Argopecten irradians (bay scallop): 138320598
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Entry
138320598 CDS
T10542
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr00450
Selenocompound metabolism
airr00970
Aminoacyl-tRNA biosynthesis
airr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
138320598
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138320598
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
airr01007
]
138320598
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
airr03016
]
138320598
Enzymes [BR:
airr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
138320598
Amino acid related enzymes [BR:
airr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138320598
Transfer RNA biogenesis [BR:
airr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138320598
Prokaryotic type
Other AARSs
138320598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
GST_N_5
tRNA-synt_1
CysS_C
tRNA-synt_1e
GST_C
Anticodon_1
GST_C_2
Motif
Other DBs
NCBI-GeneID:
138320598
NCBI-ProteinID:
XP_069119784
LinkDB
All DBs
Position
4:complement(11341725..11369381)
Genome browser
AA seq
1032 aa
AA seq
DB search
MKLHTNSGNFNSLKILAAAELSGTKLEVVERKHDDKVVSYLTRSSLPVLEVSPNKFLFSA
GAATRFLLSQQSLSQEDESVVDRWLEWDSNQLQPLLVPYLVTAIGQNKQDASLLSQLQAL
LKLLNTELKGHQTLTKAGITGGDITLWGSLYPIFKPGKALIKGWEGLYPNIKVWFTGVET
EPAVQKSISVVVNGKDTGVFKESLLAQPLPLSPPIPSGLKPEKAAADTNKKQQGKSKSEK
MDTESAESQILAARPVTPEELAAAVKAWNSGKSSCPKFRERVHPILPQEGERNIMITSAL
PYVNNVPHLGNIIGCVLSADVFSRYCRLRNYNVFYICGTDEYGTATETKAIEEGLTPQQI
CDKYNKIHSGIYKWFNIDFDYFGRTTTTQQTQIAQDIFWKLYNQGHILKESMEQLRCEKC
NRFLADRFVEGTCPLCQFEDARGDQCDACGKLINAVELRFPKCKLCKATPVIKSSEHLFL
DLPKMEPSLQKHLDSVFSTGTWTSNAKNITNSWIRDGLKPRCISRDLKWGTQVPLEGYTD
KVFYVWFDAPIGYISITANYTDQWEKWWKNPEQVEMYNFLGKDNVPFHSVIFPCTLLGAN
DNYTMVNHMVATEYLNYEEGKFSKSRGTGVFGNNAKDTGIPADIFRFYLLYVRPETQDSS
FSWDDFLLKNNSELLNNLGNFINRALMFINNNFGGTIQEMLLTDEDNQLLAHVTRELCTY
IENMEQAKIRDSIRNILSISRLGNQFMQANKPWVLVKGSDSDKKRAGSVVSLAANISCLL
SVLLQPYMPATSDTIQQQLNSPKEANVVHTEFLCHLSPGHKIGQPSPLFEKIATAKVDEW
KKLYAGQPAPVKKETKPSKPTGGAAGASGPSDPAEVARLTDEVAKQGSVVRDLKTKKADK
SEIDAQVAKLLDLKKQLALAQGQDAAPAAGGNKKKDKKAAKQPSSGQGSGPTANGTSPAS
SGQESSPEVVCLTEEVAKQGNVVRDLKGKKADKSQIDGEVAKLLDLKKQLALAQGQDPEA
AVGGGKKKGKKK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcacacaaattctgggaattttaattcattgaaaatactggcagcagctgaa
ctatcaggaaccaaactagaagttgtggagagaaaacatgacgataaagtggtatcctac
ttgactagaagttccttgcctgtactagaagtctcccccaacaaatttctcttctcggct
ggagcagccacgagatttctgctgagtcagcagtcactgagccaggaggatgagagtgta
gtggatagatggctggagtgggacagtaaccagttacagccattgctggttccatatctt
gtgactgctattggccagaacaaacaagatgcctccctcttatcacaactacaggcctta
ctcaaactcctcaacactgagcttaaaggtcaccagactcttactaaggctgggataacg
ggaggggacataactctctggggttcactgtatcctatctttaaaccaggcaaggcgctc
