KEGG   Argopecten irradians (bay scallop): 138320520
Entry
138320520         CDS       T10542                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03410  Base excision repair
Brite
Enzymes [BR:airr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     138320520
DNA repair and recombination proteins [BR:airr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     138320520
SSDB
Other DBs
NCBI-GeneID: 138320520
NCBI-ProteinID: XP_069119638
LinkDB
Position
1:21116783..21134748
AA seq 1031 aa
MLKICRLSRYICWSPALLKSSTGNATSCYTKLISYSKPNKNFLARQLTPWTKPTQPRTQN
FCEMADNRYIIGYAKLGTSGCKGCKTKIEKGSLRIGKVTANPFGGDGDMKQWYHPNCIFN
TFKRARATTKKIEEPDDMEGFSEILQEDKDEINRLIKEHLANAKTPGKKTPSKKATPQKP
AASPVAARSTPSKSFDDDDAAVPSTSSKIPDDNGKRDDAFREFRRLCAEIADESSYNSKT
ALVAKYLKKGASGEGYAGDTYILLKLLLPGVVKRVYNLNNKQLVKLFSQIFGTSLQAMVA
DLDEGDVAETVRIFFEKSKLLLPAKKSTLTLQQVDYFLEELSLVTKEDDQQRILTKIAKR
CTLNDLKMVIRLIKHDLRINAGAKHILEGLDANAYAAFQASRDLHDVVTRVRQNLEEGGG
KPGMAKKLSVRANLMTPVLPMLAEACRSIQFAMKRCPNGFYAEIKYDGERVQLHKKGLQF
SYFSRSLKPVQPHKVEHFKEHIPKAFPSGDDLILDAEVLLVDTTTGKPLPFGTLGVHKKA
QFTDAKVCLFVFDCLHINGENIMDKPIKTRRKILRENMTEIEHRIMFSEMQHIKEPDDLQ
DMMNDVFRQGLEGLVLKDVNGIYEPGKRHWLKIKKDYLEQGTMADSADLVVLGAYFGSGN
KGGIMSIFLFGVHNPDTDQWCTVTKCHSGLDDKTLAELQTKLDMVKISKDARKIPDWLNI
KKQLVPDFVSRDPKKSPVWEIAGAEFTQAEIHTADGISIRFPRITKFRDDKSWKEATNLP
RLKELFKKSKETSDLFPSSKKGKSAVKRKDSQDSDDDDDDDDNSNNSNGHTNGRGSATPV
KGHGSTPRTPVKGQGSETPSTASSGKMGTLMGWVKKGEKRSRSEDSDEASSPKKKMESLS
TKSEGESPSKKSSKPLCKYGKDCYQTNPAHIEQYYHPTDDKLPKPGERLPNVFSGSKIFL
SEDTDNYRLLKRYIIGFDGDLVNDYQKKTATHVIVKPGEAILTSGVCVTVDWLWSSIKKK
TKLPSHKFRVT
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgttaaaaatttgtagattatctagatatatatgctggtcccctgctttgcttaagtca
tcaacaggtaatgcaacgtcatgttatacaaaactgatcagttattctaaaccaaacaag
aattttttggcaagacaactgactccctggaccaaaccaacacagccaagaactcagaac
ttttgtgaaatggcagataatcgatatattattggctatgcaaagcttgggacctcaggg
tgcaagggatgcaagactaagattgaaaagggatccctcaggataggaaaggtcacagcc
aatccctttggtggggatggagacatgaagcagtggtatcatccaaactgtatcttcaac
actttcaaacgagctcgggctacgacaaagaaaatagaggaacccgatgatatggaagga
ttttcagaaattctccaggaagataaagatgaaataaataggctaataaaagaacatctt
gcaaatgcaaaaactccaggcaagaaaactcccagcaagaaagcgacccctcagaagcct
gctgcctcgcctgttgctgccagatctacaccctctaaatcttttgatgacgatgatgct
gcagtgccctcaacatcctctaaaatacctgatgataatgggaagagagatgatgcattc
cgtgaattccgacgtctctgtgctgaaattgcagatgaaagtagctacaattctaagaca
gctttagttgccaaataccttaagaaaggtgcttctggagaaggctatgccggcgacaca
