Argopecten irradians (bay scallop): 138320575
Help
Entry
138320575 CDS
T10542
Name
(RefSeq) contactin-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138320575
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
airr00537
]
138320575
Cell adhesion molecules [BR:
airr04515
]
Immunoglobulin superfamily
Contactins
138320575
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
airr00537
]
Others
138320575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set
Motif
Other DBs
NCBI-GeneID:
138320575
NCBI-ProteinID:
XP_069119738
LinkDB
All DBs
Position
4:10575276..10591915
Genome browser
AA seq
1135 aa
AA seq
DB search
MATGDLQWKGDGTRIQQADQYWLNVQEMFKPGLHIVYTYAVTGYLWGREAESSQIPYICE
ISMNEAYRITQTHRDYDYGTAFRDPALAPRGPDMIIQPVSLVAVSTAASASFECVATGNP
APTYTIVFIDNENNRTVISPEADSRYTVTNGKVTIQYPDERNDSGTYQCIAENSFGAILG
NTMHFTFGSLGSFSNVDREPVTAFSHESAQINCVPPIHKPAVTYQWLRWRTGSYVRPDLT
PYIFISRNGKLYFSVVSKEDEDEYFCIVELTSNNGAAIGTNQPPSRTSRPILLNVIQQVE
TLWGPEIGNDFPAVFPARPVRGQNVYLECLAYGSMTIEYSWTRQLLPLPTTVKSLDHNRV
LMIEGAQIEDSGTYTCHASRGSSVRVSKSLTINIEAKPFFSFPLGDQHVDIGSQLTWRCE
AKALPTPTYAWYKNGVRITSVPGEITIAKNVMLINNLDPVKHNGMYQCSATNVYGEVFTE
GQLRVLAFPPSFVKKPVEERMFAAIGGNATIICDPEAAPFPTFTWRKNGVDLGLNHGDTT
SRVRMLQNGNLFIQNVGQGDAGAYMCSAENTYGSASSAGVLDVTSSTVINIAPQPTSVHV
NNTAFLTCTASASTDIEFVQTWNYNGKSIDLKDNLHYSLGTSQNVQGLYVRLAQLKHAGD
YECVVMTTMDISRATARLTVLGPPGPPAGVYADPTTITTTSMRIKWSVGALNGLPIDFYM
IEGKTEKEHTWTVIIPFISDVDTIVPTSDKHNVDVPGLKSGVGYMFRVSAANSLGIGQPS
KPSDIFQTLPAAPSVAPKEVGGGGGSVGDLTLTWMPLTEEEWGGSVVSYIVYWRRLGSVG
DSAWARPKYDIPADVGKYVQTVGQELYYTQYEVKVQAVNSFGKGPNSTIAIVYSAEDLPI
AVTTNVRAWRENCTSILVMWDPIPDEREIMRGRLMGYQVNYFERNDSEPIINSISWRTSD
PQGLVIGLLPYTWYTFDVQVLNTAGMGQISEKFHQRTYQNAPILYPTEVYVHSHGVNSVL
VKWRGVSTGVYEEPLQGFKIRYWLSNDDIRTAKDVVVGKVDEAVIYGLEKNNLYKLRVLG
YSQGGDGNLGDTIYFTLGGMVYVDPSVSEIRASSQQIKSFFLVLVLNVVLTLVMI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggagacttacaatggaagggggacgggacaaggatacaacaggcggaccag
tactggcttaatgtccaggaaatgttcaaacctggtctccacatcgtatacacgtacgcg
gtaactggatacctttggggccgcgaagcggaatcgtcacaaattccatacatttgcgaa
atcagtatgaacgaagcctaccggataacacagactcatcgggattatgactacggaaca
gcgttcagggaccctgcactggctcctcgaggcccagacatgattatccagccagtcagt
ttagtagcagttagtacagctgccagtgcaagttttgagtgcgttgccaccgggaatcct
gcacctacatacactattgttttcattgacaacgaaaacaaccgaactgtaatatcaccg
gaagctgactcgaggtacacagtaactaatggaaaggtaaccatacagtatccggatgag
agaaacgattctggaacgtaccaatgcatcgccgagaatagtttcggggctattttagga
aacacaatgcatttcacatttgggagtctcggaagtttctctaatgttgacagagagcct
gttaccgccttttctcatgagagtgcccaaataaactgtgtaccgccaatccacaaacca
gctgtgacgtaccagtggctgaggtggaggacagggtcctacgtccgcccagatctcacc
ccttacatcttcatctcacggaacggcaagctgtatttctcggtcgtgtctaaggaggac
gaggacgaatacttctgtatcgtagagctgacttccaataacggagccgccatcggtacg