atcaaaggttgggagggtctgtacccgaacatcaaggtgtggtttacaggtgtggagaca
gagccagcagtacagaagtctatatctgtggtggtcaacggcaaagataccggtgtgttc
aaggagtccctgttggcccagccccttcctctgtcccctccaattccttcaggcctcaaa
ccagaaaaggcagcagctgacaccaacaagaaacagcaagggaagagcaagtctgagaaa
atggacactgaatcagctgagagtcagatactggcagccagacctgtaaccccagaggag
cttgctgctgctgtaaaagcatggaactctgggaaaagttcatgtccgaagttccgagaa
agagttcaccctatcctaccccaggagggtgagaggaacatcatgatcaccagtgccttg
ccttatgtaaacaacgtacctcacctaggaaacatcatcggttgtgtcctcagtgccgac
gtcttctccagatactgccgactgcggaactacaatgtgttttacatctgcgggactgat
gagtatggcaccgccacagaaaccaaggccatagaggaaggtctaacaccacagcagatc
tgtgacaagtataacaagatacacagcggtatctacaaatggttcaacatcgactttgat
tactttggtcgaaccaccacaacccagcaaacacaaattgcccaggatatattttggaag
ctgtacaaccagggccacatcctgaaggagtctatggagcagttacgctgtgagaaatgt
aatcggttcctagctgacaggtttgtggagggcacctgcccactttgtcagtttgaagat
gcccgtggtgaccagtgtgacgcctgtgggaagcttattaatgctgtggaactcaggttt
cccaaatgtaaactgtgcaaggcaacaccagtcatcaagtcttcggagcacctgtttctg
gacctacccaagatggaaccatctctacaaaaacacctggacagtgtgtttagtacagga
acatggacaagcaatgctaaaaacatcacaaatagctggatcagggacggacttaaacct
cgctgtatcagtcgagatctaaaatggggtacacaggtgcccttggaggggtacacagac
aaggtgttctatgtgtggtttgatgctcctataggctacatctcaatcacagccaactac
acagaccagtgggagaagtggtggaaaaacccagaacaggtggaaatgtacaattttctg
ggtaaagacaatgttccatttcactctgtcatcttcccatgtaccttgcttggagcaaat
gacaactataccatggtcaatcatatggttgctacagaatacttgaattatgaggaaggg
aaattttcgaagagtcggggaacaggagtgtttggtaacaatgccaaggacacaggaatc
ccagctgatattttcagattctacctactgtatgtgcgaccggaaacacaggacagcagt
tttagctgggatgacttcttactgaaaaacaacagtgaacttttgaacaaccttggcaat
ttcatcaacagggcccttatgtttataaacaataactttggtggaaccatacaggaaatg
cttctaactgatgaggataatcagcttctggcccatgtcacacgagagctttgcacttac
atagaaaacatggagcaggcaaagatcagggattccatcaggaacattctgagtatctct
cgccttggtaaccagttcatgcaggccaacaaaccatgggtgcttgtcaaaggcagcgac
tccgacaaaaagcgtgccgggtcggtcgtcagtttggctgctaacatctcatgcctgctg
tctgtcttactacaaccgtacatgccagcgaccagtgataccatccaacagcagcttaac
tctcccaaggaggctaatgttgtccacacagagtttctgtgtcatctctcacctggtcac
aagattgggcagccaagtcctttgtttgagaagatagccactgcaaaggttgacgaatgg
aaaaaactgtatgctggacagccagcaccagtgaaaaaggaaaccaaaccttctaagccg
acaggtggtgctgctggagctagtggaccaagtgacccagcagaagtagcaagacttaca
gatgaggtggcgaaacagggatcggttgtgagggacttaaaaactaagaaggctgataaa
agtgagattgatgctcaagttgccaagttacttgacctgaaaaaacagctggcactcgct
caaggtcaagatgctgcccctgctgctgggggtaacaaaaagaaagataagaaagctgcc
aaacagccaagcagtggtcaaggcagtggacctacagccaatggaacatcaccggcttca
agtggacaggagagttcaccagaggttgtctgcctgacagaagaggttgctaaacaggga
aatgtggtgagagatttgaaaggaaagaaagcggacaagagtcaaatagatggagaagtc
gctaaacttcttgatctgaaaaaacagttggctttggctcaaggtcaggacccagaggca
gctgtagggggaggtaaaaagaagggcaagaagaagtga
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