Argopecten irradians (bay scallop): 138320475
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Entry
138320475 CDS
T10542
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
airr03036
]
138320475
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
airr04812
]
138320475
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
138320475
Cytoskeleton proteins [BR:
airr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
138320475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
CEP104-like_TOG
TOR1L1_N
Cnd1
HEAT_EZ
HEAT_DAAF5
UTP20
HEAT_2
PDS5
RTP1_C1
Tti2
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
138320475
NCBI-ProteinID:
XP_069119539
LinkDB
All DBs
Position
4:complement(7171225..7305050)
Genome browser
AA seq
1460 aa
AA seq
DB search
MATLDDFLPNVTTQDTRKRIQAHGDLIPFLSDPHSSLNCSDIDELINGLVGWVNSSNYKV
SVNGLEVLCLMVDRMGEDFKHYVSHVLPSVVDRLGDSKDQVRDQAQQLLMKLMMPATSPG
YVFERIMSAFTHKLWHVREGVLICLQNTLNTYGARCLHLSKIVPNICKLLDDQNSQVRET
SIATLAEIYRHVGEKVRSDLLKKGISQQRLNQIFARFDEVKMSGNMLATAHDYAPSRGGT
DDELDFGRPSSYRSGQTKRTASSSSVPRAPSRGPSDCDDNEFARPLSTKVPQAKKSSGLA
SGRKTPSASAVTLRRRRSISSTGASGAGGVDEDYFIKSFEDVPKVQLFSSRDLNDQITKI
KDLLSDPNSAWEKRLDMMKNLRGVMIAGGAQHDDFHSLLRTLEPCMSMAVKDLRSQIVRE
ACVTLAYLSQQLGNRFDHFGETQLPNLIPLIPNSAKVMASSGIICIRFIIQYTHSYRLIP
IITGNLTSKSNIIRRFCCEIINQILHNWPTHVLEKHIANLQDAIKRGINDPDSDARAFSR
KAFWGFAEHFKDQADALLNALEPAKQKMLQGELSGSSSNNSLNSAEGLRIKSRPRSASQD
RGFDSSTLGRIGKKKHSRVSSARSDTGAADLDTPIRSKSSNTPKDRMMRSSSAIDLANGR
TSPSPYGRTSPSPYGRTSPGPYSIAATSSGYATYTPRRRTAAQTAALSRMTAGATSSLPR
QKSSASNVISPPERSRARGRTTTSSQSQPNSRSGSPSSRLSYLTHTTGRAESTMTPGRPR
RSGMVRSQGASREGSPTRMNLQPGRERRLSGSKLSTSKGAKGNVMAQRLLRPGAELEDAM
ADALHKGPMRRRYDTYDSDDAASETSSVCSERSYSSLGRTSEASSTEFDKWYYRLPTPTQ
DTAEIITLIGSGSYTDRKEGLIALQHLLRAHRYLNRVELRKVTEVFARMFHDPHSKVMSL
FLDTLVDLMNVHSRDLTDQLYMIMTRLLMKTGADMLGSVHAKVTRALDGVRENFPCDQQF
GILTKLLIDQTQSPNLKVKTTILHYMHGLVGDMDPSDFMNSTDTRLALSRIINFTTEPKS
ADVRKGAQAVLIALFNLNPPEFSVMLSLLPKAFQDSATKILHNHIRTASHGHESDVLSPR
NVTSPPKNRSRPPSRSGHRDEAETENMNPEDIYDSIKKTSADIQNLSFNSKLENYEDVRK
KREFTSQDSGIQDLRNDSPDAVDTRKGQYNPSHYQDEGTLNGYNKSRLADTEFDDSEMFN
EDPWKALLGISDTSTDECSENDIISDILTELSNHNERNDERKNAMLSLIKLTREGTFGLW
DEHFKTILLILLETLGDNDGQVRALALRVLREILRNQPQRFRDYAELTTLRILEAHKDSV
REVVRSAEECADTLANYIPPEQSVRILNPIIQTAQFPINLAAIKMQNKVIELLPKEAVES
MMGDMIPGLLRVRIRFSSFI
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggatgatttcttgcctaatgtaacgacacaggataccagaaaacggata
caggcccatggcgatctcattccgtttctgagtgaccctcacagctctctgaattgtagt
gatattgatgagttgattaacggactggtaggatgggtcaacagcagcaattacaaggtg
tctgtcaatggactagaggtcctgtgtttgatggtggaccgtatgggagaggacttcaaa
cattatgtatctcatgtgcttccgtcagtggtagatcgcctgggagattccaaagaccag
gtacgagatcaagcccagcagttactgatgaagctgatgatgccagccacatcccccggg
tatgtgtttgagaggattatgagcgcctttacacacaaactgtggcatgtccgggaggga
gttctaatctgcctacagaacacactcaacacgtatggagccaggtgcctacacctgtcc
aagatcgtccctaacatatgtaaactactggacgatcagaatagccaggttcgggagaca
tcaatagccacactagccgagatataccgtcatgttggggaaaaggtacgctcggattta
ctgaagaaaggcatctcacagcagaggttaaatcagatattcgccagatttgacgaagtg
aagatgtcgggaaatatgcttgccacagctcatgactatgcacccagccggggaggtact
gatgatgagcttgactttggccgaccatcctcctatcgtagcggccagaccaagcgaacc
gcaagctcctcctccgtacccagagctcctagcagagggccctcagactgtgacgataat
gagtttgcacgacccctgtccaccaaagtgccccaggctaagaagagcagcggcctggcg
tccgggaggaaaacccccagtgcctcagcggttactctgcgacgtcgacgatccatatct
agcacaggggcctccggtgccggtggggttgatgaggactatttcatcaagtcctttgag
gatgtgcccaaagtacagctgttttcttcccgagatctcaatgatcagataacaaagatc
