Argopecten irradians (bay scallop): 138319100
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Entry
138319100 CDS
T10542
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138319100
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
airr04812
]
138319100
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
138319100
Membrane trafficking [BR:
airr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
138319100
Cytoskeleton proteins [BR:
airr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
138319100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
TIP49
AAA_5
MIT
Mg_chelatase
AAA_16
IstB_IS21
AAA_14
DUF815
AAA_2
NPHP3_N
RNA_helicase
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
138319100
NCBI-ProteinID:
XP_069118121
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All DBs
Position
3:complement(54581099..54613848)
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AA seq
623 aa
AA seq
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MHRRGNGRFWGRKRGDRGKGPPRDRPTFHSRNVYIVAAPLLFIFAILRIIAYQLWVVLEI
LVGRSKAILPSACLPNQKSKYKCQSEAEEGMSGAAKASVGPAAPALATQKHHHRKAFEYI
SKALKIDEEDSGRKEQAIEMYKKGIAELEKGIAVNVGQGQGDHWDKARRLQQKMMTNMVM
AQDRLDILDKMLHSLAVTPVPTDGATCLPNPSETKEKTLPFPNANSTDTKSTVRARKPIG
KDVPKSNNKSKSDESTASSKMWKPMKQPLAVHKSNTLPRNSRPASTGGSSSATSSPARKF
SHQRQHSQQNPGARPKKDLSSLKLKNIDKKLAETIINEIVDTGPPVQFKDIAGQDTAKQA
LHEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVANESNATFFNISASSLTS
KWVGEGEKLVRTMFTLARELQPSVVFMDEIDSLLCERREGENDASRRLKTEFLVQFDGVA
GSSDDRVLIMGATNRPQELDDAVLRRFAKRVYVNMPGKETRKSMLTQLLAKHSNPLTSDE
LSEVARLTEGYSGSDLNALAKDAALGPIRDLSATEVKTVDANKVRGIKYSDFMESIRRIR
KSVPADTLSKYEHWNQEYGALGV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggcggggaaatggaaggttttggggtagaaaaagaggcgataggggcaaagga
ccgccaagagaccgaccaacatttcatagcagaaacgtttatattgtagcagctccactt
ttatttatctttgctattcttcgaattattgcctatcaattgtgggtcgttttggagatt
ctcgttggaagatctaaagcaatactgccttcggcatgtctaccaaaccaaaagtcaaaa
tacaaatgccaatctgaagctgaagaaggcatgtcgggggctgccaaagcgagcgttggt
cccgcggccccggccctggccacgcagaagcaccaccacaggaaggcattcgagtacatt
tccaaggccctgaaaatcgacgaggaagattcagggaggaaagaacaggccattgagatg
tacaagaaaggcatagcagagctggaaaagggtatagctgtcaatgtgggccaaggtcaa
ggtgaccactgggataaagctcgtcgcctacaacagaagatgatgaccaacatggtgatg
gcccaggacagactggacattctagataagatgctacattccttagctgttactcccgtc
cctactgatggtgctacatgtttaccaaatccgtccgaaacaaaggaaaaaacacttccc
ttccctaatgccaacagcacagacacaaaatccactgtgcgtgcccggaaacctatcgga
aaagatgttccaaaaagcaataataagtctaaatcagacgaatccacagcttccagtaag
atgtggaagcctatgaaacagcctctggcagtacacaagagtaacaccctcccccgtaac
agtcggccggccagtacaggaggctcctcctcagccacctcctccccagctcgcaagttc
tctcaccaaaggcagcactcacaacagaatccaggagcccgtcctaaaaaggacttgtct
tctctgaagttgaagaacatagacaaaaagcttgctgagacaatcataaatgagatagta
gacactggtcccccggtacaattcaaggacatcgctggtcaggacacagcaaaacaagct
ttacatgaaattgtgatactccctgccttacgaccagagttattcaccggtttgcgggca
ccagcaaggggcttattgttgtttggtcctccagggaatgggaaaactatgttggctaag
gcagtggccaatgagtccaatgctacattcttcaacattagtgcctcaagtctcacatcc
aaatgggtaggggaaggagagaagttggtgaggactatgtttaccctggcccgagaactc
cagccttctgttgtgtttatggatgaaattgattctttgctttgtgaaagacgagaagga
gaaaatgatgctagtcgacgattgaagacagagtttctagtgcagtttgatggggtggcc
ggaagttcggacgacagggtgttgataatgggagccaccaatagaccacaggaattggat
gatgctgtactgagacggtttgctaagagagtgtatgtaaatatgcctggaaaagagaca
cggaagtctatgcttacacagctactagccaagcacagtaacccactgaccagtgatgag
ctgtctgaggtagcaaggttaacagaagggtactctggtagtgacctcaatgccttggct
aaagatgcagcactgggacctatcagggatttatcagctacagaggtcaagactgtggat
gcaaataaggttaggggtataaagtacagtgattttatggagtctataaggagaatcagg
aagagtgtgcctgccgacacgttatccaagtatgaacattggaaccaggagtatggagcc
ctgggggtgtga
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