Argopecten irradians (bay scallop): 138320503
Help
Entry
138320503 CDS
T10542
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
airr01002
]
138320503
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
airr00536
]
138320503
Peptidases and inhibitors [BR:
airr01002
]
Cysteine peptidases
Family C46: hedgehog family
138320503
Glycosaminoglycan binding proteins [BR:
airr00536
]
Heparan sulfate / Heparin
Morphogens
138320503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
LbH_EIF2B
Hint_2
Motif
Other DBs
NCBI-GeneID:
138320503
NCBI-ProteinID:
XP_069119596
LinkDB
All DBs
Position
4:8255051..8349079
Genome browser
AA seq
409 aa
AA seq
DB search
MYSPTYRRFYTGLLVFLLLTGSSLQCGRVVGKRKRPAKMIPLVHKQGVPNLSENTIGASG
LSEGAITRDDPKFKQLVTNDNPNIIFKDEEGNGSDRIMSQRCKDKLNTLAVSVMNTWPNV
KLRVTEAWDEDDHHAKNSLHYEGRAVDITTSDRDRTKYGLLARLAVEAGFDWVYYESRGH
IHCSVKSESSAAIKIGGCFTGSGTVQTPDRGRVLISDIRIGDQVLTMTKDGTLRYSDVIT
FLDRDEQRPGLYYTLFTSDERTITLTDKHLIYSSLSNETALNSFQARYADTVKIGQYVLI
AEKTAMIKPSKIIDIKIGFQDGVYAPLTVEGSIVVDDVVASCYGVINSELIAHAVFAPTR
LLHTISQHISFPWTHSNGSHRHHEGVNWYAEFLYTIGKYVLDKDTLYLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtcctacctatcgcagattttacactggattactcgtcttccttctcctaact
ggctcttcgctacaatgtggccgggtggtcggcaaaaggaaaagacctgcaaaaatgatt
cctttagtccacaaacagggtgtgccgaatttgtcagaaaacacaataggagctagtgga
cttagcgaaggtgcaatcactagggacgacccgaaatttaaacaactggttaccaacgat
aatcccaatatcatattcaaggacgaagaaggcaatggatcggaccgaatcatgtcacag
aggtgtaaagacaaactcaacactttggccgtttctgtaatgaacacgtggccaaatgtg
aaactgcgcgtgaccgaagcttgggatgaagatgaccatcacgctaaaaactccctccac
tacgagggccgagctgtagacattacgacaagcgacagggatcggaccaaatatggactg
ttagcccggcttgctgtcgaggctggatttgattgggtatattacgaatcacgtggccac
attcactgttccgtgaaatcagaatcatccgcggccattaaaattggaggctgtttcacg
ggatcaggcacggtacaaacgccagacagagggcgagttttaatttccgatatcaggatt
ggagaccaagttttgaccatgacaaaggacggaactctccgatacagtgacgtcatcaca
ttcctggaccgggacgaacaacgaccaggcttatactacacattgttcacaagcgacgaa
agaacgataactctcactgataaacatctaatttacagttcgctgtcaaacgaaacagct
cttaattctttccaggcacgatacgccgatactgttaaaatagggcaatatgttttaatt
gccgaaaagacagcaatgataaaaccatcaaaaattattgacataaaaataggttttcaa
gacggtgtgtacgcgcccttgacggtagagggcagcatagtcgtggatgacgttgtagcc
tcgtgctacggtgtgatcaatagtgaacttattgcgcatgcggtgtttgcgccaacgcga
ttgttacatacgatttcacagcacatatcatttccgtggactcattctaatgggagccat
cgccatcacgaaggcgtcaactggtatgcagaattcctctacacaattggcaaatacgtt
ttagacaaagatacgctgtacctggtatag
DBGET
integrated database retrieval system