aaagacctgctctctgatccgaactctgcctgggagaaacgtttagatatgatgaagaac
ttacgaggagtaatgattgcgggaggtgcccaacatgatgatttccattccctgctgagg
acgttagaaccttgtatgtctatggcagtgaaggatctccgctctcagattgtacgcgag
gcctgtgttacgttagcatacctgtctcaacagttaggcaatagatttgatcattttggg
gagacacagttgcccaatctcatccctctcattcccaacagtgccaaagtgatggcctcg
tctggaattatctgtatccgctttatcatacagtacacacattcttataggctgattcca
atcataactggaaatctgacttcaaaatcaaatattatccgcaggttttgctgtgagatt
ataaaccaaatcctacataattggcccacacatgtcttagagaaacacatagctaaccta
caggatgccatcaaacgaggaatcaatgatccagatagcgatgctagggccttctcgcgc
aaagctttctggggctttgctgagcactttaaggaccaggctgatgcactcctgaatgcc
ctggagccagccaaacagaagatgttacaaggggagctaagtggctcctccagtaataac
tcgttaaatagtgctgagggattacgtatcaagtcgcggccacgatcagccagtcaggac
cgtggctttgattccagcacactcgggcggattgggaagaagaagcattctagagtaagc
tcggctcgcagtgacacaggggcagctgaccttgacactccaatacgcagtaagtcgtcc
aatacgcctaaagacagaatgatgaggtcaagcagtgccattgacctagccaatggacgt
acaagtccaagtccgtatggacgtacatctccgagtccatatgggcgcacgagtcccggt
ccatactcaatcgcagcaacaagttcaggatatgcaacgtatacgccacggcgccgcaca
gcggcacaaactgccgctctgtcacggatgacagctggtgccacaagttctcttccccgt
caaaaaagctcagcttcaaatgtgatatctcctccggagcgaagtcgagcccgcggacga
accacaacctcatcgcaatctcaacccaatagtcgctccgggtctccctcgtcacgtcta
agttatcttacacacaccacaggccgtgccgagtcaaccatgacccctggacgtccccgc
cggtcgggaatggtcaggagtcagggggccagtcgagagggtagcccaacccgcatgaac
cttcaaccaggccgtgagaggagattgagtggcagcaagctgtctacaagtaaaggtgcc
aaaggcaatgtgatggcccagagattgttacgaccgggagctgagctggaagatgctatg
gctgatgctctgcacaaaggtccaatgcgaagacgttacgacacttacgactcagatgac
gcggccagtgaaacgtctagtgtgtgttcggagaggtcctacagctcacttggacgaaca
tcagaggcgtcctccactgagtttgacaaatggtactatcgactcccgacacccacacag
gacacagctgaaatcatcaccctcataggaagtggttcttatacagataggaaggaagga
ctcatagctctacagcatctgcttagagctcaccgttacctaaatcgtgtggagctaaga
aaagtgaccgaagtttttgccagaatgttccacgatcctcacagcaaagtgatgagtcta
tttttagacacacttgtagatctgatgaatgtccactctcgggacctgactgaccagctg
tatatgataatgacacgccttctcatgaagactggtgctgacatgttgggctctgtccat
gccaaggtcacacgggcgctggatggggtcagagaaaactttccatgtgatcaacagttc
ggaattttaacaaagctactcatcgatcaaactcagtctcccaacttaaaggttaagacg
actatccttcattacatgcatggcctcgtaggtgacatggatccgtccgacttcatgaat
tccaccgacacacgcctcgctttatctcgaattatcaactttaccacagaaccaaagagt
gctgatgtccgaaagggggcacaagctgttctcatagcattgttcaacttaaaccctcct
gaattctctgtcatgttgtcactgctacctaaagcattccaggatagtgccacaaagatc
ttacataaccatatacgtactgcgagtcacggccacgagagtgatgtgctgtctccgagg
aatgtcaccagtcctcccaaaaacaggagtcgacctccatcaaggagtggacaccgagat
gaagcagagacagagaatatgaatcccgaggatatttatgattccattaaaaagacttct
gctgatattcagaatcttagttttaatagtaaattagaaaattatgaggatgttcggaag
aaaagagaattcacatctcaagatagtggtattcaggatttacgcaatgacagtccggac
gctgtggacaccagaaagggccaatacaacccgtcccactaccaggacgagggtacatta
aatggttataacaaatcccgattagcagatacagaatttgacgacagtgagatgtttaat
gaagatccatggaaagcattgcttggtatatctgataccagcacagatgaatgctcagag
aatgatattatatctgatatcctcacagaattgtctaatcataatgaaagaaacgacgag
cgtaaaaatgccatgctgtctctgatcaaacttactagagaaggaacgtttggactgtgg
gatgaacactttaaaacgattcttcttattttactggagacacttggagataatgatgga
caggtgcgagcgttagcattacgggtattaagagaaattttacggaatcagccacagaga
tttagagattacgctgagctgacaactctacgaattttagaggcacacaaagactctgtt
agagaggtggtgcggtctgcggaggaatgtgcggacacgttagccaactacatccctcct
gagcagagtgtgcgcatcctcaacccaatcatacagacggcacaattccccattaatcta
gccgctattaaaatgcagaacaaggtgatagaactgttacctaaggaggcggtagagtcg
atgatgggcgacatgataccaggccttctcagggtacgtatcaggttcagttcgtttata
tag
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integrated database retrieval system