aatcagccgccgagtagaacaagccgtccaatcctgctcaatgtcatacaacaagtggag
acactttggggtccggagattggtaatgactttcctgctgtctttcccgctcgaccagtg
agaggacagaacgtttacctggagtgtctagcctacggcagcatgacgatcgagtactcc
tggactcggcagttacttcccctaccaactacagttaagtcattagatcataaccgagtc
ttgatgatagagggcgcacaaatcgaggacagcggcacctacacgtgtcatgcatctaga
ggctctagtgttagggtgtccaaatccctaactatcaatattgaagcgaagccattcttc
agcttccccctaggtgaccaacacgtagacatagggagccaactgacgtggcgatgtgag
gccaaggcactaccaacaccgacgtacgcctggtacaaaaatggtgtcaggatcacgagt
gtcccaggagagataacgatcgccaaaaatgtcatgttgataaacaacctggaccctgtg
aaacataacgggatgtaccagtgttcagcaacaaacgtgtacggagaggtgttcactgag
ggacagttacgggtgcttgcgttcccgccatcattcgtgaaaaaaccagtggaggagaga
atgtttgcagcaataggcggaaatgctactataatatgtgatccggaggctgcgccgttt
ccgacatttacatggcggaaaaatggtgtcgacctcggcctgaaccatggcgacacgacg
tcacgtgtccggatgttacagaacggcaacctgttcatacagaatgtgggacaaggtgac
gcaggggcttacatgtgttcagcagaaaatacctacgggtctgcttctagcgccggagta
ttggacgttacatcaagcacggtgatcaatattgcaccacagccaacatcagtgcacgtg
aacaacacggctttcctcacgtgtacagcctctgcatcaactgatatagaattcgttcag
acatggaactataatggaaagtcaattgatcttaaggacaacctacactattcattggga
acatcacaaaatgttcagggtctatacgtacggctagctcaactcaagcatgcgggggac
tatgaatgtgtcgtcatgacaaccatggacatatcacgtgctaccgctcggctgacagtt
ttaggccctccaggaccacccgccggcgtgtatgctgaccctacgactattaccacaact
tccatgaggattaaatggagtgtaggagctttgaacggccttcctattgacttttatatg
atagaaggaaaaacagaaaaggaacacacttggacagttataataccatttattagtgac
gtcgataccatcgtacctaccagtgacaaacacaacgttgatgtcccaggtctgaagtcc
ggcgtgggatacatgtttcgtgtgtccgcagccaactcgctagggatcgggcagcccagc
aaaccgtcagatatattccaaacgctaccggccgctccatcggtcgccccaaaagaagtg
ggaggaggagggggaagtgtaggggacctcacgctcacctggatgcccctgacagaggag
gagtggggtggttctgtggtgtcatacatcgtctactggcgccgcctggggagtgtaggt
gattcggcatgggcgaggccaaagtatgatattcctgctgatgtagggaaatatgttcaa
accgttggacaggagctctattatacacagtatgaggttaaagttcaggcagtcaacagt
tttggaaaggggccgaactctaccatcgctatagtatattcagctgaggatttgcctatt
gccgtgacgacaaacgtgagagcttggcgggaaaactgcacatcaatcctagtgatgtgg
gaccccattccggatgaaagggagataatgcgaggcagattgatgggataccaggtgaat
tattttgagaggaatgattcagagccaatcattaattcgatcagctggcggacgtccgac
ccccaggggctcgtgataggtcttctaccttatacgtggtacacctttgatgtccaggtc
ctcaacacggcggggatggggcagatcagtgaaaagttccatcaacggacctaccaaaac
gctcctatactttaccctaccgaggtgtacgtacattcacacggagtgaacagtgtgctg
gtgaaatggcggggggtatcgactggagtgtatgaggaacctctccagggatttaagata
aggtactggttgagtaatgatgacatacggaccgctaaagatgtcgtcgtggggaaagta
gacgaagccgttatttacgggttggagaaaaataatctctacaagttaagagtacttggt
tacagtcaaggaggagatggtaatctgggtgacaccatttatttcactcttggtgggatg
gtgtacgtagatccgtcagtgtctgagatcagagcttcttctcaacaaataaaatcattc
ttcctagttctggtactaaacgtcgtattgacgttagtgatgatatga
DBGET
integrated database retrieval system
