stress granule specific factors
138318468
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138318468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_9
UBA_4
Motif
Other DBs
NCBI-GeneID:
138318468
NCBI-ProteinID:
XP_069116938
LinkDB
All DBs
Position
3:37660298..37687696
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AA seq
686 aa
AA seq
DB search
MSSGLSWKTGRDGRRNFGDHDDRWVDKDNNNDNGGGRGRGGGKFSSNRGRSRSRGFGGFY
TRGSRGGSSYNKYSSNNRSYNNRGNNRGGSRGNYRGGGGSGAGPRDRLDSEGDCDMDNDG
TGSSTRYSPYGRPDRRGSRNSRGDYSIKADSRRGGGSGYSNSGGRYYNDGPQWYKVTIPK
GKKSDKAVLLRLINENIPTPFIPQYFHFEQDSAVFHIQDKEAADAIRSQSQRHTLPNGFK
MIILVKPSSPPANYMDKETVEKLKAAMSRRYDSSAKMLDLSNLYQDSEMSQENLRLPLGR
PNVMTQVVTIIEENIPELEGLDISNNRLISLEHLSKLTKICPNIVRINLGKNSVRHLDEL
DKVKDWKLMELMLDGNELCDKFEDQAAYISAVRKKFPKVMKLDGHDLPPPITFDLETNTE
LPETKGSFFFNPEIQEVLVKFLKEFFTIYDSDNRQPLTAAYQEDAIFSLSASKNNSSDHW
QPELQIYIPESRNLMRKSRDPSQKQRVLMRGKLNVVSKLCLLPKTTHDYNSFVVDVDHVS
STLLSFTVNGVFKEADERSDRQPVRAFSRRFIALPRGQGMVIANDMLTVTNASPSQAQAA
FKNPAPTPSSSPVPDTTPVAPFHQAAGPSLTPEQQQMVQSFSAQSQMNLEFSAKCLEEHQ
WNYDVAGQAFLTLQKENKIPPAAFVK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggtttgtcatggaaaactggacgagacggtcgcagaaactttggagatcat
gatgacaggtgggtagacaaagacaacaacaatgataatggtggtggaagaggaagggga
ggaggcaaattcagtagtaacagaggcaggagtcgaagtcggggatttggaggtttttac
acacgaggcagtcgtggtggtagcagctataacaagtacagctcaaacaaccggtcctac
aacaacagaggcaacaatcgtggaggttcaagggggaactaccgagggggaggtggaagt
ggggcaggcccccgagaccgtctagacagtgaaggagactgtgatatggacaacgatgga
acaggatcttcaactagatactctccatatggtcgacctgaccgacgtggctccagaaat
tctaggggagattattccattaaagcagactcgagacgaggaggcggtagtggatattca
aatagtgggggaagatattataacgatgggcctcagtggtacaaagttacgataccaaaa
ggaaagaaatcggacaaagctgtgcttcttcggttgataaatgaaaatataccaacacca
tttataccacaatatttccactttgaacaagacagtgctgtgtttcacatacaagataaa
gaagcagcggatgctatccgctcccagagtcagagacatacactgcccaatggattcaag
atgattatccttgtaaaaccttcctcgccgccagctaattacatggacaaagagacagta
gaaaaactaaaggcggccatgagtagaagatatgactccagtgccaagatgttagatctc
agtaacctatatcaggactcagaaatgtcccaagaaaatttacgcttaccactcggccga
ccaaacgtcatgacacaagttgtcacgataatcgaagaaaatatccctgagttggaggga
cttgatatcagcaataacagattgatctcattggagcacctatctaagttgacaaagata
tgtccaaatattgtccgtatcaaccttggcaagaatagtgtgcgacatctggatgaactt
gacaaagtgaaggactggaaactgatggagctgatgttggacggaaatgaactttgtgat
aagtttgaagaccaagccgcctacattagcgctgtacggaagaaattccccaaggttatg
aagttggatggacatgacctgccacccccaataacctttgaccttgagacaaatacagaa
ttaccagaaaccaaaggtagctttttcttcaatcctgaaatccaggaagttttggtaaag
ttcctgaaagagtttttcaccatatatgactctgacaatcgccagccactaacagcagct
taccaggaggatgcaatcttttctttgtcagcttccaagaacaattcttcagaccactgg
cagccagaactccagatatacattcctgagagtaggaatttgatgcggaaatcacgagat
ccaagtcagaagcaacgagtcttgatgcgaggcaaactgaacgttgtgtcaaaactctgt
ctgctaccgaaaactacacatgactacaactcttttgtagtggacgtcgaccatgtttct
tcaactctcctcagtttcacagtaaatggtgtgtttaaagaagctgatgaacgttcagac
cgacaacctgtgagggccttcagtcgacgattcatagccctccccaggggccagggtatg
gtgatcgccaacgatatgctgacagttacaaatgcttcgcccagtcaagcacaggctgcc
tttaagaaccctgcgccaaccccctcgtcgagtccagtacctgataccacccctgtggct
ccattccaccaggcagcggggcccagtctcaccccagaacaacaacagatggtccagagc
ttctctgctcagtcacagatgaatttggagttttcagccaagtgcctagaggagcatcag
tggaattatgatgtagcaggtcaagctttcctcacactacagaaagaaaacaagatcccc
cctgcggcatttgtgaaatga
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