tacatactactgaagctactgctgcctggggtggtgaagcgagtgtacaacctgaataac
aagcaacttgttaagttattcagtcagatatttgggaccagtctgcaggctatggtggct
gatctcgatgagggagatgttgcagagacagtgaggatattttttgagaagagcaaactt
ttgttacctgccaagaaaagcactctaacattacaacaggtggactatttcttggaagaa
ctttcgcttgttacaaaggaagacgaccagcagaggattctcacaaaaatagccaaacgg
tgtacacttaacgatctgaagatggtgatacgtcttatcaaacatgatttgaggattaat
gctggagctaagcacatacttgaaggtttagatgccaacgcctacgcagcattccaggct
tctagagatctccatgatgttgttactcgtgttcgtcaaaacttggaggagggaggtggc
aaaccaggaatggcaaagaaactgagtgtcagggctaacctcatgaccccagtactacct
atgcttgctgaagcttgtcggtccattcagtttgccatgaagcgatgtcctaatggtttc
tatgccgagattaaatatgacggagagagggtacagctgcacaaaaaagggttacaattc
tcctacttcagtcggagtctcaaacctgtacaacctcataaggttgaacactttaaggag
cacattccaaaagcgtttccgtcaggggatgatcttattctggatgccgaggtgttatta
gtagatacgaccactggaaagcccctcccattcggtacccttggcgttcataagaaagct
caattcactgatgccaaggtctgtctgtttgtgtttgattgtcttcacataaatggagaa
aatatcatggacaaacctataaagacccgcaggaaaatcctccgtgagaacatgacagag
atagaacacagaattatgttctcagagatgcaacatatcaaggagccggatgacctacag
gatatgatgaatgatgtattcagacagggattggaaggacttgttctcaaggatgtcaac
ggtatttatgagccaggaaagaggcattggctgaagataaagaaggactacttggaacaa
ggaacaatggctgactctgctgatctagtggtgttaggggcttactttggatcaggaaac
aaaggtggcattatgtcaattttcctgtttggagtacacaaccccgacactgaccagtgg
tgtacggtcactaaatgtcacagtgggctggacgacaagactctggccgaacttcagacc
aagctggatatggtcaaaataagtaaggatgctagaaagattccagactggctcaacatt
aaaaagcagttggttccggactttgtgtcgcgggaccccaagaaatccccggtatgggag
atagctggggcggagttcactcaggccgagatccatacagctgatggtatcagtataagg
ttccctcgaatcaccaaattccgtgatgataaaagctggaaggaggcaactaatttaccg
aggttaaaggaactctttaagaaatcaaaggagacttctgacctgttcccaagtagtaag
aaaggcaaatcggctgtgaagagaaaagatagtcaggacagtgatgatgatgatgatgat
gatgataatagtaataatagtaacggtcacactaatggtcgcgggtcagctaccccagtc
aaaggtcatgggtcaacaccaagaaccccagtcaaaggtcaggggtcagaaaccccctcc
acagcctcgtctggtaagatgggaactttgatgggctgggtcaaaaagggagagaaaagg
tcaaggtcagaggatagtgatgaagcgtcatcccctaaaaagaaaatggaaagtttgtca
acaaaaagtgaaggggaatcgcccagtaagaagtcgtccaaacctttgtgtaagtatggt
aaagactgttaccagaccaaccctgcacatatagagcagtactaccatccaacagacgac
aaactacccaaaccaggggagagattaccaaatgtattttctggctcaaagatttttctg
tctgaagacacagataattatagactgttgaagcgctacatcattggatttgatggtgat
ttagtgaacgattaccagaagaaaacagcaacacatgtgattgtaaaaccaggagaggcg
atcctgacctctggtgtctgtgtcacggtcgattggctctggagcagcatcaagaagaag
acaaagttaccgtcacacaaattcagggtgacgtga

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